ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-8.PDB
Scoring matrix: MYO5_1YP5-8_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.41
Foldx random average score for Saccharomyces cerevisiae: 10.881

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213509
Proteins after random average filtering: 7178
 Total fragments: 1307853
Proteins after disorder filtering: 4450
 Total fragments: 69068
Proteins after pattern filtering: 2228
 Total fragments: 14251
Proteins after MINT filtering: 42
 Total fragments: 1017

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

13.41

1.39

0.00

Best peptides

RWPPMMER

0.00

-1.38

-2.77

         
Interactors      
P53145

LLPPLPGQ

6.97

-1.49

-2.88

PNEPLLPP

7.50

-4.46

-5.85

NEPLLPPL

8.31

-2.44

-3.83

P39113

APPPPPHK

6.39

-2.85

-4.24

PPPPHKDH

6.43

-2.48

-3.87

PRRPQKNR

7.59

-4.40

-5.79

P40073

GYPQQQPS

10.44

-1.60

-2.99

YPQQQPSH

10.58

-2.37

-3.76

P25604

LKPPLPPP

4.82

-5.02

-6.41

PKPKSPHL

6.76

-1.32

-2.71

QAPSLPPK

7.31

-4.07

-5.46

P25623

TKPLPVEP

6.58

-1.94

-3.33

SQPPLQPQ

7.47

-1.72

-3.11

TPPLPPHA

7.51

-1.62

-3.01

Q05933

TLPGTPGF

8.15

-4.25

-5.64

RGPAYPSN

9.49

-1.62

-3.01

TFPVDPNT

10.18

-0.50

-1.89

P53094

CYPLKLPP

6.50

-5.20

-6.59

PPPPCPAM

7.27

-3.25

-4.64

KLPPLPLT

7.59

-2.63

-4.02

Q12451

APPPVPNE

6.13

-4.00

-5.39

LLPWLPPT

7.58

-1.88

-3.27

HLLPWLPP

7.72

-3.32

-4.71

P15891

AQPPLPSR

4.98

-4.44

-5.83

APPPPPRR

6.33

-3.30

-4.69

PKPEVPED

6.33

-1.94

-3.33

P48562

QAPKRPDA

6.08

-3.70

-5.09

LNPYRPHH

6.27

-2.82

-4.21

PKPPISAP

6.38

-2.74

-4.13

P40341

PKPPLNDP

4.21

-4.86

-6.25

PPPPKPPL

6.46

-3.81

-5.20

IPPPPPPP

7.02

-3.73

-5.12

Q08912

PPPPPPDE

5.03

-1.78

-3.17

GPPPPPPP

6.99

-3.75

-5.14

PPPPPDEK

7.26

-1.70

-3.09

P17555

GPPPRPKK

5.98

-3.90

-5.29

PPPPPPAP

7.41

-3.44

-4.83

PRPKKPST

7.73

-2.09

-3.48

Q12342

APPPPPPP

6.96

-3.75

-5.14

PPPPPPPP

7.05

-4.44

-5.83

KAPPPPPP

7.77

-2.74

-4.13

P47068

PLPPVSEE

6.38

-1.41

-2.80

LPEPISPE

7.46

-1.56

-2.95

TAPPLPRA

7.66

-3.76

-5.15

P38822

PAPEVPPP

7.60

-3.93

-5.32

APEVPPPR

8.03

-3.57

-4.96

GPAPEVPP

10.07

-1.91

-3.30

P04050

PPPVRPSI

6.82

-3.36

-4.75

CLPVPPPP

7.92

-3.95

-5.34

PPPPVRPS

7.95

-1.48

-2.87

P40450

APPPLPDL

4.98

-3.42

-4.81

PPPPLPES

5.34

-3.32

-4.71

PPPPPLPE

6.05

-1.81

-3.20

P40453

KPPDLPIR

5.76

-4.79

-6.18

IPPPLPPK

6.03

-5.51

-6.90

SMPTTPEI

6.63

-0.15

-1.54

Q12168

GPPPLPPR

4.52

-4.86

-6.25

IPPPVPNR

6.02

-5.45

-6.84

DDPYFPQF

7.58

-3.73

-5.12

P41832

PAPPMMPA

6.33

-3.52

-4.91

PPPPMALF

6.42

-3.16

-4.55

PPPPPPPM

6.79

-3.49

-4.88

P36006

IPPPPPPM

6.77

-3.13

-4.52

ANIPIPPP

6.83

-5.18

-6.57

PKDPKFEA

6.87

-3.60

-4.99

P38753

SNLPIQHP

7.19

-3.21

-4.60

NTPVMPPQ

8.32

-1.02

-2.41

ISPPVPGP

8.49

-1.94

-3.33

P38237

QIPSKPEN

7.24

-2.01

-3.40

FQIPSKPE

7.73

-0.49

-1.88

PPPNVPKK

7.93

-3.45

-4.84

P34245

PWPGPAEC

6.30

2.56

1.17

GPWPGPAE

9.05

-0.93

-2.32

PFGPWPGP

9.70

-2.46

-3.85

Q01389

SPPPIPKT

6.78

-2.82

-4.21

EAPTKPNP

7.39

-3.81

-5.20

SRPVPPDS

7.64

-1.14

-2.53

Q03306

PPLPQMEF

6.46

-2.89

-4.28

TKPNVPPL

7.43

-2.56

-3.95

PSPPLPQM

7.62

-4.66

-6.05

P34758

LPPPPPPR

6.16

-3.75

-5.14

QQPQHLPP

6.93

-2.66

-4.05

HLPPPPPP

7.38

-1.26

-2.65

P53933

APPPLPNR

5.00

-5.19

-6.58

PPPPIPST

6.72

-3.01

-4.40

RPPPPPIP

7.63

-3.69

-5.08

P32381

TEPPMNPL

7.91

-1.75

-3.14

Q00453

APPYFPHP

4.42

-3.62

-5.01

APIPLPHQ

6.07

-4.35

-5.74

QPPPLPIY

6.89

-3.92

-5.31

P40021

PPPPLPPP

5.46

-5.10

-6.49

GPPPPLPP

6.70

-3.16

-4.55

LPPPLFPS

6.77

-2.88

-4.27

Q12446

APPPPPHR

4.92

-3.32

-4.71

PPPPRRGP

5.61

-4.38

-5.77

FPFPIPEI

5.84

-4.28

-5.67

Q01560

PQPYYPPP

6.38

-3.40

-4.79

YPPPPPGE

6.40

-1.96

-3.35

PPPPGEHM

7.09

-1.05

-2.44

P00950

PPPPIDAS

7.76

-2.27

-3.66

VPPPPIDA

8.60

-1.25

-2.64

SFDVPPPP

10.44

-2.11

-3.50

P53735

VPPPPRTR

7.02

-1.88

-3.27

PAPKLVPP

7.68

-3.11

-4.50

APKLVPPP

8.18

-4.49

-5.88

P33334

PPPPGLDE

5.14

-1.41

-2.80

PPPPGFEE

5.34

-0.65

-2.04

KMPTRFPP

5.48

-5.40

-6.79

P40523

VPPLAPPP

7.68

-3.40

-4.79

LAPPPHGP

7.98

-0.63

-2.02

APPPHGPF

8.12

-1.93

-3.32

P40563

VTPKVPER

6.83

-2.08

-3.47

APPPVPKK

7.20

-4.04

-5.43

PPPVPKKP

7.87

-4.11

-5.50

Q08989

PPPPPPDE

5.03

-1.78

-3.17

GPPPPPPP

6.99

-3.75

-5.14

PPPPPPPP

7.05

-4.44

-5.83

P37370

SAPPIPDI

5.57

-3.91

-5.30

SAPPIPGM

5.90

-3.62

-5.01

VPQNRPHM

6.00

-4.77

-6.16

Q03900

HLPNTPSG

8.55

-3.30

-4.69

 


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