ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1VA7-13.PDB
Scoring matrix: MYO5_1VA7-13_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.09
Foldx random average score for Saccharomyces cerevisiae: 12.699

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213509
Proteins after random average filtering: 7178
 Total fragments: 1496636
Proteins after disorder filtering: 4643
 Total fragments: 66080
Proteins after pattern filtering: 1805
 Total fragments: 5991
Proteins after MINT filtering: 42
 Total fragments: 281

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.09

-1.56

0.00

Best peptides

WKPFFWRH

0.00

-4.56

-3.00

         
Interactors      
P53145

LLPPLPGQ

9.28

-5.85

-4.29

NEPLLPPL

11.40

-4.30

-2.74

PGQPPLIN

12.65

-4.44

-2.88

P39113

RGPRRPQK

9.34

-5.47

-3.91

SHRGPRRP

10.15

-3.57

-2.01

LFTHPEGP

10.42

-4.67

-3.11

P40073

PQQQPSHT

12.39

-5.61

-4.05

P25604

LKPPLPPP

9.59

-5.18

-3.62

HLKPPLPP

9.78

-5.84

-4.28

SLPPKPNT

10.55

-3.78

-2.22

P25623

TKPLPVEP

11.55

-5.48

-3.92

NLPKTVPI

11.76

-3.59

-2.03

ISQPPLQP

12.05

-4.54

-2.98

Q05933

KFRGPAYP

9.89

-5.66

-4.10

HSTFPVDP

10.84

-5.00

-3.44

RGPAYPSN

11.38

-3.72

-2.16

P53094

KLPPLPLT

7.44

-6.20

-4.64

LKLPPLPL

9.55

-5.44

-3.88

LNVPLPPQ

10.40

-5.39

-3.83

Q12451

LLPWLPPT

8.19

-5.60

-4.04

HAPPPVPN

9.98

-5.18

-3.62

HLLPWLPP

10.55

-3.45

-1.89

P15891

KEPVKTPS

11.09

-3.60

-2.04

RATPEKKP

12.08

-4.66

-3.10

EAAQPPLP

12.45

-5.40

-3.84

P48562

MRQAPKRP

7.48

-6.29

-4.73

LNPYRPHH

7.70

-5.97

-4.41

QFPRGPMH

8.65

-6.98

-5.42

P40341

NDPSNPVS

10.11

-1.91

-0.35

SRNIPPPP

11.69

-5.13

-3.57

RNIPPPPP

12.48

-5.64

-4.08

Q08912

HGDHPKGP

10.75

-4.63

-3.07

KGPPPPPP

11.32

-5.32

-3.76

P17555

KSGPPPRP

8.73

-5.45

-3.89

SGPPPRPK

12.24

-3.85

-2.29

PRPKKPST

12.62

-4.44

-2.88

Q12342

KAPPPPPP

11.63

-5.50

-3.94

KAKAPPPP

11.93

-5.80

-4.24

LETPSTPS

12.69

-2.20

-0.64

P47068

TAPPLPRA

9.01

-5.67

-4.11

TAPSPPPH

10.97

-5.95

-4.39

YYVPPGIP

11.22

-6.44

-4.88

P38822

PEVPPPRR

9.34

-6.55

-4.99

RGPAPEVP

11.69

-4.50

-2.94

P04050

CLPVPPPP

11.29

-6.26

-4.70

TSPTYSPT

12.23

-3.18

-1.62

YSPTSPNY

12.68

-2.85

-1.29

P40450

PKLFPRLS

8.86

-7.14

-5.58

KLPQLPPP

10.07

-5.73

-4.17

SSPKLFPR

11.71

-4.14

-2.58

P40453

LRKRPPPP

9.12

-7.05

-5.49

WKPPDLPI

10.15

-4.06

-2.50

RKRPPPPP

10.63

-5.79

-4.23

Q12168

DDPYFPQF

10.07

-4.34

-2.78

PYFPQFRS

10.23

-3.61

-2.05

NRGPPPLP

10.99

-5.16

-3.60

P41832

KGETPPPP

10.38

-5.65

-4.09

LSSQPPPP

11.26

-5.74

-4.18

SQPPPPPP

12.47

-5.14

-3.58

P36006

KKPKNPGG

10.39

-5.36

-3.80

MGQPKDPK

11.25

-4.19

-2.63

GQPKDPKF

11.72

-4.36

-2.80

P38753

NLPIQHPT

10.80

-3.03

-1.47

HISPPVPG

11.67

-4.81

-3.25

ANNTPVMP

11.85

-5.75

-4.19

P38237

NFQIPSKP

9.60

-5.79

-4.23

TFPEPEVP

11.60

-5.87

-4.31

LNDPFVPP

11.72

-3.58

-2.02

P34245

YSTPFGPW

12.62

-3.93

-2.37

Q01389

SKPLPPQL

9.13

-6.75

-5.19

KRSKPLPP

10.98

-5.26

-3.70

RYPQTPSY

11.28

-4.49

-2.93

Q03306

EKPFRIPS

10.90

-4.12

-2.56

RQPTPSPP

11.18

-4.79

-3.23

PFRIPSST

11.92

-4.97

-3.41

P34758

HLPPPPPP

9.16

-7.11

-5.55

QLPLEPLK

9.27

-7.25

-5.69

IHSQPNKP

9.80

-5.99

-4.43

P53933

RRPPPPPI

10.88

-6.75

-5.19

NDLPMELP

11.16

-2.85

-1.29

TRRRPPPP

11.32

-6.25

-4.69

P32381

LTEPPMNP

11.71

-4.12

-2.56

Q00453

LYAPPYFP

8.04

-5.73

-4.17

YFPHPMPS

9.61

-6.23

-4.67

HQPPPLPI

9.90

-5.19

-3.63

P40021

PLPPPARS

8.98

-5.45

-3.89

LDFLPSTP

9.87

-5.06

-3.50

TGPPPPLP

10.86

-5.67

-4.11

Q12446

KHSLPPLP

9.10

-6.86

-5.30

HKAPPPPP

9.32

-6.00

-4.44

NRPLPQLP

10.30

-5.31

-3.75

Q01560

HQPPEPQP

10.27

-3.98

-2.42

HHQPPEPQ

10.49

-3.69

-2.13

HQEPPQAP

10.89

-5.33

-3.77

P00950

FDVPPPPI

11.44

-5.19

-3.63

SFDVPPPP

11.56

-6.00

-4.44

P53735

LVPPPPRT

7.80

-7.08

-5.52

KLVPPPPR

9.32

-6.83

-5.27

P33334

LDNPMVPS

10.06

-3.12

-1.56

KMPTRFPP

10.72

-4.53

-2.97

MSGLPPPP

10.90

-6.43

-4.87

P40523

MHNSPRNP

10.79

-3.27

-1.71

PGTVPNMQ

10.93

-6.60

-5.04

ITPLPTPV

11.92

-4.67

-3.11

P40563

PSERPKRR

9.21

-6.00

-4.44

RRAPPPVP

10.84

-6.63

-5.07

SEVTPKVP

11.56

-4.37

-2.81

Q08989

KGPPPPPP

11.32

-5.32

-3.76

P37370

LAPPLPNT

9.31

-4.92

-3.36

HAPPLPPT

9.42

-6.32

-4.76

SQMPKPRP

9.60

-4.38

-2.82

Q03900

HLPNTPSG

10.37

-4.39

-2.83

 


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