ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1RUW-19.PDB
Scoring matrix: MYO5_1RUW-19_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.09
Foldx random average score for Saccharomyces cerevisiae: 18.190

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206331
Proteins after random average filtering: 7178
 Total fragments: 1611453
Proteins after disorder filtering: 4575
 Total fragments: 73833
Proteins after pattern filtering: 2040
 Total fragments: 7454
Proteins after MINT filtering: 38
 Total fragments: 277


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.09

2.50

0.00

Best peptides

RLKMWGRHY

0.00

-0.64

-3.14

         
Interactors      
P53145

PGQPPLINI

15.29

-3.60

-6.10

PLLPPLPGQ

16.12

-3.04

-5.54

PNEPLLPPL

17.28

-3.82

-6.32

P39113

AMSPLGAPP

13.20

-4.00

-6.50

PRRPQKNRY

14.01

-3.88

-6.38

FTHPEGPNC

15.67

-0.59

-3.09

P40073

FDGYPQQQP

17.43

-3.59

-6.09

DGYPQQQPS

17.91

-0.02

-2.52

P25604

DQAPSLPPK

15.89

-0.58

-3.08

DGSSPHSIP

16.16

-2.36

-4.86

HLKPPLPPP

16.67

-4.90

-7.40

P25623

PASPSISLP

16.32

-3.02

-5.52

PVEPASPSI

17.28

-1.88

-4.38

PLQPQSKTK

17.34

-1.71

-4.21

Q05933

NFTLPGTPG

16.09

-1.24

-3.74

PGTPGFPLN

16.15

-1.59

-4.09

PVDPNTDRM

16.47

-2.44

-4.94

P53094

DEDPVSPKP

10.91

-2.61

-5.11

LKLPPLPLT

14.19

-3.17

-5.67

PLPPQTREP

15.21

-2.82

-5.32

Q12451

AAPKHAPPP

16.90

-2.70

-5.20

HLLPWLPPT

17.46

-1.73

-4.23

P15891

RRATPEKKP

10.67

-6.05

-8.55

ISPKPFSKP

12.76

-4.65

-7.15

PSPAPAAKI

13.55

-4.20

-6.70

P48562

GQFPRGPMH

11.31

-1.96

-4.46

PLNPYRPHH

11.65

-1.02

-3.52

PYRPHHNMI

13.91

-3.57

-6.07

Q08912

GDHPKGPPP

15.32

-3.93

-6.43

YTPSWGPSP

16.06

-1.67

-4.17

PSWGPSPMG

16.74

-1.64

-4.14

P17555

SGPPPRPKK

14.09

-2.71

-5.21

PKKPSTLKT

14.20

-1.84

-4.34

ATAAPAPPP

16.97

-3.25

-5.75

P47068

NTAPPLPRA

13.69

-1.38

-3.88

PLPPVSEEY

14.51

-1.90

-4.40

DKVPPHPVP

14.60

-3.92

-6.42

P38822

RGPAPEVPP

15.67

-5.45

-7.95

P04050

AYSPTSPSY

13.00

-2.12

-4.62

NYSPTSPSY

13.11

-1.37

-3.87

GSPAYSPKQ

14.98

-1.09

-3.59

P40450

SSPKLFPRL

16.22

-1.81

-4.31

LVTPPAPPL

16.66

-4.03

-6.53

VSSSPKLFP

16.88

-2.76

-5.26

P40453

PDLPIRLRK

13.14

-2.23

-4.73

AWDCPRCGP

15.40

-3.29

-5.79

DCPRCGPTA

15.74

-0.11

-2.61

Q12168

NDDPYFPQF

11.99

-3.61

-6.11

RGPPPLPPR

14.68

-6.05

-8.55

KVQHPVPKP

14.81

-4.62

-7.12

P41832

GVIPPAPPM

17.60

-4.33

-6.83

P36006

MGQPKDPKF

9.96

-4.34

-6.84

PKNPGGLSG

16.17

-0.49

-2.99

NKKPKNPGG

16.28

-1.73

-4.23

P38753

PVMPPQRQS

15.90

-2.05

-4.55

PSNLPIQHP

16.14

-4.66

-7.16

NNTPVMPPQ

16.36

-1.99

-4.49

P38237

DLNDPFVPP

16.00

-2.30

-4.80

NFQIPSKPE

16.56

0.75

-1.75

FQIPSKPEN

17.94

0.07

-2.43

P34245

YSTPFGPWP

14.85

-2.77

-5.27

AYSTPFGPW

15.19

-1.51

-4.01

FGPWPGPAE

17.24

-1.13

-3.63

Q01389

RRYPQTPSY

13.48

-3.82

-6.32

IASPTSPKS

14.14

-1.09

-3.59

ASPPASPSY

14.58

-2.71

-5.21

Q03306

NKSIPRTKP

11.33

-3.45

-5.95

GEEKPFRIP

14.82

-3.96

-6.46

RQPTPSPPL

15.11

-4.03

-6.53

P34758

NQQQPQHLP

12.60

-3.81

-6.31

NTTVPQQLP

13.93

-3.91

-6.41

QQLPLEPLK

14.23

-3.78

-6.28

P53933

NDLPMELPH

14.67

-1.96

-4.46

YNDLPMELP

16.70

-5.35

-7.85

VAPPPLPNR

16.81

-3.51

-6.01

Q00453

YAPPYFPHP

12.11

-3.93

-6.43

SAPIPLPHQ

14.96

-0.44

-2.94

HQPPPLPIY

16.02

-4.34

-6.84

P40021

PLPPPARSQ

14.34

-3.50

-6.00

DFLPSTPSQ

15.76

-1.44

-3.94

PSTPSQMNY

16.36

-2.99

-5.49

Q12446

NGGTPGGPP

13.90

-3.01

-5.51

PASPEVRKE

14.75

-0.41

-2.91

ALPPASPEV

14.83

-1.30

-3.80

Q01560

HHQPPEPQP

16.59

-3.46

-5.96

PQEPPAPQE

16.60

-2.08

-4.58

PDAPQEPQV

16.82

-2.34

-4.84

P33334

NAIPGGPKF

7.68

-3.63

-6.13

PSLNPIPHF

12.85

-2.47

-4.97

GGPKFEPLY

13.16

-3.59

-6.09

P40523

LGAPPGTVP

14.17

-4.06

-6.56

PGTVPNMQM

15.69

-3.70

-6.20

PHGPFSTSM

16.07

-2.25

-4.75

P40563

RAPPPVPKK

12.44

-4.26

-6.76

GMVNPGQLP

12.86

-4.63

-7.13

PSERPKRRA

13.14

-1.94

-4.44

Q08989

GDHPKGPPP

15.32

-3.93

-6.43

NGDHPKGPP

16.17

-3.22

-5.72

P37370

AVTPGGPLP

11.21

-3.37

-5.87

VSQMPKPRP

13.78

-5.25

-7.75

KVPQNRPHM

13.94

-0.62

-3.12

P39743

AYSNPLTSP

14.71

-2.72

-5.22

NATIPEDNP

15.89

-2.15

-4.65

Q03900

NTPSGAPKL

14.10

-0.09

-2.59

PNTPSGAPK

15.33

-1.72

-4.22

PSGAPKLKN

15.82

-1.43

-3.93

 


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