ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-5.PDB
Scoring matrix: MYO3_1RUW-5_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.64
Foldx random average score for Saccharomyces cerevisiae: 22.295

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199099
Proteins after random average filtering: 7178
 Total fragments: 1306438
Proteins after disorder filtering: 4441
 Total fragments: 78476
Proteins after pattern filtering: 2191
 Total fragments: 14821
Proteins after MINT filtering: 25
 Total fragments: 723


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

23.64

-1.62

0.00

Best peptides

RRNRHFWDHG

0.00

-2.86

-1.24

         
Interactors      
P39113

HRGPRRPQKN

13.42

-8.22

-6.60

GPRRPQKNRY

15.72

-5.26

-3.64

SHRGPRRPQK

16.50

-2.72

-1.10

P36150

NPIVVNPSSP

19.79

-6.15

-4.53

PIVVNPSSPS

21.44

-3.73

-2.11

P38822

DRGPAPEVPP

17.25

-4.32

-2.70

APEVPPPRRS

20.36

-4.70

-3.08

P40341

SRNIPPPPPP

13.15

-6.85

-5.23

IPPPPPPPPP

18.58

-8.41

-6.79

PPPPPKPPLN

18.83

-7.88

-6.26

Q08912

PKGPPPPPPP

15.41

-5.60

-3.98

DHPKGPPPPP

16.19

-7.16

-5.54

TPSWGPSPMG

17.17

-4.53

-2.91

P17555

PRPKKPSTLK

14.49

-3.53

-1.91

SKSGPPPRPK

16.32

-3.26

-1.64

PKKPSTLKTK

18.16

-0.43

1.19

P25604

PKPKSPHLKP

13.99

-4.53

-2.91

PHLKPPLPPP

16.18

-6.40

-4.78

LKPPLPPPPP

17.31

-5.63

-4.01

P47068

PLPRAPPVPP

13.59

-8.77

-7.15

DKVPPHPVPS

16.13

-4.95

-3.33

SRTLPPHVPS

16.41

-4.61

-2.99

P04050

SPTSPGYSPG

17.13

-5.58

-3.96

SPGSPAYSPK

18.00

-3.14

-1.52

PPVRPSISFN

18.33

-3.87

-2.25

P40450

PKLFPRLSSD

13.97

-4.46

-2.84

QLPPPPPPPP

16.91

-8.41

-6.79

KLPQLPPPPP

17.23

-7.31

-5.69

P40453

IRLRKRPPPP

6.40

-8.04

-6.42

LRKRPPPPPP

10.87

-8.69

-7.07

RLRKRPPPPP

11.90

-8.51

-6.89

P41832

PKGETPPPPP

15.54

-6.46

-4.84

KPKGETPPPP

18.31

-5.98

-4.36

QPPPPPPPPP

18.50

-8.28

-6.66

Q12342

RKAKAPPPPP

10.48

-6.20

-4.58

AKAPPPPPPP

15.48

-6.46

-4.84

APPPPPPPPP

19.11

-7.97

-6.35

P38237

DLNDPFVPPP

17.38

-6.51

-4.89

IPSKPENTVN

18.69

-3.51

-1.89

NFQIPSKPEN

19.09

-4.73

-3.11

P53094

FKSSAFPQSP

12.94

-5.65

-4.03

TREPNEPPPP

15.41

-6.71

-5.09

AKAPNTPSTS

17.43

-2.24

-0.62

Q01389

RRYPQTPSYY

12.56

-3.82

-2.20

APKREAPKPP

14.05

-8.47

-6.85

KREAPKPPAN

14.11

-6.98

-5.36

P40021

SLDFLPSTPS

17.57

-4.20

-2.58

PLPPPARSQS

17.70

-5.70

-4.08

DFLPSTPSQM

18.54

-3.69

-2.07

Q04439

SRHSKKPAPP

12.38

-8.61

-6.99

SKPKEPMFEA

14.16

-3.65

-2.03

SKKPAPPPPG

14.82

-6.02

-4.40

Q12446

RRGPAPPPPP

12.62

-7.08

-5.46

TKHKAPPPPP

12.91

-6.83

-5.21

PRRGPAPPPP

12.96

-7.78

-6.16

Q01560

QPYYPPPPPG

14.03

-9.89

-8.27

PEPQPYYPPP

17.32

-5.17

-3.55

PQPYYPPPPP

17.48

-6.25

-4.63

P00950

RRSFDVPPPP

14.23

-3.67

-2.05

SFDVPPPPID

19.06

-5.58

-3.96

P33334

SKMPTRFPPA

13.22

-5.10

-3.48

MPTRFPPAVF

13.70

-7.53

-5.91

TLPPPPPPPG

16.97

-8.42

-6.80

P40523

PRNPDTGTGP

16.71

-3.60

-1.98

PLAPPPHGPF

18.39

-5.59

-3.97

YMHNSPRNPD

18.45

-5.87

-4.25

Q08989

PKGPPPPPPP

15.41

-5.60

-3.98

DHPKGPPPPP

16.19

-7.16

-5.54

HPKGPPPPPP

18.36

-8.63

-7.01

P37370

QMPKPRPFQN

13.00

-7.01

-5.39

PKPRPFQNKT

14.03

-3.52

-1.90

KKATSAPAPP

15.12

-6.32

-4.70

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER