ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-20.PDB
Scoring matrix: MYO3_1RUW-20_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.31
Foldx random average score for Saccharomyces cerevisiae: 16.063

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206277
Proteins after random average filtering: 7178
 Total fragments: 1556728
Proteins after disorder filtering: 4518
 Total fragments: 63666
Proteins after pattern filtering: 1953
 Total fragments: 6220
Proteins after MINT filtering: 21
 Total fragments: 158


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.31

-3.45

0.00

Best peptides

RMPMRGHMW

0.00

-6.79

-3.34

         
Interactors      
P47068

YHPMPNTAP

11.27

-6.49

-3.04

YYVPPGIPT

13.25

-3.82

-0.37

DKVPPHPVP

13.69

-5.16

-1.71

P39113

HRGPRRPQK

10.15

-3.83

-0.38

FTHPEGPNC

11.54

-2.26

1.19

AMSPLGAPP

12.37

-5.04

-1.59

Q01389

KRSKPLPPQ

13.34

-4.60

-1.15

EEAPTKPNP

13.65

-4.95

-1.50

NIPSPSSSP

14.55

-1.89

1.56

P04050

SYSPTSPNY

14.25

-2.03

1.42

GVSSPGFSP

14.56

-2.86

0.59

NYSPTSPSY

14.70

-2.03

1.42

P40523

LGAPPGTVP

12.19

-5.09

-1.64

LAPPPHGPF

14.71

-4.86

-1.41

PHGPFSTSM

14.78

-2.90

0.55

P38237

FVPPPNVPK

15.67

-3.80

-0.35

P40450

SSPKLFPRL

11.88

-3.74

-0.29

VSSSPKLFP

13.96

-2.28

1.17

LVTPPAPPL

14.20

-4.98

-1.53

P40453

WKPPDLPIR

10.00

-4.40

-0.95

PDLPIRLRK

13.78

-2.81

0.64

AWDCPRCGP

15.01

-4.09

-0.64

Q08989

GDHPKGPPP

13.62

-4.33

-0.88

P38822

RGPAPEVPP

14.27

-3.67

-0.22

Q04439

SSKPKEPMF

11.87

-4.36

-0.91

GSGSPSELP

13.40

-2.93

0.52

HSKKPAPPP

13.89

-4.49

-1.04

P37370

KVPQNRPHM

8.77

-3.84

-0.39

AVTPGGPLP

9.68

-4.28

-0.83

QMPKPRPFQ

10.33

-4.75

-1.30

P40021

SHPPNHPHS

12.88

-1.74

1.71

LNSPPLPPP

14.50

-5.34

-1.89

PLPPPARSQ

15.65

-3.26

0.19

Q12446

SNPFPFPIP

11.05

-3.69

-0.24

SQPQSNPFP

12.90

-3.84

-0.39

QSAPSAPIP

12.91

-4.20

-0.75

Q01560

HHQPPEPQP

11.56

-4.29

-0.84

PDAPQEPQV

14.74

-3.25

0.20

PQEPPAPQE

14.93

-2.61

0.84

P39743

NATIPEDNP

13.82

-4.49

-1.04

AYSNPLTSP

15.78

-3.34

0.11

Q08912

YTPSWGPSP

10.77

-4.53

-1.08

GDHPKGPPP

13.62

-4.33

-0.88

VCYTPSWGP

14.06

-2.32

1.13

P17555

RPKKPSTLK

14.40

-2.98

0.47

SGPPPRPKK

14.57

-3.99

-0.54

PAPPASVFE

15.74

-2.09

1.36

P53094

LKLPPLPLT

10.84

-4.82

-1.37

SAFPQSPIR

12.51

-3.16

0.29

DEDPVSPKP

13.72

-3.27

0.18

P33334

GGPKFEPLY

11.24

-3.53

-0.08

NAIPGGPKF

11.97

-3.39

0.06

LFFDPSLNP

12.34

-3.22

0.23

P25604

HLKPPLPPP

14.08

-6.22

-2.77

DGSSPHSIP

14.37

-1.99

1.46

PSLPPKPNT

15.70

-3.90

-0.45

 


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