ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-16.PDB
Scoring matrix: MYO3_1RUW-16_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.24
Foldx random average score for Saccharomyces cerevisiae: 16.013

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206277
Proteins after random average filtering: 7178
 Total fragments: 1734607
Proteins after disorder filtering: 4674
 Total fragments: 104943
Proteins after pattern filtering: 2225
 Total fragments: 11445
Proteins after MINT filtering: 26
 Total fragments: 455


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.24

2.08

0.00

Best peptides

RRPIPGRRF

0.00

-2.86

-4.94

         
Interactors      
P39113

ASHRGPRRP

8.89

-0.74

-2.82

MSPLGAPPP

11.05

-3.31

-5.39

RGPRRPQKN

11.39

-2.22

-4.30

P36150

PIVVNPSSP

13.94

-2.74

-4.82

P38822

RGPAPEVPP

13.47

-1.55

-3.63

PEVPPPRRS

13.61

-0.62

-2.70

VGDTPTTTP

14.83

-1.23

-3.31

P40341

SRNIPPPPP

10.47

-2.31

-4.39

RNIPPPPPP

13.71

-1.87

-3.95

NDPSNPVSK

15.01

-0.80

-2.88

Q08912

YTPSWGPSP

11.73

-0.98

-3.06

VCYTPSWGP

12.56

-0.64

-2.72

DHPKGPPPP

13.76

-0.92

-3.00

P17555

SKSGPPPRP

12.04

-0.60

-2.68

RPKKPSTLK

14.35

-1.02

-3.10

KSGPPPRPK

14.99

0.33

-1.75

P25604

PKPKSPHLK

12.02

-1.81

-3.89

QAPSLPPKP

12.34

-0.52

-2.60

QEQNTPPLP

13.49

-0.84

-2.92

P47068

SRTLPPHVP

8.99

-2.40

-4.48

YHPMPNTAP

9.22

-2.94

-5.02

PLPRAPPVP

11.49

-2.38

-4.46

P04050

YSPTSPNYS

12.32

0.53

-1.55

YSPTSPSYS

12.84

-0.77

-2.85

YSPTSPGYS

13.01

-0.41

-2.49

P40450

KLPQLPPPP

11.67

-2.84

-4.92

HDLVTPPAP

12.36

-1.16

-3.24

CGAVPPPPP

13.77

-2.48

-4.56

P40453

LRKRPPPPP

9.05

-2.92

-5.00

RLRKRPPPP

9.79

-2.95

-5.03

RKRPPPPPP

12.53

-1.71

-3.79

P41832

LSSQPPPPP

12.58

-1.06

-3.14

KGETPPPPP

13.20

-2.45

-4.53

TDGVIPPAP

13.91

-1.61

-3.69

Q12342

RKAKAPPPP

9.74

-2.80

-4.88

KAKAPPPPP

14.03

-1.41

-3.49

KAPPPPPPP

14.72

-1.48

-3.56

P38237

NFQIPSKPE

13.13

-1.08

-3.16

ENFQIPSKP

13.17

-0.51

-2.59

PDLNDPFVP

14.25

-0.21

-2.29

P53094

AFPQSPIRA

11.01

-0.75

-2.83

REPNEPPPP

11.53

-3.89

-5.97

ADAKAPNTP

12.24

-1.24

-3.32

Q01389

RYPQTPSYY

10.00

-1.22

-3.30

KRSKPLPPQ

11.32

-1.44

-3.52

TEPSTPSRP

12.08

-1.07

-3.15

P40021

NYVISPNLP

11.09

-1.91

-3.99

FLPSTPSQM

11.88

-2.83

-4.91

LDFLPSTPS

13.09

-1.75

-3.83

Q04439

RHSKKPAPP

11.40

-1.70

-3.78

HSKKPAPPP

11.69

-1.21

-3.29

QANIPPPPP

11.98

-2.39

-4.47

Q12446

NRPVPPPPP

10.63

-2.07

-4.15

PFPVPQQQF

10.73

-2.68

-4.76

RLPAPPPPP

11.27

-3.65

-5.73

Q01560

PEPQPYYPP

13.55

-1.05

-3.13

HHQPPEPQP

13.59

-0.07

-2.15

SAPQEPPAP

13.80

-0.15

-2.23

P00950

RSFDVPPPP

13.56

-2.58

-4.66

P33334

LFFDPSLNP

10.96

-1.52

-3.60

MSGLPPPPP

11.10

-3.62

-5.70

DLALPPPPP

11.84

-3.12

-5.20

P40523

YMHNSPRNP

8.40

-1.33

-3.41

GGPLASPTH

12.24

-3.96

-6.04

ENITPLPTP

12.36

-0.57

-2.65

Q08989

DHPKGPPPP

13.76

-0.92

-3.00

TNGDHPKGP

14.59

-0.50

-2.58

NGDHPKGPP

15.09

-1.16

-3.24

P37370

VSQMPKPRP

9.50

-2.08

-4.16

LAPLPPPPP

10.39

-4.14

-6.22

RPHMPSVRP

10.60

-4.40

-6.48

P39743

NATIPEDNP

11.42

-1.69

-3.77

AYSNPLTSP

12.38

-0.57

-2.65

SNPLTSPVA

13.45

-1.02

-3.10

 


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