ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-5.PDB
Scoring matrix: MYO5_1RUW-5_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.94
Foldx random average score for Saccharomyces cerevisiae: 22.186

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199153
Proteins after random average filtering: 7178
 Total fragments: 1261014
Proteins after disorder filtering: 4375
 Total fragments: 68241
Proteins after pattern filtering: 2101
 Total fragments: 11990
Proteins after MINT filtering: 42
 Total fragments: 718


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

23.94

-1.33

0.00

Best peptides

RRNRHFWDHG

0.00

-2.51

-1.18

         
Interactors      
P53145

NEPLLPPLPG

18.68

-4.40

-3.07

PLPGQPPLIN

20.77

-7.30

-5.97

PLLPPLPGQP

22.12

-6.64

-5.31

P39113

HRGPRRPQKN

14.06

-6.57

-5.24

GPRRPQKNRY

16.18

-5.05

-3.72

PRRPQKNRYN

17.68

-2.97

-1.64

P40073

GYPQQQPSHT

20.45

-1.92

-0.59

FDGYPQQQPS

20.58

-0.90

0.43

QFDGYPQQQP

21.51

-2.87

-1.54

P25604

PKPKSPHLKP

17.23

-4.74

-3.41

PHLKPPLPPP

18.54

-5.18

-3.85

QQEQNTPPLP

19.80

-1.99

-0.66

P25623

SKTKPLPVEP

17.28

-3.57

-2.24

SISQPPLQPQ

19.89

-3.66

-2.33

PHATPKNVDA

20.91

-2.11

-0.78

Q05933

FRGPAYPSNS

14.35

-4.75

-3.42

TKFRGPAYPS

15.40

-2.41

-1.08

KFRGPAYPSN

17.88

-3.63

-2.30

P53094

FKSSAFPQSP

15.55

-5.40

-4.07

TREPNEPPPP

17.76

-1.86

-0.53

REPNEPPPPC

17.88

-4.42

-3.09

Q12451

PKHAPPPVPN

17.27

-6.60

-5.27

QPHLLPWLPP

19.04

-7.40

-6.07

APKHAPPPVP

20.01

-5.98

-4.65

P15891

RRATPEKKPK

12.83

-1.03

0.30

SRSSAAPPPP

16.15

-5.39

-4.06

PVKTPSPAPA

18.62

-3.83

-2.50

P48562

QRTAPKPPIS

13.69

-4.12

-2.79

QFPRGPMHPN

14.17

-3.98

-2.65

MRQAPKRPDA

14.41

-5.78

-4.45

P40341

SRNIPPPPPP

15.85

-5.50

-4.17

PPPPPKPPLN

19.17

-7.49

-6.16

PKPPLNDPSN

19.89

-3.68

-2.35

Q08912

PKGPPPPPPP

18.29

-6.37

-5.04

TPSWGPSPMG

18.44

-4.87

-3.54

DHPKGPPPPP

18.53

-6.60

-5.27

P17555

PRPKKPSTLK

16.20

-2.86

-1.53

PPPRPKKPST

16.63

-2.98

-1.65

SKSGPPPRPK

17.12

-4.49

-3.16

Q12342

RKAKAPPPPP

12.65

-5.36

-4.03

AKAPPPPPPP

18.31

-5.79

-4.46

APPPPPPPPP

21.52

-7.74

-6.41

P47068

PLPRAPPVPP

16.28

-8.29

-6.96

DKVPPHPVPS

16.91

-3.60

-2.27

SRTLPPHVPS

17.16

-3.41

-2.08

P38822

DRGPAPEVPP

20.00

-2.82

-1.49

APEVPPPRRS

20.72

-5.06

-3.73

P04050

SPTSPGYSPG

17.37

-5.81

-4.48

SPGSPAYSPK

18.45

-4.22

-2.89

PPVRPSISFN

18.85

-4.34

-3.01

P40450

PKLFPRLSSD

14.57

-4.65

-3.32

SSPKLFPRLS

17.78

-2.20

-0.87

QLPPPPPPPP

19.86

-7.61

-6.28

P40453

IRLRKRPPPP

11.37

-5.72

-4.39

LRKRPPPPPP

13.45

-7.27

-5.94

RLRKRPPPPP

13.84

-8.32

-6.99

Q12168

NRGPPPLPPR

16.78

-3.52

-2.19

DNDDPYFPQF

17.67

-4.84

-3.51

PPPVPNRPGG

18.13

-6.97

-5.64

P41832

PKGETPPPPP

18.40

-6.00

-4.67

GVIPPAPPMM

18.47

-5.31

-3.98

PPPPPPPPPM

18.60

-7.41

-6.08

P36006

PMGQPKDPKF

15.82

-5.04

-3.71

PKDPKFEAAY

16.64

-2.95

-1.62

QPKDPKFEAA

16.91

-3.82

-2.49

P38753

PIQHPTNSAN

17.90

-4.14

-2.81

PVPGPALYAG

18.89

-5.59

-4.26

SPPVPGPALY

19.59

-4.76

-3.43

P38237

NFQIPSKPEN

19.37

-5.00

-3.67

FQIPSKPENT

19.93

-2.20

-0.87

DLNDPFVPPP

20.17

-6.75

-5.42

P34245

FGPWPGPAEC

18.90

-1.82

-0.49

AYSTPFGPWP

18.95

-4.21

-2.88

TPFGPWPGPA

19.30

-3.75

-2.42

Q01389

RRYPQTPSYY

12.68

-3.08

-1.75

KREAPKPPAN

14.57

-4.28

-2.95

APKREAPKPP

16.29

-8.34

-7.01

Q03306

SIPRTKPNVP

15.36

-5.69

-4.36

GEEKPFRIPS

16.31

-3.90

-2.57

RLPNSAPSTN

17.44

-5.98

-4.65

P34758

QPQHLPPPPP

18.13

-6.81

-5.48

HLPPPPPPRA

19.06

-6.26

-4.93

QHLPPPPPPR

19.35

-3.51

-2.18

P53933

VRTRRRPPPP

11.96

-7.31

-5.98

RRPPPPPIPS

13.87

-4.69

-3.36

RRRPPPPPIP

14.87

-5.34

-4.01

Q00453

PPYFPHPMPS

16.54

-7.17

-5.84

PYFPHPMPSA

17.67

-3.95

-2.62

LYAPPYFPHP

17.76

-3.90

-2.57

P40021

DFLPSTPSQM

17.10

-3.15

-1.82

SLDFLPSTPS

18.95

-3.70

-2.37

PPPPLPPPLF

19.40

-7.31

-5.98

P36150

PIVVNPSSPS

21.32

-3.95

-2.62

Q12446

NRPVPPPPPM

13.17

-6.15

-4.82

RRGPAPPPPP

14.67

-6.43

-5.10

PRRGPAPPPP

15.61

-6.75

-5.42

Q01560

QPYYPPPPPG

14.78

-9.28

-7.95

HHQPPEPQPY

18.10

-3.12

-1.79

PQPYYPPPPP

18.58

-7.05

-5.72

P00950

RRSFDVPPPP

16.25

-4.65

-3.32

SFDVPPPPID

19.16

-5.04

-3.71

P53735

PKLVPPPPRT

18.73

-3.43

-2.10

APKLVPPPPR

19.98

-4.33

-3.00

KLVPPPPRTR

20.86

-3.65

-2.32

P33334

SKMPTRFPPA

13.99

-5.29

-3.96

MPTRFPPAVF

14.53

-4.14

-2.81

TLPPPPPPPG

17.44

-7.65

-6.32

P40523

PPPHGPFSTS

18.76

-4.16

-2.83

PLAPPPHGPF

19.13

-5.21

-3.88

PPHGPFSTSM

19.21

-4.84

-3.51

P40563

PKRRAPPPVP

14.48

-5.36

-4.03

KRRAPPPVPK

15.90

-5.10

-3.77

RRAPPPVPKK

16.49

-2.25

-0.92

Q08989

PKGPPPPPPP

18.29

-6.37

-5.04

DHPKGPPPPP

18.53

-6.60

-5.27

PPPPDEKGRG

20.00

-4.61

-3.28

P37370

PKPRPFQNKT

12.90

-3.40

-2.07

QMPKPRPFQN

13.81

-5.91

-4.58

PKVPQNRPHM

15.73

-2.39

-1.06

Q03900

SHLPNTPSGA

20.10

-0.97

0.36

PSGAPKLKNY

21.64

-2.41

-1.08

 


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