ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1YP5-18.PDB
Scoring matrix: MYO5_1YP5-18_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 15.31
Foldx random average score for Saccharomyces cerevisiae: 15.276

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199153
Proteins after random average filtering: 7178
 Total fragments: 1787643
Proteins after disorder filtering: 4599
 Total fragments: 114306
Proteins after pattern filtering: 2257
 Total fragments: 17466
Proteins after MINT filtering: 44
 Total fragments: 1044

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAAA

15.31

1.80

0.00

Best peptides

RPPIPGRHMW

0.00

-4.97

-6.77

         
Interactors      
P53145

LPPLPGQPPL

6.18

-3.77

-5.57

NEPLLPPLPG

9.12

-1.43

-3.23

LPGQPPLINI

10.48

-1.53

-3.33

P39113

GPRRPQKNRY

9.32

0.41

-1.39

ASHRGPRRPQ

9.51

-0.02

-1.82

RGPRRPQKNR

9.85

-1.53

-3.33

P40073

FDGYPQQQPS

11.53

-0.03

-1.83

P25604

KPKSPHLKPP

8.96

-0.13

-1.93

KPPLPPPPPP

8.98

-3.87

-5.67

LPPPPPPQPA

9.23

-1.58

-3.38

P25623

LPPHATPKNV

9.19

-2.41

-4.21

QPPLQPQSKT

9.26

-2.00

-3.80

PPLPPHATPK

11.50

-0.50

-2.30

Q05933

FPVDPNTDRM

9.34

-0.31

-2.11

TKFRGPAYPS

9.40

-0.02

-1.82

NFTLPGTPGF

11.01

-2.10

-3.90

P53094

YPLKLPPLPL

6.29

-2.71

-4.51

AFPQSPIRAY

9.54

0.12

-1.68

LPPLPLTSDS

9.71

-3.16

-4.96

Q12451

QPHLLPWLPP

9.17

-1.72

-3.52

LPWLPPTDTR

10.34

-0.19

-1.99

PHLLPWLPPT

11.52

-1.49

-3.29

P15891

RRATPEKKPK

6.86

-0.26

-2.06

KPEVPEDEPE

8.76

-1.34

-3.14

APPPPPRRAT

9.53

-0.81

-2.61

P48562

KPPISAPRAP

7.85

-2.23

-4.03

NPYRPHHNMI

7.86

-1.51

-3.31

PPISAPRAPY

8.68

-0.09

-1.89

P40341

KPPLNDPSNP

9.81

-3.23

-5.03

PPKPPLNDPS

11.03

0.25

-1.55

PPLNDPSNPV

11.03

-0.09

-1.89

Q08912

TPSWGPSPMG

10.34

-1.36

-3.16

VCYTPSWGPS

11.43

-0.04

-1.84

YTPSWGPSPM

11.66

0.48

-1.32

P17555

RPKKPSTLKT

6.70

-2.96

-4.76

GPPPRPKKPS

9.95

-0.06

-1.86

SKSGPPPRPK

10.95

0.17

-1.63

Q12342

RKAKAPPPPP

11.37

-2.42

-4.22

TPSTPSDGGS

12.09

-0.78

-2.58

APPPPPPPPP

13.68

-1.06

-2.86

P47068

MPNTAPPLPR

6.38

-1.33

-3.13

SRTLPPHVPS

8.92

-1.70

-3.50

DPSSNPFFRK

9.14

0.29

-1.51

P38822

APEVPPPRRS

7.98

-1.25

-3.05

GPAPEVPPPR

13.45

-0.43

-2.23

VGDTPTTTPG

14.03

0.73

-1.07

P04050

SPTSPGYSPG

8.85

0.35

-1.45

SPGSPAYSPK

9.80

0.15

-1.65

SPTSPSYSPT

10.17

-0.06

-1.86

P40450

PPPLPDLFKT

8.06

-0.45

-2.25

SPKLFPRLSS

8.64

-1.07

-2.87

LPQLPPPPPP

9.48

-4.26

-6.06

P40453

PPDLPIRLRK

8.00

-1.47

-3.27

TPEIPPPLPP

9.03

-2.21

-4.01

MPTTPEIPPP

10.18

-1.90

-3.70

Q12168

IPPPVPNRPG

8.66

-0.49

-2.29

PPPLPPRANV

8.97

-3.36

-5.16

KVQHPVPKPN

10.55

-0.26

-2.06

P41832

IPPAPPMMPA

9.53

-1.24

-3.04

PPPLPSVLSS

9.75

-1.69

-3.49

PPPPPPPVPA

11.02

-1.13

-2.93

P36006

KPKNPGGLSG

8.84

-0.23

-2.03

KSNKKPKNPG

10.76

-0.01

-1.81

GQPKDPKFEA

11.36

0.64

-1.16

P38753

TPVMPPQRQS

8.79

-1.97

-3.77

YSPYPSNLPI

9.92

0.59

-1.21

NLPIQHPTNS

11.21

-2.71

-4.51

P38237

VPPPNVPKKD

11.31

-0.01

-1.81

FQIPSKPENT

11.48

-0.14

-1.94

IPSKPENTVN

11.77

0.05

-1.75

P34245

YSTPFGPWPG

10.48

1.12

-0.68

TPFGPWPGPA

11.52

-0.17

-1.97

FGPWPGPAEC

12.26

1.08

-0.72

Q01389

SPSYPSIFRR

7.29

-0.07

-1.87

APKREAPKPP

9.37

-0.45

-2.25

SPPASPSYPS

9.49

0.30

-1.50

Q03306

NKSIPRTKPN

8.05

-0.90

-2.70

GEEKPFRIPS

10.02

-0.38

-2.18

QPTPSPPLPQ

10.29

-0.60

-2.40

P34758

QLPLEPLKPT

8.61

-2.11

-3.91

LPPPPPPRAQ

8.93

-1.80

-3.60

VPQQLPLEPL

10.14

-0.43

-2.23

P53933

YNDLPMELPH

9.68

-1.96

-3.76

KRVAPPPLPN

10.11

-0.07

-1.87

RRPPPPPIPS

10.15

-0.70

-2.50

P32381

LLTEPPMNPL

11.16

-0.26

-2.06

ILLTEPPMNP

13.18

-0.57

-2.37

Q00453

LPHQPPPLPI

7.53

-1.50

-3.30

PPYFPHPMPS

8.39

-0.75

-2.55

LPISTPASPQ

9.76

-0.91

-2.71

P40021

LPSTPSQMNY

7.19

-2.62

-4.42

SPPLPPPARS

8.39

-2.06

-3.86

NYVISPNLPT

8.96

-0.63

-2.43

P36150

PIVVNPSSPS

12.50

-0.39

-2.19

NPIVVNPSSP

13.91

-0.01

-1.81

Q12446

LPQLPNRNNR

6.47

-4.04

-5.84

SQPQSNPFPF

8.42

0.18

-1.62

LPPLPNQFAP

8.71

-3.27

-5.07

Q01560

PPPPPGEHMH

7.77

-1.31

-3.11

QPYYPPPPPG

10.36

-1.90

-3.70

EPPQAPDAPQ

10.39

-0.59

-2.39

P00950

RRSFDVPPPP

13.29

-1.47

-3.27

RSFDVPPPPI

13.36

-0.63

-2.43

DVPPPPIDAS

14.86

1.34

-0.46

P53735

APKLVPPPPR

8.78

-3.85

-5.65

PPPPRTRSPV

11.14

-0.62

-2.42

LVPPPPRTRS

11.21

-0.80

-2.60

P33334

LPPPPPPPPG

10.04

-2.88

-4.68

MPTRFPPAVF

10.23

-0.35

-2.15

MSGLPPPPPG

10.78

-2.73

-4.53

P40523

YMHNSPRNPD

10.26

-0.01

-1.81

PPGTVPNMQM

10.36

0.65

-1.15

APPPHGPFST

10.95

0.37

-1.43

P40563

EPPTPAGTPN

9.56

-0.59

-2.39

APPPVPKKPS

9.80

-0.34

-2.14

KRRAPPPVPK

10.34

-0.73

-2.53

Q08989

PPPPPDEKGR

11.24

-0.73

-2.53

PPPPDEKGRG

11.73

-0.68

-2.48

PPPPPPDEKG

12.18

0.24

-1.56

P37370

RPHMPSVRPA

4.95

-5.06

-6.86

APPIPGAVPS

7.03

-2.13

-3.93

APKVPQNRPH

7.13

-1.75

-3.55

P39743

AYSNPLTSPV

12.79

1.13

-0.67

Q03900

LPNTPSGAPK

7.80

-1.47

-3.27

TPSGAPKLKN

11.91

0.75

-1.05

PSGAPKLKNY

13.94

1.06

-0.74

 


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