ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-13.PDB
Scoring matrix: MYO3_1RUW-13_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.99
Foldx random average score for Saccharomyces cerevisiae: 13.103

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213455
Proteins after random average filtering: 7178
 Total fragments: 1476044
Proteins after disorder filtering: 4585
 Total fragments: 65971
Proteins after pattern filtering: 1851
 Total fragments: 6406
Proteins after MINT filtering: 25
 Total fragments: 188


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

16.99

-0.44

0.00

Best peptides

YKRWFPFH

0.00

-6.09

-5.65

         
Interactors      
P39113

RGPRRPQK

7.62

-6.10

-5.66

LGAPPPPP

11.57

-6.10

-5.66

PLGAPPPP

12.03

-5.87

-5.43

P25604

PLPPKPKS

9.47

-5.57

-5.13

LKPPLPPP

10.14

-5.31

-4.87

SLPPKPNT

10.27

-4.37

-3.93

P38822

RGPAPEVP

11.84

-5.19

-4.75

PEVPPPRR

13.04

-6.20

-5.76

P40341

RNIPPPPP

11.90

-5.52

-5.08

SRNIPPPP

12.54

-6.64

-6.20

PLNDPSNP

12.58

-4.38

-3.94

Q08912

KGPPPPPP

11.44

-5.92

-5.48

PKGPPPPP

11.68

-5.48

-5.04

HGDHPKGP

12.93

-4.23

-3.79

P17555

PKKPSTLK

11.02

-2.99

-2.55

SGPPPRPK

11.96

-3.52

-3.08

PRPKKPST

12.96

-3.91

-3.47

Q12342

AKAPPPPP

11.41

-5.27

-4.83

P47068

PLPRAPPV

9.65

-4.96

-4.52

TLPPHVPS

10.51

-4.19

-3.75

ALSAPSIP

10.80

-5.67

-5.23

P04050

CLPVPPPP

10.31

-6.37

-5.93

YGEAPTSP

11.68

-4.85

-4.41

P40450

PKLFPRLS

6.42

-6.67

-6.23

KLPQLPPP

8.12

-6.06

-5.62

QLPPPPPP

10.54

-6.13

-5.69

P40453

LRKRPPPP

9.79

-6.87

-6.43

RKRPPPPP

9.96

-6.52

-6.08

TKVPEPPS

11.13

-3.93

-3.49

P41832

KGETPPPP

11.13

-5.63

-5.19

DGVIPPAP

11.49

-6.25

-5.81

LSSQPPPP

11.77

-5.36

-4.92

P38237

NFQIPSKP

10.64

-5.60

-5.16

LNDPFVPP

11.79

-2.90

-2.46

DLNDPFVP

11.96

-4.93

-4.49

P53094

KLPPLPLT

7.06

-6.65

-6.21

PLKLPPLP

7.46

-7.34

-6.90

LKLPPLPL

9.78

-4.91

-4.47

Q01389

SKPLPPQL

7.62

-6.75

-6.31

PLPPQLLS

9.97

-4.17

-3.73

RYPQTPSY

10.46

-3.65

-3.21

P40021

PLPPPLFP

9.13

-6.45

-6.01

VLNSPPLP

9.67

-5.93

-5.49

FLPSTPSQ

10.26

-3.52

-3.08

Q04439

SKPKEPMF

7.44

-6.43

-5.99

KKPAPPPP

10.00

-5.67

-5.23

SNARPSPP

10.29

-3.67

-3.23

Q12446

PLPQLPNR

7.92

-5.45

-5.01

PLPDPPQH

9.22

-6.62

-6.18

KHSLPPLP

9.46

-6.18

-5.74

Q01560

PEPQPYYP

10.54

-5.35

-4.91

YYPPPPPG

11.55

-7.23

-6.79

QHHQPPEP

11.74

-3.92

-3.48

P00950

FDVPPPPI

12.59

-5.17

-4.73

P33334

FLPPPPPP

9.65

-6.87

-6.43

DLALPPPP

10.00

-7.27

-6.83

SKMPTRFP

10.09

-3.88

-3.44

P40523

PLASPTHY

9.56

-5.85

-5.41

PGTVPNMQ

9.84

-5.98

-5.54

PLAPPPHG

10.03

-6.27

-5.83

Q08989

KGPPPPPP

11.44

-5.92

-5.48

PKGPPPPP

11.68

-5.48

-5.04

NGDHPKGP

12.98

-3.75

-3.31

P37370

PKPRPFQN

6.49

-5.95

-5.51

NLEKPPSP

9.76

-6.79

-6.35

PQNRPHMP

10.43

-6.54

-6.10

P39743

SNPLTSPV

12.02

-2.24

-1.80

 


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