ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-23.PDB
Scoring matrix: MYO5_1RUW-23_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.58
Foldx random average score for Saccharomyces cerevisiae: 10.030

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3220687
Proteins after random average filtering: 7178
 Total fragments: 1451771
Proteins after disorder filtering: 4559
 Total fragments: 61589
Proteins after pattern filtering: 1967
 Total fragments: 8763
Proteins after MINT filtering: 43
 Total fragments: 640


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.58

-0.91

0.00

Best peptides

RPLFPWH

0.00

-5.33

-4.42

         
Interactors      
P53145

EPLLPPL

5.69

-3.78

-2.87

PLLPPLP

7.43

-3.64

-2.73

PGQPPLI

7.90

-2.06

-1.15

P39113

APPPPPH

7.85

-0.93

-0.02

RGPRRPQ

7.91

-3.36

-2.45

PPPPPHK

8.31

-2.51

-1.60

P40073

PQQQPSH

8.21

-2.04

-1.13

YPQQQPS

9.11

-2.55

-1.64

P25604

PHLKPPL

6.48

-3.73

-2.82

PPLPPKP

6.51

-4.18

-3.27

PSLPPKP

6.98

-3.44

-2.53

P25623

KPLPVEP

6.33

-3.82

-2.91

TPPLPPH

6.56

-3.58

-2.67

PPLPPHA

7.33

-3.46

-2.55

Q05933

TPGFPLN

8.09

-1.97

-1.06

GPAYPSN

9.83

-1.73

-0.82

FTLPGTP

9.88

-2.81

-1.90

P53094

YPLKLPP

6.55

-4.17

-3.26

LKLPPLP

6.93

-3.73

-2.82

VPLPPQT

7.72

-3.76

-2.85

Q12451

PHLLPWL

4.06

-5.25

-4.34

QPHLLPW

8.17

-2.80

-1.89

PWLPPTD

8.24

-2.60

-1.69

P15891

PPLPSRN

7.07

-3.38

-2.47

QPPLPSR

7.55

-4.09

-3.18

PPPPPRR

7.83

-2.64

-1.73

P48562

SPLNPYR

6.77

-4.07

-3.16

LNPYRPH

7.16

-1.22

-0.31

GPMHPNN

8.12

-3.30

-2.39

P40341

RNIPPPP

7.10

-3.28

-2.37

KPPLNDP

7.90

-3.39

-2.48

PPPPPPK

7.93

-2.99

-2.08

Q08912

PPPPDEK

8.29

-3.52

-2.61

PPPPPDE

8.32

-2.69

-1.78

KGPPPPP

9.16

-1.82

-0.91

P17555

PPPRPKK

7.28

-2.89

-1.98

RPKKPST

7.95

-3.49

-2.58

PPRPKKP

9.06

-2.48

-1.57

Q12342

KAPPPPP

9.02

-1.10

-0.19

PPPPPPP

9.66

-1.04

-0.13

PSTPSDG

9.87

-2.19

-1.28

P47068

PPLPRAP

7.91

-3.85

-2.94

APSPPPH

8.16

-0.97

-0.06

VMPFVDP

8.35

-2.68

-1.77

P38822

PEVPPPR

8.47

-3.03

-2.12

P04050

SPAYSPK

8.59

-2.23

-1.32

TCLPVPP

8.69

-2.56

-1.65

VPPPPVR

9.06

-2.22

-1.31

P40450

PKLFPRL

4.40

-3.51

-2.60

PPLPESL

6.58

-3.46

-2.55

PPLPDLF

6.70

-3.46

-2.55

P40453

PPLPPKI

5.45

-3.48

-2.57

PDLPIRL

6.46

-3.00

-2.09

PEIPPPL

6.79

-3.38

-2.47

Q12168

PPLPPRA

6.70

-3.21

-2.30

PPPLPPR

7.53

-3.51

-2.60

PPPVPNR

8.14

-2.40

-1.49

P41832

PPLPSVL

7.25

-2.70

-1.79

PPAPPMM

7.62

-1.93

-1.02

PPMMPAS

7.93

-5.09

-4.18

P36006

IPIPPPP

7.45

-2.14

-1.23

MGQPKDP

8.29

-2.48

-1.57

PPPPPPM

8.30

-0.86

0.05

P38753

TPVMPPQ

7.39

-3.83

-2.92

PVMPPQR

8.12

-4.17

-3.26

PSNLPIQ

8.58

-3.10

-2.19

P38237

PPNVPKK

7.70

-2.68

-1.77

FQIPSKP

8.84

-3.73

-2.82

NDPFVPP

9.05

-1.58

-0.67

P34245

STPFGPW

8.83

-1.38

-0.47

Q01389

KPLPPQL

5.48

-4.66

-3.75

RPVPPDS

7.56

-3.13

-2.22

YPQTPSY

7.68

-3.35

-2.44

Q03306

PPLPQME

6.21

-3.50

-2.59

KPNVPPL

7.87

-2.06

-1.15

PNVPPLQ

8.79

-2.66

-1.75

P34758

LPLEPLK

6.45

-3.64

-2.73

QHLPPPP

7.33

-3.35

-2.44

QPNKPNY

7.46

-3.13

-2.22

P53933

PPLPNRQ

6.24

-3.71

-2.80

RPPPPPI

7.30

-2.80

-1.89

PPPLPNR

7.46

-3.79

-2.88

P32381

EPPMNPL

8.58

-2.78

-1.87

Q00453

APIPLPH

6.39

-2.51

-1.60

PPPLPIY

7.02

-3.98

-3.07

YFPHPMP

7.05

-3.30

-2.39

P40021

PPLFPSS

5.77

-3.71

-2.80

PPLPPPL

6.02

-3.75

-2.84

PPLPPPA

6.95

-3.39

-2.48

Q12446

RPLPQLP

6.18

-4.42

-3.51

LPQLPNR

6.27

-4.57

-3.66

PPPPPMR

6.97

-3.03

-2.12

Q01560

PPPPGEH

7.63

-3.02

-2.11

PPEPQPY

8.04

-2.00

-1.09

PEPQPYY

8.26

-3.05

-2.14

P00950

PPPPIDA

8.99

-2.38

-1.47

VPPPPID

9.68

-1.58

-0.67

P53735

PKLVPPP

7.53

-2.91

-2.00

LVPPPPR

8.49

-3.04

-2.13

PPPPRTR

9.22

-2.58

-1.67

P33334

LALPPPP

7.41

-2.71

-1.80

GPKFEPL

7.46

-2.34

-1.43

TFLPPPP

7.46

-2.41

-1.50

P40523

TPLPTPV

7.38

-2.75

-1.84

PLAPPPH

8.19

-1.88

-0.97

TPQPPSA

8.60

-1.04

-0.13

P40563

TPKVPER

7.31

-3.26

-2.35

PPPVPKK

7.40

-2.73

-1.82

PSERPKR

7.92

-2.31

-1.40

Q08989

PPPPDEK

8.29

-3.52

-2.61

PPPPPDE

8.32

-2.69

-1.78

KGPPPPP

9.16

-1.82

-0.91

P37370

PPIPTSH

6.17

-1.90

-0.99

PPLPAAM

6.65

-3.51

-2.60

PPLPTFS

7.07

-3.52

-2.61

P39743

NPLTSPV

9.76

-1.89

-0.98

Q03900

SHLPNTP

9.74

-2.32

-1.41

 


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