ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1ZUY-2.PDB
Scoring matrix: MYO3_1ZUY-2_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.38
Foldx random average score for Saccharomyces cerevisiae: 17.324

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199099
Proteins after random average filtering: 7178
 Total fragments: 1384071
Proteins after disorder filtering: 4491
 Total fragments: 91468
Proteins after pattern filtering: 2295
 Total fragments: 21085
Proteins after MINT filtering: 26
 Total fragments: 1076


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

19.38

-3.05

0.00

Best peptides

WRPRMFRDRW

0.00

-0.29

2.76

         
Interactors      
P39113

HRGPRRPQKN

10.64

-6.42

-3.37

GPRRPQKNRY

10.84

-5.21

-2.16

SPLGAPPPPP

11.43

-6.82

-3.77

P36150

PIVVNPSSPS

14.15

-4.78

-1.73

NPIVVNPSSP

14.84

-5.76

-2.71

P38822

DRGPAPEVPP

11.15

-5.95

-2.90

PAPEVPPPRR

12.78

-5.98

-2.93

APEVPPPRRS

12.79

-6.01

-2.96

P40341

SRNIPPPPPP

9.38

-7.29

-4.24

PPPPPPPPPK

10.72

-8.45

-5.40

PPPPPPPKPP

10.84

-9.65

-6.60

Q08912

HPKGPPPPPP

9.49

-9.26

-6.21

PKGPPPPPPP

9.64

-7.44

-4.39

PPPPPPPDEK

10.71

-8.92

-5.87

P17555

SKSGPPPRPK

9.88

-5.95

-2.90

PRPKKPSTLK

11.01

-5.78

-2.73

APPPPPPAPP

11.56

-8.34

-5.29

P25604

PKPKSPHLKP

9.88

-6.78

-3.73

LKPPLPPPPP

10.47

-7.07

-4.02

SPHLKPPLPP

11.07

-7.11

-4.06

P47068

PLPRAPPVPP

10.89

-8.33

-5.28

MPNTAPPLPR

11.17

-8.03

-4.98

HSHTAPSPPP

11.96

-4.25

-1.20

P04050

LPVPPPPVRP

12.28

-8.02

-4.97

SPGSPAYSPK

12.97

-4.46

-1.41

CLPVPPPPVR

13.13

-6.62

-3.57

P40450

PPPPPPPPPP

10.76

-9.36

-6.31

QLPPPPPPPP

11.12

-7.23

-4.18

PPPPPPPPPL

11.30

-8.30

-5.25

P40453

LRKRPPPPPP

7.98

-8.70

-5.65

IRLRKRPPPP

9.79

-4.41

-1.36

RLRKRPPPPP

10.10

-8.52

-5.47

P41832

QPPPPPPPPP

9.95

-8.14

-5.09

PKGETPPPPP

9.96

-7.33

-4.28

PPPPPPPPPP

10.76

-9.36

-6.31

Q12342

RKAKAPPPPP

7.92

-6.80

-3.75

AKAPPPPPPP

9.86

-6.80

-3.75

APPPPPPPPP

11.15

-8.52

-5.47

P38237

DPFVPPPNVP

12.26

-7.04

-3.99

DLNDPFVPPP

12.64

-5.39

-2.34

FVPPPNVPKK

13.62

-4.30

-1.25

P53094

FKSSAFPQSP

8.85

-5.65

-2.60

YPLKLPPLPL

8.89

-7.01

-3.96

TREPNEPPPP

11.88

-6.61

-3.56

Q01389

APKREAPKPP

11.00

-8.33

-5.28

PKREAPKPPA

11.07

-4.85

-1.80

PASPSYPSIF

11.70

-6.55

-3.50

P40021

TKNTGPPPPL

11.06

-5.12

-2.07

PPPLPPPLFP

11.71

-7.54

-4.49

NTGPPPPLPP

12.20

-5.86

-2.81

Q04439

PKEPMFEAAY

10.23

-4.75

-1.70

HSKKPAPPPP

10.26

-6.28

-3.23

SKPKEPMFEA

10.30

-4.19

-1.14

Q12446

TKHKAPPPPP

8.49

-7.12

-4.07

NRPVPPPPPM

9.07

-7.15

-4.10

HKAPPPPPPT

9.37

-6.35

-3.30

Q01560

EPQPYYPPPP

10.04

-7.26

-4.21

QPYYPPPPPG

11.17

-7.45

-4.40

YYPPPPPGEH

11.51

-5.96

-2.91

P00950

RSFDVPPPPI

13.33

-3.74

-0.69

FDVPPPPIDA

14.04

-2.78

0.27

SFDVPPPPID

14.63

-3.91

-0.86

P33334

MPTRFPPAVF

8.62

-7.31

-4.26

FTLPPPPPPP

10.32

-6.56

-3.51

EDTFLPPPPP

11.50

-3.78

-0.73

P40523

YMHNSPRNPD

11.96

-6.27

-3.22

PPHGPFSTSM

12.87

-5.14

-2.09

NITPLPTPVP

12.90

-4.52

-1.47

Q08989

HPKGPPPPPP

9.49

-9.26

-6.21

PKGPPPPPPP

9.64

-7.44

-4.39

PPPPPPPDEK

10.71

-8.92

-5.87

P37370

NRPHMPSVRP

8.40

-3.94

-0.89

NPTKSPPPPP

9.15

-8.44

-5.39

PKPRPFQNKT

9.43

-4.09

-1.04

P39743

PNATIPEDNP

14.02

-5.51

-2.46

PAYSNPLTSP

16.95

-3.78

-0.73

 


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