ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-2.PDB
Scoring matrix: MYO3_1RUW-2_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.09
Foldx random average score for Saccharomyces cerevisiae: 21.024

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199099
Proteins after random average filtering: 7178
 Total fragments: 1443960
Proteins after disorder filtering: 4467
 Total fragments: 86970
Proteins after pattern filtering: 2279
 Total fragments: 20102
Proteins after MINT filtering: 26
 Total fragments: 1020


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

23.09

0.82

0.00

Best peptides

WRRRMFRDRW

0.00

-2.40

-3.22

         
Interactors      
P39113

PLGAPPPPPH

12.51

-7.10

-7.92

GPRRPQKNRY

12.60

-3.48

-4.30

HRGPRRPQKN

12.74

-3.77

-4.59

P36150

PIVVNPSSPS

17.25

-3.71

-4.53

NPIVVNPSSP

18.98

-2.84

-3.66

P38822

DRGPAPEVPP

12.84

-3.16

-3.98

APEVPPPRRS

16.73

-4.73

-5.55

PAPEVPPPRR

17.17

-5.09

-5.91

P40341

SRNIPPPPPP

10.53

-4.95

-5.77

NIPPPPPPPP

14.20

-5.49

-6.31

PPPPPPPKPP

15.16

-6.47

-7.29

Q08912

PKGPPPPPPP

11.08

-5.69

-6.51

HPKGPPPPPP

13.56

-6.92

-7.74

PPPPPPPDEK

15.33

-6.01

-6.83

P17555

SKSGPPPRPK

11.69

-5.16

-5.98

PRPKKPSTLK

13.05

-3.27

-4.09

PPPRPKKPST

15.47

-3.54

-4.36

P25604

LKPPLPPPPP

12.07

-5.89

-6.71

PLPPKPKSPH

12.37

-6.02

-6.84

PKPKSPHLKP

12.99

-3.48

-4.30

P47068

PLPRAPPVPP

9.79

-7.71

-8.53

SRTLPPHVPS

12.75

-3.49

-4.31

DKVPPHPVPS

14.31

-4.52

-5.34

P04050

CLPVPPPPVR

13.79

-5.61

-6.43

PPVRPSISFN

16.28

-3.33

-4.15

SPSYSPTSPA

16.35

-3.80

-4.62

P40450

QLPPPPPPPP

12.58

-6.62

-7.44

KLPQLPPPPP

13.19

-5.92

-6.74

PPPPPPPPPP

15.00

-6.42

-7.24

P40453

IRLRKRPPPP

6.90

-5.72

-6.54

LRKRPPPPPP

7.10

-5.89

-6.71

RLRKRPPPPP

11.65

-7.67

-8.49

P41832

PKGETPPPPP

11.74

-5.61

-6.43

QPPPPPPPPP

14.51

-6.99

-7.81

PPPPPPPPPM

14.96

-7.86

-8.68

Q12342

RKAKAPPPPP

9.85

-6.76

-7.58

AKAPPPPPPP

11.09

-5.54

-6.36

APPPPPPPPP

15.17

-6.50

-7.32

P38237

DLNDPFVPPP

14.62

-5.61

-6.43

DPFVPPPNVP

17.03

-2.98

-3.80

QIPSKPENTV

17.88

-0.71

-1.53

P53094

FKSSAFPQSP

10.55

-4.82

-5.64

PQTREPNEPP

13.21

-5.04

-5.86

TREPNEPPPP

13.52

-2.97

-3.79

Q01389

PKREAPKPPA

12.44

-4.23

-5.05

APKREAPKPP

12.76

-7.08

-7.90

GRRYPQTPSY

12.94

-3.12

-3.94

P40021

TKNTGPPPPL

12.93

-5.41

-6.23

FLPSTPSQMN

13.63

-4.98

-5.80

SLDFLPSTPS

15.17

-3.07

-3.89

Q04439

SKPKEPMFEA

11.99

-4.62

-5.44

PKEPMFEAAY

12.34

-3.96

-4.78

SKKPAPPPPG

12.58

-5.33

-6.15

Q12446

NRPVPPPPPM

9.99

-6.10

-6.92

RRGPAPPPPP

10.57

-4.33

-5.15

HKAPPPPPPT

10.65

-5.80

-6.62

Q01560

PQPYYPPPPP

13.95

-4.81

-5.63

QPYYPPPPPG

14.33

-7.25

-8.07

EPQPYYPPPP

14.95

-4.36

-5.18

P00950

RRSFDVPPPP

16.44

-4.95

-5.77

RSFDVPPPPI

18.08

-5.24

-6.06

SFDVPPPPID

18.65

-1.97

-2.79

P33334

MPTRFPPAVF

10.10

-5.29

-6.11

FLPPPPPPPS

12.62

-6.81

-7.63

SKMPTRFPPA

12.90

-2.60

-3.42

P40523

PLAPPPHGPF

13.32

-5.84

-6.66

YMHNSPRNPD

13.40

-5.08

-5.90

MLGAPPGTVP

15.38

-2.87

-3.69

Q08989

PKGPPPPPPP

11.08

-5.69

-6.51

HPKGPPPPPP

13.56

-6.92

-7.74

PPPPPPPDEK

15.33

-6.01

-6.83

P37370

NRPHMPSVRP

9.70

-1.41

-2.23

PKPRPFQNKT

10.84

-4.62

-5.44

HKSPSQPPLP

12.45

-4.08

-4.90

P39743

PNATIPEDNP

19.01

-2.18

-3.00

 


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