ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1YP5-5.PDB
Scoring matrix: MYO3_1YP5-5_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 17.59
Foldx random average score for Saccharomyces cerevisiae: 17.491

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199099
Proteins after random average filtering: 7177
 Total fragments: 1368328
Proteins after disorder filtering: 4520
 Total fragments: 112892
Proteins after pattern filtering: 2305
 Total fragments: 21437
Proteins after MINT filtering: 26
 Total fragments: 1112


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

17.59

-2.96

0.00

Best peptides

FPRWPRRDHP

0.00

-8.56

-5.60

         
Interactors      
P39113

SPLGAPPPPP

7.98

-9.14

-6.18

TALFTHPEGP

8.58

-6.04

-3.08

GPRRPQKNRY

9.16

-7.16

-4.20

P36150

NPIVVNPSSP

8.78

-8.19

-5.23

PIVVNPSSPS

14.86

-5.74

-2.78

P38822

NDRGPAPEVP

9.84

-4.05

-1.09

APEVPPPRRS

11.81

-7.52

-4.56

DRGPAPEVPP

12.62

-4.67

-1.71

P40341

SRNIPPPPPP

6.77

-8.05

-5.09

NIPPPPPPPP

7.34

-9.15

-6.19

PPPPPPPPKP

7.57

-9.65

-6.69

Q08912

HPKGPPPPPP

6.69

-9.68

-6.72

PKGPPPPPPP

8.36

-8.47

-5.51

HGDHPKGPPP

9.70

-5.21

-2.25

P17555

APPPPPPAPP

8.53

-9.73

-6.77

PPPRPKKPST

9.10

-5.98

-3.02

AAPAPPPPPP

9.96

-8.12

-5.16

P25604

SPHLKPPLPP

7.43

-9.09

-6.13

PLPPPPPPQP

8.75

-9.47

-6.51

PPLPPKPKSP

8.91

-7.85

-4.89

P47068

PLPRAPPVPP

7.37

-8.88

-5.92

THSHTAPSPP

7.78

-7.13

-4.17

PPALSAPSIP

8.53

-8.79

-5.83

P04050

CLPVPPPPVR

8.57

-5.40

-2.44

SPTSPAYSPT

10.90

-4.98

-2.02

SPGFSPTSPT

11.28

-4.19

-1.23

P40450

PPPPPPPPPP

8.05

-10.46

-7.50

PPPPPPPPLP

8.13

-9.91

-6.95

AVPPPPPPPP

8.78

-8.98

-6.02

P40453

PPSWKPPDLP

5.19

-10.05

-7.09

TPEIPPPLPP

6.92

-8.48

-5.52

IRLRKRPPPP

7.58

-6.94

-3.98

P41832

PPPPPPPPPP

8.05

-10.46

-7.50

SPAPPPPPPP

8.13

-9.05

-6.09

APPPPPPPPP

8.15

-9.77

-6.81

Q12342

APPPPPPPPP

8.15

-9.77

-6.81

AKAPPPPPPP

8.77

-8.17

-5.21

RKAKAPPPPP

10.60

-6.36

-3.40

P38237

DPFVPPPNVP

9.06

-7.99

-5.03

FQIPSKPENT

10.85

-3.40

-0.44

DLNDPFVPPP

11.74

-5.73

-2.77

P53094

FKSSAFPQSP

7.16

-6.86

-3.90

YPLKLPPLPL

9.46

-6.23

-3.27

PQTREPNEPP

9.46

-6.74

-3.78

Q01389

APKREAPKPP

7.47

-10.24

-7.28

SPSSSPPPIP

8.34

-8.49

-5.53

GIGEEAPTKP

8.56

-7.33

-4.37

P40021

PPPLPPPLFP

6.87

-7.18

-4.22

PPPPLPPPLF

9.36

-8.93

-5.97

AVLNSPPLPP

9.39

-8.30

-5.34

Q04439

NIPPPPPPPP

7.34

-9.15

-6.19

SRHSKKPAPP

8.05

-7.26

-4.30

PPPSSKPKEP

8.83

-8.24

-5.28

Q12446

GVRLPAPPPP

6.55

-8.27

-5.31

GRRGPAPPPP

7.17

-7.47

-4.51

NVPVAPPPPP

7.23

-8.00

-5.04

Q01560

YPPPPPGEHM

9.10

-7.40

-4.44

PQPYYPPPPP

9.41

-5.96

-3.00

APQESAPQEP

9.97

-7.72

-4.76

P00950

SFDVPPPPID

11.26

-7.69

-4.73

RRSFDVPPPP

11.62

-4.24

-1.28

FDVPPPPIDA

13.66

-2.03

0.93

P33334

TFLPPPPPPP

7.84

-8.66

-5.70

DFTLPPPPPP

8.36

-7.37

-4.41

DLALPPPPPP

8.51

-7.23

-4.27

P40523

PPLAPPPHGP

8.94

-8.46

-5.50

PVGVPPLAPP

9.40

-8.29

-5.33

PPGTVPNMQM

10.96

-6.65

-3.69

Q08989

HPKGPPPPPP

6.69

-9.68

-6.72

PKGPPPPPPP

8.36

-8.47

-5.51

NGDHPKGPPP

9.85

-5.69

-2.73

P37370

NPTKSPPPPP

6.78

-10.76

-7.80

NPPQAPPPPP

7.09

-8.75

-5.79

SMPAPPPPPP

7.89

-9.47

-6.51

P39743

PNATIPEDNP

12.02

-5.48

-2.52

PAYSNPLTSP

14.18

-6.20

-3.24

 


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