ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1R6S-19.PDB
Scoring matrix: MYO5_1R6S-19_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 15.59
Foldx random average score for Saccharomyces cerevisiae: 16.078

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206331
Proteins after random average filtering: 7178
 Total fragments: 1613356
Proteins after disorder filtering: 4599
 Total fragments: 77917
Proteins after pattern filtering: 2078
 Total fragments: 7826
Proteins after MINT filtering: 40
 Total fragments: 302


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

15.59

4.87

0.00

Best peptides

RRKMWGRRY

0.00

-5.89

-10.76

         
Interactors      
P53145

PGQPPLINI

12.33

-2.70

-7.57

PLLPPLPGQ

13.29

-2.61

-7.48

PNEPLLPPL

14.81

-3.57

-8.44

P39113

AMSPLGAPP

11.15

-3.63

-8.50

PRRPQKNRY

11.82

-4.62

-9.49

FTHPEGPNC

12.78

-1.45

-6.32

P40073

GYPQQQPSH

15.18

-0.14

-5.01

P25604

QDQAPSLPP

13.31

-2.26

-7.13

QNTPPLPPK

13.53

-2.23

-7.10

DQAPSLPPK

14.08

-0.70

-5.57

P25623

SDTPPLPPH

13.38

-1.26

-6.13

PVEPASPSI

14.07

-0.52

-5.39

PLQPQSKTK

14.23

-0.36

-5.23

Q05933

PGTPGFPLN

13.30

-0.58

-5.45

FRGPAYPSN

13.31

-1.50

-6.37

FTLPGTPGF

14.51

-2.24

-7.11

P53094

LKLPPLPLT

12.24

-2.15

-7.02

DEDPVSPKP

12.52

-1.60

-6.47

AKAPNTPST

13.34

-0.77

-5.64

Q12451

AAPKHAPPP

14.39

-3.62

-8.49

HLLPWLPPT

14.51

-2.94

-7.81

P15891

RRATPEKKP

9.87

-6.09

-10.96

AAQPPLPSR

12.10

-2.47

-7.34

RATPEKKPK

13.11

-3.75

-8.62

P48562

PLNPYRPHH

11.07

-1.60

-6.47

GQFPRGPMH

11.09

-0.31

-5.18

QRTAPKPPI

12.64

-4.39

-9.26

Q08912

GDHPKGPPP

11.94

-3.92

-8.79

YTPSWGPSP

13.58

-2.14

-7.01

VCYTPSWGP

14.58

-2.25

-7.12

P17555

PKKPSTLKT

13.52

-0.37

-5.24

SGPPPRPKK

14.07

-2.10

-6.97

ATAAPAPPP

15.20

-3.75

-8.62

Q12342

LETPSTPSD

15.35

-0.37

-5.24

P47068

YYVPPGIPT

12.60

-1.61

-6.48

DKVPPHPVP

12.73

-3.36

-8.23

ALSAPSVPP

13.06

-2.95

-7.82

P38822

RGPAPEVPP

13.91

-4.63

-9.50

P04050

AYSPTSPSY

11.15

-2.61

-7.48

GYSPGSPAY

13.72

-1.12

-5.99

SYSPTSPNY

13.92

-2.59

-7.46

P40450

LVTPPAPPL

13.53

-3.38

-8.25

SSPKLFPRL

14.04

-2.55

-7.42

PAPPPLPDL

15.29

-3.27

-8.14

P40453

PDLPIRLRK

10.90

-1.97

-6.84

DCPRCGPTA

12.90

-0.16

-5.03

SWKPPDLPI

13.45

-1.59

-6.46

Q12168

NDDPYFPQF

11.48

-3.81

-8.68

RGPPPLPPR

12.97

-5.09

-9.96

PNRPGGTTN

14.24

-0.04

-4.91

P41832

GVIPPAPPM

14.82

-2.62

-7.49

P36006

MGQPKDPKF

10.66

-3.33

-8.20

PKNPGGLSG

12.46

-0.99

-5.86

PKDPKFEAA

15.08

-0.42

-5.29

P38753

PVMPPQRQS

13.90

-1.73

-6.60

P38237

DLNDPFVPP

14.44

-1.91

-6.78

FVPPPNVPK

15.41

-0.76

-5.63

P34245

YSTPFGPWP

12.41

-3.07

-7.94

AYSTPFGPW

12.45

-0.20

-5.07

PWPGPAECL

14.30

-0.72

-5.59

Q01389

RRYPQTPSY

9.88

-6.44

-11.31

ASPPASPSY

12.20

-2.52

-7.39

KRSKPLPPQ

12.47

-4.13

-9.00

Q03306

GEEKPFRIP

12.36

-3.93

-8.80

RQPTPSPPL

12.68

-4.57

-9.44

PWGPNNRIN

12.90

-0.02

-4.89

P34758

QQLPLEPLK

12.32

-1.20

-6.07

QSIKPSSTP

14.08

-3.47

-8.34

HSQPNKPNY

14.65

-3.92

-8.79

P53933

NDLPMELPH

13.44

-1.61

-6.48

VAPPPLPNR

13.69

-2.78

-7.65

P32381

LTEPPMNPL

15.57

-2.07

-6.94

Q00453

YAPPYFPHP

12.87

-4.56

-9.43

SDTPASPSK

13.33

-0.74

-5.61

PHPMPSAPI

13.34

-3.08

-7.95

P40021

PLPPPARSQ

11.58

-2.34

-7.21

DFLPSTPSQ

13.33

-0.21

-5.08

PSTPSQMNY

13.90

-4.18

-9.05

Q12446

ATGQPAVPL

13.00

-2.42

-7.29

GGTPGGPPA

13.55

-0.80

-5.67

ALPPASPEV

13.81

-1.88

-6.75

Q01560

PDAPQEPQV

13.17

-1.87

-6.74

PQEPPAPQE

14.53

0.20

-4.67

HHQPPEPQP

14.63

-3.52

-8.39

P33334

NAIPGGPKF

10.66

-3.27

-8.14

GGPKFEPLY

11.34

-3.34

-8.21

LFFDPSLNP

13.67

-1.70

-6.57

P40523

LGAPPGTVP

12.79

-3.71

-8.58

VGVPPLAPP

13.71

-3.35

-8.22

LAPPPHGPF

13.94

-3.44

-8.31

P40563

PSERPKRRA

11.28

-0.85

-5.72

GMVNPGQLP

11.80

-4.00

-8.87

RAPPPVPKK

12.93

-5.32

-10.19

Q08989

GDHPKGPPP

11.94

-3.92

-8.79

P37370

AVTPGGPLP

10.00

-2.72

-7.59

VSQMPKPRP

11.68

-6.11

-10.98

AAAPPLPTF

11.95

-4.05

-8.92

P39743

AYSNPLTSP

13.94

-2.52

-7.39

Q03900

PNTPSGAPK

12.97

-0.09

-4.96

PSGAPKLKN

15.17

-0.48

-5.35

 


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