ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1VA7-1.PDB
Scoring matrix: MYO5_1VA7-1_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.59
Foldx random average score for Saccharomyces cerevisiae: 20.897

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199153
Proteins after random average filtering: 7178
 Total fragments: 1285628
Proteins after disorder filtering: 4173
 Total fragments: 53016
Proteins after pattern filtering: 2056
 Total fragments: 11866
Proteins after MINT filtering: 42
 Total fragments: 746

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

23.59

-1.97

0.00

Best peptides

RRSRRHMDRH

0.00

-6.31

-4.34

         
Interactors      
P53145

LPPLPGQPPL

19.34

-6.49

-4.52

LPGQPPLINI

19.81

-7.83

-5.86

PLPGQPPLIN

20.08

-6.77

-4.80

P39113

HRGPRRPQKN

12.10

-7.84

-5.87

RGPRRPQKNR

12.71

-4.56

-2.59

GPRRPQKNRY

12.95

-8.11

-6.14

P40073

QFDGYPQQQP

20.35

-5.26

-3.29

P25604

PKSPHLKPPL

15.49

-7.27

-5.30

PKPKSPHLKP

15.67

-6.54

-4.57

LKPPLPPPPP

16.03

-7.93

-5.96

P25623

SKTKPLPVEP

14.71

-7.16

-5.19

TKPLPVEPAS

17.42

-5.32

-3.35

QPPLQPQSKT

18.38

-6.60

-4.63

Q05933

TKFRGPAYPS

11.38

-6.11

-4.14

FRGPAYPSNS

15.60

-7.04

-5.07

FPVDPNTDRM

17.17

-6.89

-4.92

P53094

YPLKLPPLPL

15.32

-9.95

-7.98

LKLPPLPLTS

16.12

-5.96

-3.99

TREPNEPPPP

16.47

-6.85

-4.88

Q12451

PKHAPPPVPN

17.06

-7.82

-5.85

LPWLPPTDTR

17.82

-7.16

-5.19

HLLPWLPPTD

18.44

-5.16

-3.19

P15891

RRATPEKKPK

12.28

-7.67

-5.70

VKTPSPAPAA

15.75

-6.89

-4.92

SRSSAAPPPP

17.00

-7.38

-5.41

P48562

NPYRPHHNMI

12.66

-8.65

-6.68

QFPRGPMHPN

13.92

-4.45

-2.48

QRTAPKPPIS

15.04

-6.23

-4.26

P40341

SRNIPPPPPP

15.37

-8.84

-6.87

RNIPPPPPPP

18.12

-6.22

-4.25

PPPPPPPPPK

18.25

-9.52

-7.55

Q08912

PKGPPPPPPP

17.37

-8.93

-6.96

PPPPPPPDEK

17.75

-9.26

-7.29

DHPKGPPPPP

18.37

-5.68

-3.71

P17555

SKSGPPPRPK

14.34

-8.49

-6.52

PRPKKPSTLK

14.91

-7.78

-5.81

RPKKPSTLKT

15.60

-6.44

-4.47

Q12342

RKAKAPPPPP

11.92

-6.79

-4.82

AKAPPPPPPP

16.66

-8.54

-6.57

APPPPPPPPP

19.66

-6.85

-4.88

P47068

SRTLPPHVPS

15.45

-5.88

-3.91

PLPRAPPVPP

15.47

-10.27

-8.30

DKVPPHPVPS

15.55

-7.33

-5.36

P38822

APEVPPPRRS

17.01

-8.45

-6.48

DRGPAPEVPP

17.70

-6.65

-4.68

PAPEVPPPRR

18.93

-8.00

-6.03

P04050

CLPVPPPPVR

16.66

-7.47

-5.50

PPVRPSISFN

17.67

-6.01

-4.04

LPVPPPPVRP

17.98

-8.52

-6.55

P40450

VPPPPPPPPL

16.39

-9.24

-7.27

PPPPPPPPPL

18.55

-9.41

-7.44

KLPQLPPPPP

18.66

-7.88

-5.91

P40453

IRLRKRPPPP

8.64

-7.71

-5.74

LRKRPPPPPP

9.35

-9.55

-7.58

RKRPPPPPPV

12.60

-8.22

-6.25

Q12168

NRGPPPLPPR

14.58

-10.31

-8.34

RGPPPLPPRA

17.10

-5.85

-3.88

VPNRPGGTTN

17.72

-4.69

-2.72

P41832

IPPAPPMMPA

16.66

-8.61

-6.64

PPPPPPMALF

17.88

-9.68

-7.71

PKGETPPPPP

18.08

-7.63

-5.66

P36006

IPIPPPPPPM

16.17

-9.42

-7.45

KKPKNPGGLS

16.21

-6.95

-4.98

PKDPKFEAAY

16.53

-5.28

-3.31

P38753

TPVMPPQRQS

16.59

-6.70

-4.73

NNTPVMPPQR

19.15

-6.01

-4.04

PYPSNLPIQH

19.76

-5.60

-3.63

P38237

IPSKPENTVN

18.86

-3.95

-1.98

VPPPNVPKKD

18.95

-6.88

-4.91

PFVPPPNVPK

19.75

-5.43

-3.46

P34245

TPFGPWPGPA

18.86

-6.32

-4.35

Q01389

KRSKPLPPQL

10.24

-8.86

-6.89

RRYPQTPSYY

13.14

-6.12

-4.15

KREAPKPPAN

14.25

-7.92

-5.95

Q03306

KPFRIPSSTK

14.41

-8.05

-6.08

PRTKPNVPPL

14.41

-7.69

-5.72

YRQPTPSPPL

15.12

-7.57

-5.60

P34758

HLPPPPPPRA

15.47

-8.85

-6.88

LPPPPPPRAQ

17.19

-8.99

-7.02

QHLPPPPPPR

17.35

-8.24

-6.27

P53933

TRRRPPPPPI

6.57

-10.88

-8.91

VRTRRRPPPP

7.88

-7.74

-5.77

RRPPPPPIPS

12.04

-9.04

-7.07

P32381

LLTEPPMNPL

16.00

-9.57

-7.60

ILLTEPPMNP

19.92

-6.56

-4.59

Q00453

LPHQPPPLPI

17.01

-9.94

-7.97

SLYAPPYFPH

17.70

-6.27

-4.30

IPLPHQPPPL

18.03

-7.32

-5.35

P40021

TKNTGPPPPL

14.04

-8.97

-7.00

SPPLPPPARS

17.59

-8.04

-6.07

LNSPPLPPPA

18.67

-6.84

-4.87

Q12446

RRGPAPPPPP

12.98

-8.77

-6.80

NRPVPPPPPM

13.34

-10.59

-8.62

TKHKAPPPPP

13.49

-7.99

-6.02

Q01560

YYPPPPPGEH

17.77

-7.39

-5.42

QPYYPPPPPG

18.04

-9.09

-7.12

HQPPEPQPYY

18.24

-4.26

-2.29

P00950

RRSFDVPPPP

13.92

-8.16

-6.19

RSFDVPPPPI

17.59

-7.65

-5.68

SFDVPPPPID

19.00

-5.85

-3.88

P53735

PKLVPPPPRT

14.74

-8.72

-6.75

KLVPPPPRTR

17.00

-8.51

-6.54

APKLVPPPPR

17.61

-10.00

-8.03

P33334

MPTRFPPAVF

11.33

-8.25

-6.28

KMPTRFPPAV

16.30

-8.27

-6.30

TLPPPPPPPG

16.74

-8.59

-6.62

P40523

PLAPPPHGPF

17.67

-7.42

-5.45

YMHNSPRNPD

18.38

-7.80

-5.83

VPPLAPPPHG

18.98

-7.35

-5.38

P40563

RRAPPPVPKK

11.08

-7.51

-5.54

KRRAPPPVPK

12.90

-10.97

-9.00

PKRRAPPPVP

12.99

-7.23

-5.26

Q08989

PKGPPPPPPP

17.37

-8.93

-6.96

PPPPPPPDEK

17.75

-9.26

-7.29

DHPKGPPPPP

18.37

-5.68

-3.71

P37370

PKPRPFQNKT

10.92

-6.87

-4.90

PQNRPHMPSV

14.77

-7.23

-5.26

QMPKPRPFQN

15.20

-8.58

-6.61

Q03900

TPSGAPKLKN

17.75

-6.67

-4.70

HLPNTPSGAP

20.44

-6.20

-4.23

LPNTPSGAPK

20.53

-6.17

-4.20

 


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