ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-8.PDB
Scoring matrix: MYO3_1ZUY-8_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.33
Foldx random average score for Saccharomyces cerevisiae: 8.875

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213455
Proteins after random average filtering: 7178
 Total fragments: 1683754
Proteins after disorder filtering: 4663
 Total fragments: 100584
Proteins after pattern filtering: 2237
 Total fragments: 11882
Proteins after MINT filtering: 26
 Total fragments: 465


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

10.33

0.87

0.00

Best peptides

SMKPRFDW

0.00

-0.91

-1.78

         
Interactors      
P39113

HRGPRRPQ

4.83

-2.24

-3.11

PRRPQKNR

5.13

-2.25

-3.12

SPLGAPPP

5.49

-3.74

-4.61

P36150

VVNPSSPS

8.21

0.41

-0.46

P38822

APEVPPPR

4.95

-3.76

-4.63

PEVPPPRR

7.64

-1.62

-2.49

TPTTTPGS

7.97

-2.68

-3.55

P40341

SRNIPPPP

4.52

-2.81

-3.68

PPKPPLND

6.27

-2.23

-3.10

PPLNDPSN

7.03

-2.33

-3.20

Q08912

HPKGPPPP

5.79

-3.99

-4.86

PKGPPPPP

6.97

-2.79

-3.66

TPSWGPSP

7.11

-3.10

-3.97

P17555

PPRPKKPS

6.13

-2.81

-3.68

APAPPPPP

6.40

-4.14

-5.01

RPKKPSTL

7.58

-1.76

-2.63

P25604

PPKPKSPH

4.86

-1.58

-2.45

PPLPPPPP

5.57

-4.21

-5.08

PPLPPKPK

5.77

-2.75

-3.62

P47068

PPLPRAPP

4.37

-3.60

-4.47

LPEPISPE

5.35

-2.08

-2.95

DPSSNPFF

5.57

-2.26

-3.13

P04050

SYSPTSPN

6.47

-0.72

-1.59

SPNYSPTS

6.60

-1.95

-2.82

TCLPVPPP

6.63

-3.77

-4.64

P40450

SPKLFPRL

4.13

-3.78

-4.65

PQLPPPPP

5.95

-2.98

-3.85

PPLPDLFK

6.13

-2.06

-2.93

P40453

LRKRPPPP

5.37

-3.14

-4.01

PDLPIRLR

5.42

-2.10

-2.97

PPSWKPPD

5.70

-4.07

-4.94

P41832

SPAPPPPP

5.51

-3.84

-4.71

SSQPPPPP

6.81

-2.85

-3.72

KGETPPPP

7.24

-2.46

-3.33

Q12342

KAKAPPPP

6.39

-3.47

-4.34

AKAPPPPP

6.51

-3.58

-4.45

TPSTPSDG

7.97

-0.68

-1.55

P38237

DPFVPPPN

6.10

-3.33

-4.20

PPNVPKKD

7.03

-1.83

-2.70

FQIPSKPE

7.39

-1.97

-2.84

P53094

YPLKLPPL

4.55

-4.29

-5.16

PQSPIRAY

4.99

-2.27

-3.14

EPNEPPPP

5.71

-3.86

-4.73

Q01389

SQFPNLTP

5.27

-2.29

-3.16

RSKPLPPQ

5.42

-3.57

-4.44

SPSSSPPP

5.72

-3.10

-3.97

P40021

PPLPPPAR

4.84

-3.60

-4.47

PPLPPPLF

5.00

-3.85

-4.72

PPNHPHSQ

7.05

-0.55

-1.42

Q04439

SKKPAPPP

4.58

-3.40

-4.27

PKEPMFEA

5.37

-2.69

-3.56

SSKPKEPM

5.96

-1.55

-2.42

Q12446

NPFPFPVP

4.86

-4.03

-4.90

NPFPFPIP

4.90

-4.04

-4.91

FPFPIPEI

5.16

-3.38

-4.25

Q01560

PPEPQPYY

4.94

-3.35

-4.22

EPQPYYPP

5.05

-3.02

-3.89

QPYYPPPP

5.93

-3.93

-4.80

P00950

SFDVPPPP

7.00

-2.32

-3.19

FDVPPPPI

8.66

-1.03

-1.90

P33334

GPKFEPLY

4.46

-3.01

-3.88

SKMPTRFP

5.33

-2.97

-3.84

SGLPPPPP

5.97

-3.12

-3.99

P40523

PPLAPPPH

6.06

-2.69

-3.56

HNSPRNPD

6.07

-0.75

-1.62

TPLPTPVP

6.11

-3.84

-4.71

Q08989

HPKGPPPP

5.79

-3.99

-4.86

PKGPPPPP

6.97

-2.79

-3.66

NGDHPKGP

8.12

-1.41

-2.28

P37370

MPKPRPFQ

3.44

-2.99

-3.86

VPQNRPHM

3.86

-4.85

-5.72

SQMPKPRP

4.31

-3.69

-4.56

P39743

YSNPLTSP

7.39

-1.62

-2.49

NPLTSPVA

7.70

-1.90

-2.77

 


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