ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1VA7-11.PDB
Scoring matrix: MYO5_1VA7-11_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.05
Foldx random average score for Saccharomyces cerevisiae: 10.510

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3220687
Proteins after random average filtering: 7178
 Total fragments: 1514030
Proteins after disorder filtering: 4747
 Total fragments: 83387
Proteins after pattern filtering: 2159
 Total fragments: 8872
Proteins after MINT filtering: 43
 Total fragments: 505

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.05

1.42

0.00

Best peptides

RMWIPPR

0.00

-4.49

-5.91

         
Interactors      
P53145

NEPLLPP

7.02

-3.43

-4.85

PLLPPLP

8.27

-4.01

-5.42

LLPPLPG

8.60

-3.02

-4.44

P39113

PLGAPPP

8.12

-4.00

-5.42

GAPPPPP

8.35

-3.85

-5.27

RGPRRPQ

8.37

-4.42

-5.84

P40073

PQQQPSH

9.37

-3.47

-4.88

P25604

PLPPPPP

7.33

-4.84

-6.25

PLPPKPK

7.43

-3.43

-4.85

PKSPHLK

7.67

-2.17

-3.59

P25623

PKTVPIS

7.72

-3.19

-4.61

PSEVPPS

7.93

-4.10

-5.51

PLQPQSK

8.84

-2.22

-3.64

Q05933

RGPAYPS

8.17

-2.91

-4.33

TFPVDPN

9.88

-1.07

-2.49

P53094

PLKLPPL

6.41

-5.10

-6.51

NVPLPPQ

7.11

-3.48

-4.89

PLPPQTR

7.21

-2.80

-4.21

Q12451

PHLLPWL

7.37

-2.16

-3.58

PKHAPPP

7.81

-4.08

-5.50

LLPWLPP

7.96

-3.35

-4.77

P15891

KEPVKTP

7.15

-3.93

-5.35

AAPPPPP

7.92

-4.07

-5.49

QPPLPSR

8.01

-2.33

-3.75

P48562

RGPMHPN

6.22

-4.12

-5.54

PSPLNPY

7.24

-2.26

-3.67

LNPYRPH

7.45

-2.38

-3.79

P40341

RNIPPPP

5.64

-6.18

-7.59

NIPPPPP

7.59

-2.90

-4.31

PLNDPSN

9.47

-3.96

-5.38

Q08912

PKGPPPP

7.64

-3.98

-5.39

KGPPPPP

7.70

-4.35

-5.76

YTPSWGP

8.97

-2.11

-3.52

P17555

PAPPPPP

7.98

-4.47

-5.88

AAPAPPP

8.15

-3.37

-4.79

PRPKKPS

9.36

-2.83

-4.25

Q12342

KAPPPPP

7.19

-4.84

-6.25

AKAPPPP

7.42

-3.93

-5.35

LETPSTP

10.05

-1.45

-2.87

P47068

TAPPLPR

6.66

-1.60

-3.02

PHPVPSA

7.29

-1.76

-3.17

DKVPPHP

7.43

-3.03

-4.45

P38822

PEVPPPR

4.91

-5.09

-6.50

PTTTPGS

9.90

-2.56

-3.98

DTPTTTP

10.42

0.70

-0.72

P04050

CLPVPPP

6.07

-4.33

-5.75

PVPPPPV

8.38

-3.37

-4.79

YSPTSPG

8.47

-2.50

-3.92

P40450

QLPPPPP

6.59

-4.15

-5.57

PKLFPRL

7.76

-3.97

-5.38

AVPPPPP

7.91

-3.32

-4.73

P40453

RKRPPPP

5.05

-6.62

-8.04

KRPPPPP

6.39

-5.03

-6.45

PEIPPPL

7.74

-4.72

-6.13

Q12168

QHPVPKP

6.19

-1.64

-3.05

DDPYFPQ

6.56

-3.00

-4.42

RGPPPLP

6.75

-4.85

-6.26

P41832

DSPAPPP

7.88

-2.24

-3.66

PAPPPPP

7.98

-4.47

-5.88

GETPPPP

8.11

-3.34

-4.75

P36006

NIPIPPP

5.62

-3.97

-5.38

PIPPPPP

7.30

-4.62

-6.04

KKPKNPG

8.56

-3.95

-5.37

P38753

PVMPPQR

6.11

-3.25

-4.67

NLPIQHP

8.04

-2.41

-3.83

PSNLPIQ

8.35

-4.12

-5.54

P38237

LNDPFVP

8.71

-1.59

-3.00

PFVPPPN

8.78

-3.59

-5.00

QIPSKPE

9.56

-1.20

-2.62

P34245

YSTPFGP

7.38

-3.29

-4.71

FGPWPGP

9.84

-3.76

-5.17

PWPGPAE

9.91

-2.56

-3.98

Q01389

REAPKPP

6.71

-5.01

-6.42

RSKPLPP

7.43

-3.08

-4.50

SKPLPPQ

7.70

-4.72

-6.13

Q03306

RQPTPSP

5.34

-6.57

-7.99

PFRIPSS

6.63

-3.52

-4.94

RLPNSAP

7.52

-2.82

-4.23

P34758

PQHLPPP

6.51

-4.83

-6.25

QHLPPPP

7.41

-1.82

-3.24

LEPLKPT

7.43

-3.83

-5.25

P53933

RRPPPPP

4.92

-6.36

-7.78

RRRPPPP

5.15

-6.04

-7.46

PGNPTSR

8.58

-0.86

-2.27

P32381

TEPPMNP

9.26

-2.67

-4.09

Q00453

YFPHPMP

5.60

-4.66

-6.08

PIPLPHQ

6.64

-4.91

-6.33

PHPMPSA

6.73

-2.85

-4.27

P40021

PLPPPAR

5.18

-4.10

-5.51

PLPPPLF

6.91

-4.14

-5.55

LNSPPLP

8.10

-2.89

-4.30

Q12446

RLPAPPP

5.29

-6.86

-8.28

NRPVPPP

6.15

-3.87

-5.29

RGPAPPP

6.46

-5.10

-6.51

Q01560

YYPPPPP

5.41

-5.56

-6.97

PQPYYPP

7.16

-3.48

-4.89

PEPQPYY

7.26

-3.85

-5.27

P00950

DVPPPPI

7.54

-2.34

-3.75

FDVPPPP

9.35

-3.39

-4.80

P53735

LVPPPPR

4.87

-3.63

-5.04

PKLVPPP

6.18

-4.80

-6.21

KLVPPPP

7.02

-4.31

-5.72

P33334

PKFEPLY

7.11

-2.80

-4.21

ALPPPPP

7.27

-4.34

-5.75

TLPPPPP

7.62

-3.83

-5.25

P40523

ITPLPTP

7.27

-3.48

-4.89

PVGVPPL

7.46

-3.71

-5.13

PLAPPPH

7.77

-4.11

-5.53

P40563

RAPPPVP

6.37

-5.39

-6.80

PSERPKR

6.53

-4.67

-6.09

PGQLPPS

8.43

-4.24

-5.66

Q08989

PKGPPPP

7.64

-3.98

-5.39

KGPPPPP

7.70

-4.35

-5.76

GDHPKGP

10.10

-1.05

-2.46

P37370

LAPLPPP

6.08

-5.04

-6.46

QMPKPRP

6.64

-4.56

-5.97

PSINPPK

7.14

-3.76

-5.17

P39743

SNPLTSP

9.99

-1.72

-3.13

PLTSPVA

10.12

-2.48

-3.90

Q03900

PSGAPKL

9.82

-2.35

-3.77

 


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