ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1R6S-12.PDB
Scoring matrix: MYO5_1R6S-12_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.32
Foldx random average score for Saccharomyces cerevisiae: 12.112

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213509
Proteins after random average filtering: 7178
 Total fragments: 1377386
Proteins after disorder filtering: 4553
 Total fragments: 66103
Proteins after pattern filtering: 2118
 Total fragments: 11080
Proteins after MINT filtering: 44
 Total fragments: 823


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.32

-1.21

0.00

Best peptides

YRRPPFWR

0.00

-3.39

-2.18

         
Interactors      
P53145

PGQPPLIN

9.48

-2.88

-1.67

PLLPPLPG

9.49

-3.24

-2.03

PNEPLLPP

10.39

-2.55

-1.34

P39113

PRRPQKNR

5.90

-3.12

-1.91

SHRGPRRP

6.95

-2.86

-1.65

HRGPRRPQ

7.98

-1.52

-0.31

P40073

DGYPQQQP

11.31

-2.52

-1.31

P25604

HLKPPLPP

7.01

-4.04

-2.83

PSLPPKPN

9.22

-3.34

-2.13

PKSPHLKP

9.50

-2.44

-1.23

P25623

ISQPPLQP

9.53

-2.70

-1.49

SDTPPLPP

10.07

-3.09

-1.88

DTPPLPPH

10.68

-2.58

-1.37

Q05933

PGTPGFPL

8.93

-3.10

-1.89

FRGPAYPS

9.38

-2.25

-1.04

KFRGPAYP

10.68

-1.48

-0.27

P53094

LKLPPLPL

8.37

-4.27

-3.06

DPVSPKPV

9.52

-1.88

-0.67

CYPLKLPP

9.63

-3.45

-2.24

Q12451

HLLPWLPP

9.88

-3.31

-2.10

QPHLLPWL

10.61

-2.91

-1.70

PHLLPWLP

10.62

-3.16

-1.95

P15891

PPPPPRRA

7.18

-4.46

-3.25

PPPPRRAT

8.87

-3.98

-2.77

KKEPVKTP

9.18

-0.87

0.34

P48562

VAKPKKPA

7.99

-2.15

-0.94

RQAPKRPD

8.24

-2.57

-1.36

IGPAPRPP

8.36

-3.11

-1.90

P40341

PPKPPLND

8.55

-4.26

-3.05

RNIPPPPP

8.59

-2.63

-1.42

PPPPPKPP

8.93

-2.45

-1.24

Q08912

KGPPPPPP

9.84

-2.92

-1.71

CYTPSWGP

10.20

-2.96

-1.75

GPPPPPPP

11.21

-2.74

-1.53

P17555

SGPPPRPK

6.87

-3.77

-2.56

PPRPKKPS

8.18

-2.29

-1.08

PKKPSTLK

9.74

-2.33

-1.12

Q12342

KAPPPPPP

9.81

-3.00

-1.79

KAKAPPPP

10.46

-2.59

-1.38

AKAPPPPP

10.78

-2.17

-0.96

P47068

PSSNPFFR

7.99

-2.92

-1.71

PHVPSLTN

8.38

-4.15

-2.94

NTAPPLPR

8.67

-3.27

-2.06

P38822

PEVPPPRR

9.14

-3.77

-2.56

P04050

PPPPVRPS

8.54

-3.33

-2.12

PVRPSISF

9.06

-2.55

-1.34

VSSPGFSP

9.29

-2.65

-1.44

P40450

SSPKLFPR

8.00

-3.77

-2.56

PAPPPLPD

8.17

-4.09

-2.88

PKLFPRLS

8.49

-2.94

-1.73

P40453

WKPPDLPI

7.02

-4.24

-3.03

RKRPPPPP

7.41

-3.07

-1.86

EIPPPLPP

7.75

-4.26

-3.05

Q12168

PYFPQFRS

6.28

-4.47

-3.26

RGPPPLPP

7.45

-4.05

-2.84

PPVPNRPG

8.23

-3.97

-2.76

P41832

PAPPMMPA

8.91

-4.41

-3.20

PPPPPLPS

8.91

-4.08

-2.87

GVIPPAPP

9.64

-2.97

-1.76

P36006

QPKDPKFE

8.77

-2.76

-1.55

PKDPKFEA

9.26

-2.71

-1.50

PPPPPMGQ

9.28

-4.67

-3.46

P38753

PVMPPQRQ

8.75

-4.13

-2.92

PYPSNLPI

9.42

-3.34

-2.13

AHISPPVP

10.82

-2.97

-1.76

P38237

FQIPSKPE

6.75

-1.94

-0.73

PFVPPPNV

10.47

-3.87

-2.66

DLNDPFVP

10.96

-3.29

-2.08

P34245

STPFGPWP

9.31

-3.25

-2.04

TPFGPWPG

10.72

-2.74

-1.53

AYSTPFGP

10.85

-1.94

-0.73

Q01389

PLPPQLLS

8.62

-3.86

-2.65

PSYPSIFR

8.65

-2.23

-1.02

SQFPNLTP

8.71

-3.75

-2.54

Q03306

EEKPFRIP

6.44

-4.40

-3.19

PNVPPLQT

8.52

-4.06

-2.85

KSIPRTKP

9.17

-2.19

-0.98

P34758

PPPPPRAQ

8.46

-4.61

-3.40

PNKPNYGM

8.71

-3.80

-2.59

HSQPNKPN

9.78

-1.52

-0.31

P53933

RRRPPPPP

6.90

-3.04

-1.83

VAPPPLPN

8.06

-4.17

-2.96

RRPPPPPI

8.38

-3.39

-2.18

P32381

LTEPPMNP

10.00

-2.83

-1.62

TEPPMNPL

11.70

-2.23

-1.02

Q00453

YAPPYFPH

6.37

-4.50

-3.29

HQPPPLPI

7.93

-4.34

-3.13

LYAPPYFP

8.29

-3.97

-2.76

P40021

PLPPPLFP

6.78

-4.35

-3.14

LPPPLFPS

7.97

-4.25

-3.04

GPPPPLPP

8.82

-4.10

-2.89

P36150

IVVNPSSP

11.90

-1.98

-0.77

Q12446

PPPPPRRG

7.26

-4.40

-3.19

PPPPHRHV

7.62

-3.33

-2.12

PPPPAFLT

7.72

-4.79

-3.58

Q01560

YYPPPPPG

9.55

-3.08

-1.87

PEPQPYYP

9.62

-4.22

-3.01

PYYPPPPP

10.44

-3.04

-1.83

P00950

FDVPPPPI

9.99

-3.13

-1.92

DVPPPPID

10.31

-3.10

-1.89

VPPPPIDA

11.41

-2.84

-1.63

P53735

VPPPPRTR

7.45

-4.17

-2.96

KLVPPPPR

9.12

-3.93

-2.72

LVPPPPRT

9.67

-3.47

-2.26

P33334

SKMPTRFP

4.89

-4.67

-3.46

KMPTRFPP

8.16

-3.46

-2.25

PPPPGFEE

8.78

-4.74

-3.53

P40523

VGVPPLAP

8.61

-4.60

-3.39

PPHGPFST

9.68

-2.46

-1.25

MHNSPRNP

9.73

-2.83

-1.62

P40563

PPVPKKPS

9.34

-3.53

-2.32

PSERPKRR

10.05

-1.93

-0.72

PPPVPKKP

10.39

-2.08

-0.87

Q08989

KGPPPPPP

9.84

-2.92

-1.71

PPPPPPPP

11.18

-2.80

-1.59

GPPPPPPP

11.21

-2.74

-1.53

P37370

QNRPHMPS

7.45

-3.68

-2.47

PKPRPFQN

7.65

-4.47

-3.26

KVPQNRPH

8.28

-2.52

-1.31

P39743

ATIPEDNP

10.81

-1.95

-0.74

Q03900

PSGAPKLK

11.62

-0.39

0.82

NTPSGAPK

12.11

-1.10

0.11

 


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