ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-6.PDB
Scoring matrix: MYO5_1RUW-6_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 13.53
Foldx random average score for Saccharomyces cerevisiae: 17.999

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199153
Proteins after random average filtering: 7178
 Total fragments: 2034201
Proteins after disorder filtering: 4668
 Total fragments: 132623
Proteins after pattern filtering: 2296
 Total fragments: 18268
Proteins after MINT filtering: 43
 Total fragments: 995


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

13.53

2.74

0.00

Best peptides

MFRMGMMRPR

0.00

-4.32

-7.06

         
Interactors      
P53145

PLLPPLPGQP

13.01

0.22

-2.52

PGQPPLINIG

13.62

-0.83

-3.57

LLPPLPGQPP

15.47

2.89

0.15

P39113

ASHRGPRRPQ

5.94

-1.94

-4.68

MSPLGAPPPP

7.81

-0.91

-3.65

THPEGPNCTN

11.18

0.40

-2.34

P40073

FDGYPQQQPS

13.66

0.49

-2.25

DGYPQQQPSH

16.58

2.28

-0.46

GYPQQQPSHT

16.99

2.71

-0.03

P25604

HLKPPLPPPP

9.28

0.18

-2.56

PHLKPPLPPP

11.43

0.44

-2.30

PQDQAPSLPP

12.32

1.27

-1.47

P25623

ISQPPLQPQS

11.97

0.65

-2.09

TFTPSEVPPS

12.45

0.14

-2.60

SKTKPLPVEP

13.04

0.25

-2.49

Q05933

TKFRGPAYPS

8.75

-0.88

-3.62

FRGPAYPSNS

9.71

0.72

-2.02

FTLPGTPGFP

10.76

0.08

-2.66

P53094

PLKLPPLPLT

10.76

-2.02

-4.76

AFPQSPIRAY

11.30

-0.17

-2.91

FKSSAFPQSP

11.81

0.76

-1.98

Q12451

PHLLPWLPPT

11.85

1.30

-1.44

HAPPPVPNET

12.23

1.49

-1.25

KHAPPPVPNE

12.49

0.30

-2.44

P15891

RSSAAPPPPP

10.43

-0.06

-2.80

DEPEGEPDVK

10.78

-0.90

-3.64

RRATPEKKPK

11.44

-1.29

-4.03

P48562

QFPRGPMHPN

6.19

-4.07

-6.81

TMRQAPKRPD

7.65

-1.09

-3.83

FQNIGPAPRP

7.80

-2.83

-5.57

P40341

SRNIPPPPPP

10.84

-0.73

-3.47

RNIPPPPPPP

11.49

-1.23

-3.97

PLNDPSNPVS

13.70

0.76

-1.98

Q08912

DHPKGPPPPP

9.67

-0.85

-3.59

HGDHPKGPPP

12.80

0.49

-2.25

KGPPPPPPPD

12.95

-1.55

-4.29

P17555

TAAPAPPPPP

10.96

0.29

-2.45

KSGPPPRPKK

11.18

-1.32

-4.06

GSKSGPPPRP

11.35

-0.60

-3.34

Q12342

RKAKAPPPPP

8.83

-1.67

-4.41

KAPPPPPPPP

11.99

-0.75

-3.49

KAKAPPPPPP

12.44

-0.07

-2.81

P47068

YYVPPGIPTN

9.30

-2.00

-4.74

PLPRAPPVPP

10.09

-1.00

-3.74

HSHTAPSPPP

10.28

0.94

-1.80

P38822

DRGPAPEVPP

10.75

1.35

-1.39

RGPAPEVPPP

12.99

-1.40

-4.14

NDRGPAPEVP

15.27

3.35

0.61

P04050

GYSPGSPAYS

9.48

-0.73

-3.47

VSSPGFSPTS

10.10

0.33

-2.41

AYGEAPTSPG

10.71

1.06

-1.68

P40450

IAAPAPPPLP

10.09

-0.12

-2.86

VSCIAAPAPP

11.54

1.05

-1.69

QLPPPPPPPP

12.06

-1.07

-3.81

P40453

LRKRPPPPPP

9.53

-1.50

-4.24

RKRPPPPPPV

10.61

-1.76

-4.50

SWKPPDLPIR

10.94

-0.93

-3.67

Q12168

NRGPPPLPPR

9.00

-0.93

-3.67

TTNRGPPPLP

9.87

-1.51

-4.25

PNRPGGTTNR

10.47

-0.13

-2.87

P41832

GDSPAPPPPP

11.65

0.18

-2.56

LSSQPPPPPP

12.56

-0.35

-3.09

DGVIPPAPPM

13.12

-1.14

-3.88

P36006

PKNPGGLSGK

8.71

-1.90

-4.64

TANIPIPPPP

12.14

-0.39

-3.13

PMGQPKDPKF

13.30

-1.01

-3.75

P38753

YSPYPSNLPI

12.73

0.12

-2.62

PSNLPIQHPT

13.08

1.01

-1.73

ANNTPVMPPQ

13.74

0.23

-2.51

P38237

NFQIPSKPEN

9.57

-1.11

-3.85

PFVPPPNVPK

11.63

-0.97

-3.71

DLNDPFVPPP

12.48

0.23

-2.51

P34245

STPFGPWPGP

10.43

-1.66

-4.40

AYSTPFGPWP

14.65

0.96

-1.78

FGPWPGPAEC

14.90

0.10

-2.64

Q01389

PKREAPKPPA

9.34

-1.32

-4.06

IGEEAPTKPN

10.58

-0.35

-3.09

KRSKPLPPQL

10.71

-0.77

-3.51

Q03306

PRTKPNVPPL

11.27

-0.26

-3.00

GEEKPFRIPS

11.64

-0.50

-3.24

NKSIPRTKPN

12.05

-0.44

-3.18

P34758

HLPPPPPPRA

9.99

-1.41

-4.15

IHSQPNKPNY

12.57

-0.35

-3.09

QHLPPPPPPR

12.57

0.33

-2.41

P53933

RRRPPPPPIP

9.92

-1.74

-4.48

VSYPGNPTSR

10.33

0.46

-2.28

TRRRPPPPPI

10.48

-0.45

-3.19

P32381

LLTEPPMNPL

8.94

-2.46

-5.20

ILLTEPPMNP

14.45

1.48

-1.26

Q00453

LYAPPYFPHP

10.51

-0.80

-3.54

ISTPASPQDT

10.74

1.90

-0.84

ISLYAPPYFP

10.77

0.89

-1.85

P40021

TKNTGPPPPL

10.28

-1.32

-4.06

VLNSPPLPPP

11.47

-0.51

-3.25

PLPPPLFPSS

11.94

-0.07

-2.81

Q12446

RRGPAPPPPP

8.13

-1.39

-4.13

TGRRGPAPPP

8.76

-2.28

-5.02

VRLPAPPPPP

9.20

-0.06

-2.80

Q01560

YYPPPPPGEH

10.75

-2.50

-5.24

HHQPPEPQPY

11.64

0.72

-2.02

QEPPAPQEQN

11.66

0.96

-1.78

P00950

SFDVPPPPID

12.31

-0.87

-3.61

FDVPPPPIDA

13.24

-0.73

-3.47

RRSFDVPPPP

13.32

2.22

-0.52

P53735

KLVPPPPRTR

8.52

-2.25

-4.99

PKLVPPPPRT

13.15

-1.48

-4.22

LVPPPPRTRS

13.81

-2.33

-5.07

P33334

NAIPGGPKFE

9.73

0.02

-2.72

LFFDPSLNPI

10.75

-0.38

-3.12

FLPPPPPPPS

10.83

-1.72

-4.46

P40523

GAPPGTVPNM

10.28

-1.32

-4.06

ATAGGPLASP

11.61

-0.15

-2.89

MLGAPPGTVP

11.97

-0.55

-3.29

P40563

MVNPGQLPPS

8.29

-3.06

-5.80

RRAPPPVPKK

9.88

-1.67

-4.41

PKRRAPPPVP

10.29

-0.37

-3.11

Q08989

DHPKGPPPPP

9.67

-0.85

-3.59

KGPPPPPPPP

12.65

-1.68

-4.42

PKGPPPPPPP

13.06

-0.66

-3.40

P37370

PALPGHVPPP

9.13

-1.22

-3.96

PLSPAPAVPS

10.37

0.48

-2.26

NLEKPPSPPV

10.48

-0.03

-2.77

P39743

AYSNPLTSPV

13.80

0.84

-1.90

YSNPLTSPVA

16.47

3.58

0.84

PAYSNPLTSP

16.79

3.83

1.09

Q03900

NTPSGAPKLK

12.38

0.15

-2.59

PSGAPKLKNY

14.36

0.82

-1.92

GSHLPNTPSG

14.44

0.89

-1.85

 


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