ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-23.PDB
Scoring matrix: MYO5_1YP5-23_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 11.92
Foldx random average score for Saccharomyces cerevisiae: 9.243

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3220687
Proteins after random average filtering: 7178
 Total fragments: 1514185
Proteins after disorder filtering: 4748
 Total fragments: 81740
Proteins after pattern filtering: 2182
 Total fragments: 12508
Proteins after MINT filtering: 43
 Total fragments: 1012

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

11.92

-0.52

0.00

Best peptides

YPRIPWM

0.00

-3.44

-2.92

         
Interactors      
P53145

EPLLPPL

6.22

-3.24

-2.72

PLLPPLP

6.33

-6.41

-5.89

PPLPGQP

7.09

-4.05

-3.53

P39113

PRRPQKN

5.90

-1.76

-1.24

GPRRPQK

6.24

-2.49

-1.97

APPPPPH

6.71

-1.76

-1.24

P25604

PPLPPPP

6.15

-5.81

-5.29

SSPHSIP

6.15

-0.89

-0.37

PPLPPKP

6.21

-4.98

-4.46

P25623

TPPLPPH

5.32

-1.47

-0.95

KPLPVEP

6.19

-4.09

-3.57

SDTPPLP

6.82

-2.25

-1.73

Q05933

STFPVDP

7.37

-2.67

-2.15

TFPVDPN

7.72

-1.77

-1.25

FTLPGTP

8.10

-4.76

-4.24

P53094

LKLPPLP

5.61

-5.30

-4.78

YPLKLPP

5.64

-3.98

-3.46

VPLPPQT

6.97

-3.52

-3.00

Q12451

PHLLPWL

4.60

-5.36

-4.84

HLLPWLP

7.03

-3.96

-3.44

APKHAPP

7.30

-1.29

-0.77

P15891

SAAPPPP

6.82

-2.59

-2.07

PPLPSRN

7.09

-4.54

-4.02

PPPPPRR

7.21

-3.32

-2.80

P48562

APRPPSS

5.75

-2.25

-1.73

FPRGPMH

5.82

-2.34

-1.82

SPLNPYR

5.95

-2.42

-1.90

P40341

RNIPPPP

5.90

-3.03

-2.51

IPPPPPP

6.97

-2.43

-1.91

PPPPPPP

7.44

-2.45

-1.93

Q08912

KGPPPPP

7.16

-3.93

-3.41

PPPPPPP

7.44

-2.45

-1.93

TPSWGPS

7.72

-0.63

-0.11

P17555

PPRPKKP

4.84

-2.62

-2.10

SGPPPRP

6.23

-2.05

-1.53

TAAPAPP

7.25

-1.59

-1.07

Q12342

KAPPPPP

7.02

-3.75

-3.23

PPPPPPP

7.44

-2.45

-1.93

APPPPPP

7.46

-3.24

-2.72

P47068

LPRAPPV

6.55

-2.17

-1.65

PPLPRAP

6.70

-4.55

-4.03

SAPPVPP

6.78

-1.75

-1.23

P38822

APEVPPP

7.77

-2.71

-2.19

PEVPPPR

8.18

-3.35

-2.83

P04050

TCLPVPP

6.16

-4.08

-3.56

PVRPSIS

6.17

-1.88

-1.36

SPAYSPK

6.69

-0.91

-0.39

P40450

PPLPESL

6.24

-5.32

-4.80

SPKLFPR

6.31

-3.32

-2.80

PPLPDLF

6.55

-0.74

-0.22

P40453

RKRPPPP

3.71

-4.12

-3.60

TPEIPPP

5.64

-2.98

-2.46

PEIPPPL

5.89

-2.48

-1.96

Q12168

PPLPPRA

6.71

-5.29

-4.77

PNRPGGT

6.80

0.66

1.18

RGPPPLP

6.82

-3.68

-3.16

P41832

TPPPPPL

5.57

-2.08

-1.56

PPAPPMM

6.38

-4.06

-3.54

SPAPPPP

6.49

-2.52

-2.00

P36006

IPIPPPP

5.73

-2.50

-1.98

PPPPPPM

6.61

-3.21

-2.69

IPPPPPP

6.97

-2.43

-1.91

P38753

SPPVPGP

6.56

-2.37

-1.85

TPVMPPQ

7.10

-2.43

-1.91

YPSNLPI

7.98

-1.78

-1.26

P38237

FQIPSKP

7.02

-5.74

-5.22

DPFVPPP

7.08

-2.24

-1.72

PPNVPKK

8.26

-3.61

-3.09

P34245

TPFGPWP

7.52

-1.59

-1.07

YSTPFGP

7.89

-1.46

-0.94

FGPWPGP

7.95

-1.97

-1.45

Q01389

PSRPVPP

5.21

-2.58

-2.06

KPLPPQL

5.24

-5.74

-5.22

SSPPPIP

6.14

-2.52

-2.00

Q03306

PFRIPSS

5.48

-2.42

-1.90

SPPLPQM

5.53

-3.33

-2.81

TPSPPLP

6.05

-3.24

-2.72

P34758

QHLPPPP

6.31

-4.32

-3.80

LPLEPLK

6.89

-3.23

-2.71

LPPPPPP

6.96

-2.91

-2.39

P53933

RRRPPPP

3.65

-4.38

-3.86

RRPPPPP

6.65

-3.15

-2.63

RPPPPPI

6.65

-2.99

-2.47

P32381

TEPPMNP

7.24

-2.38

-1.86

EPPMNPL

7.91

-2.57

-2.05

Q00453

YFPHPMP

5.10

-2.67

-2.15

SAPIPLP

5.57

-3.46

-2.94

APIPLPH

5.88

-1.63

-1.11

P40021

PPLPPPL

5.72

-5.59

-5.07

TGPPPPL

6.04

-2.38

-1.86

SPPLPPP

6.09

-3.49

-2.97

P36150

VVNPSSP

9.09

-1.91

-1.39

Q12446

NNRPVPP

5.52

-3.17

-2.65

RPLPQLP

5.61

-4.37

-3.85

FPIPEIP

5.92

-5.71

-5.19

Q01560

YYPPPPP

6.29

-2.31

-1.79

YPPPPPG

7.01

-1.80

-1.28

QPYYPPP

7.20

-1.50

-0.98

P00950

DVPPPPI

7.65

-1.26

-0.74

VPPPPID

7.77

-2.41

-1.89

FDVPPPP

7.95

-4.05

-3.53

P53735

PKLVPPP

6.38

-4.04

-3.52

LVPPPPR

7.54

-3.97

-3.45

KLVPPPP

7.67

-4.57

-4.05

P33334

TFLPPPP

5.03

-4.39

-3.87

SGLPPPP

5.21

-2.98

-2.46

LALPPPP

6.00

-4.94

-4.42

P40523

SPRNPDT

5.34

-1.31

-0.79

TPLPTPV

5.82

-3.14

-2.62

TPQPPSA

7.49

-1.94

-1.42

P40563

TPKVPER

6.33

-2.96

-2.44

TPNVPTR

7.46

-2.63

-2.11

SEPPTPA

7.49

-1.10

-0.58

Q08989

KGPPPPP

7.16

-3.93

-3.41

PPPPPPP

7.44

-2.45

-1.93

GPPPPPP

7.85

-3.22

-2.70

P37370

QNRPHMP

4.57

-4.56

-4.04

TSIPSPP

5.56

-4.04

-3.52

SSIPLAP

5.94

-1.54

-1.02

P39743

SNPLTSP

7.53

-3.07

-2.55

TIPEDNP

8.93

-0.60

-0.08

Q03900

SHLPNTP

6.64

-3.97

-3.45

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER