ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1RUW-10.PDB
Scoring matrix: MYO3_1RUW-10_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.77
Foldx random average score for Saccharomyces cerevisiae: 13.143

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213455
Proteins after random average filtering: 7178
 Total fragments: 2060780
Proteins after disorder filtering: 4842
 Total fragments: 145306
Proteins after pattern filtering: 2310
 Total fragments: 13911
Proteins after MINT filtering: 26
 Total fragments: 599


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

10.77

2.16

0.00

Best peptides

MRRVGWWR

0.00

-1.69

-3.85

         
Interactors      
P39113

MSPLGAPP

7.54

-0.45

-2.61

PRRPQKNR

9.04

1.40

-0.76

THPEGPNC

9.49

0.17

-1.99

P36150

IVVNPSSP

11.07

-1.47

-3.63

VVNPSSPS

12.06

1.71

-0.45

P38822

PEVPPPRR

6.73

-2.06

-4.22

RGPAPEVP

10.65

-0.59

-2.75

P40341

RNIPPPPP

9.73

-2.84

-5.00

PLNDPSNP

10.68

-1.10

-3.26

NIPPPPPP

10.81

-2.63

-4.79

Q08912

CYTPSWGP

10.06

1.45

-0.71

PKGPPPPP

10.51

-2.79

-4.95

DHPKGPPP

10.58

-1.17

-3.33

P17555

KSGPPPRP

8.63

-2.05

-4.21

PAPPASVF

8.66

-0.62

-2.78

PKKPSTLK

8.68

0.30

-1.86

P25604

QDQAPSLP

8.59

-0.23

-2.39

HLKPPLPP

9.27

-0.34

-2.50

PKPKSPHL

9.41

-0.40

-2.56

P47068

YVPPGIPT

7.52

-0.39

-2.55

EDKVPPHP

7.75

-0.36

-2.52

PAPPAPLA

7.81

-0.31

-2.47

P04050

PTSPGYSP

7.08

-0.07

-2.23

VSSPGFSP

7.57

-0.01

-2.17

PTSPGFGV

7.63

-0.59

-2.75

P40450

IAAPAPPP

9.20

-0.91

-3.07

QLPPPPPP

9.38

-1.26

-3.42

VTPPAPPL

9.43

0.46

-1.70

P40453

PEIPPPLP

8.50

-1.77

-3.93

PEPPSWKP

8.60

-0.75

-2.91

RKRPPPPP

8.76

-3.38

-5.54

P41832

VIPPAPPM

8.67

-0.98

-3.14

GDSPAPPP

8.80

-0.18

-2.34

GETPPPPP

10.98

-1.53

-3.69

Q12342

KAPPPPPP

10.31

-2.75

-4.91

AKAPPPPP

10.79

-2.21

-4.37

LETPSTPS

10.88

1.30

-0.86

P38237

FVPPPNVP

9.31

-2.92

-5.08

PFVPPPNV

9.62

-1.93

-4.09

NFQIPSKP

10.57

-1.11

-3.27

P53094

AFPQSPIR

8.28

0.63

-1.53

PLKLPPLP

8.43

-2.75

-4.91

EDPVSPKP

8.68

0.04

-2.12

Q01389

PSYPSIFR

7.78

1.10

-1.06

PKPPANTS

9.05

0.17

-1.99

SRPVPPDS

9.37

-1.18

-3.34

P40021

PLPPPLFP

8.44

-1.07

-3.23

PLPPPARS

8.74

-2.88

-5.04

LDFLPSTP

8.86

-0.83

-2.99

Q04439

SKKPAPPP

8.95

-0.09

-2.25

NIPTPPQN

10.26

-1.55

-3.71

KKPAPPPP

10.28

-2.80

-4.96

Q12446

RRGPAPPP

7.00

-2.57

-4.73

VRLPAPPP

7.96

-1.68

-3.84

PTTPAPAL

8.50

1.09

-1.07

Q01560

QEPPAPQE

7.00

-0.88

-3.04

QAPDAPQE

8.69

-1.12

-3.28

HQPPEPQP

9.28

1.60

-0.56

P00950

FDVPPPPI

9.11

-1.53

-3.69

DVPPPPID

9.97

-0.68

-2.84

SFDVPPPP

10.71

-1.91

-4.07

P33334

AIPGGPKF

7.04

-1.93

-4.09

NAIPGGPK

8.05

-0.52

-2.68

FFDPSLNP

8.86

-0.59

-2.75

P40523

GAPPGTVP

7.69

-0.10

-2.26

PVPVGVPP

7.87

-1.37

-3.53

PLAPPPHG

8.11

-0.87

-3.03

Q08989

PKGPPPPP

10.51

-2.79

-4.95

DHPKGPPP

10.58

-1.17

-3.33

KGPPPPPP

10.76

-0.92

-3.08

P37370

VTPGGPLP

7.22

0.00

-2.16

PALPGHVP

7.27

-0.44

-2.60

SIPLAPLP

7.42

-0.21

-2.37

P39743

ATIPEDNP

11.55

1.92

-0.24

 


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