ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1R6S-4.PDB
Scoring matrix: MYO3_1R6S-4_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.13
Foldx random average score for Saccharomyces cerevisiae: 18.019

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199099
Proteins after random average filtering: 7178
 Total fragments: 1469667
Proteins after disorder filtering: 4522
 Total fragments: 102244
Proteins after pattern filtering: 2310
 Total fragments: 22767
Proteins after MINT filtering: 26
 Total fragments: 1165


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

19.13

-4.34

0.00

Best peptides

WPPRRFRERW

0.00

-3.54

0.80

         
Interactors      
P39113

GPRRPQKNRY

7.88

-4.50

-0.16

ASHRGPRRPQ

9.22

-3.81

0.53

SPLGAPPPPP

10.62

-7.23

-2.89

P36150

NPIVVNPSSP

14.31

-4.57

-0.23

PIVVNPSSPS

15.18

-5.55

-1.21

P38822

PAPEVPPPRR

11.85

-7.08

-2.74

APEVPPPRRS

12.08

-6.45

-2.11

DRGPAPEVPP

14.44

-5.67

-1.33

P40341

NIPPPPPPPP

9.18

-7.40

-3.06

PPPPPPPPKP

9.50

-9.23

-4.89

PPPPPPPPPK

9.68

-8.75

-4.41

Q08912

HPKGPPPPPP

7.77

-9.35

-5.01

PPPPPPPDEK

10.05

-8.20

-3.86

PKGPPPPPPP

10.38

-8.15

-3.81

P17555

APPPPPPAPP

9.95

-8.40

-4.06

KSGPPPRPKK

10.23

-5.97

-1.63

GSKSGPPPRP

11.25

-5.32

-0.98

P25604

KPPLPPPPPP

9.36

-8.34

-4.00

NTPPLPPKPK

10.57

-6.59

-2.25

LKPPLPPPPP

10.98

-7.57

-3.23

P47068

PLPRAPPVPP

8.82

-9.91

-5.57

PVPPTPPAPP

10.63

-7.24

-2.90

MPNTAPPLPR

10.68

-8.14

-3.80

P04050

LPVPPPPVRP

10.61

-8.45

-4.11

PPVRPSISFN

12.87

-4.06

0.28

FSPTSPTYSP

12.96

-3.69

0.65

P40450

PPPPPPPPPP

9.31

-9.37

-5.03

PPPPPPPPPL

10.09

-8.64

-4.30

AVPPPPPPPP

10.17

-7.50

-3.16

P40453

LRKRPPPPPP

8.41

-9.14

-4.80

PPPPPPVSMP

10.64

-7.32

-2.98

TPEIPPPLPP

10.87

-8.03

-3.69

P41832

QPPPPPPPPP

8.55

-8.25

-3.91

PPPPPPPPPP

9.31

-9.37

-5.03

APPPPPPPPP

9.46

-8.89

-4.55

Q12342

APPPPPPPPP

9.46

-8.89

-4.55

AKAPPPPPPP

10.38

-6.37

-2.03

RKAKAPPPPP

10.49

-7.19

-2.85

P38237

FVPPPNVPKK

11.45

-5.06

-0.72

DLNDPFVPPP

12.16

-6.67

-2.33

DPFVPPPNVP

13.33

-5.51

-1.17

P53094

YPLKLPPLPL

9.92

-8.02

-3.68

FKSSAFPQSP

10.13

-5.92

-1.58

PQTREPNEPP

10.31

-6.24

-1.90

Q01389

APKREAPKPP

8.92

-8.09

-3.75

GSGRRYPQTP

10.89

-3.03

1.31

PSSSPPPIPK

11.36

-5.63

-1.29

P40021

PPPPLPPPLF

10.03

-9.29

-4.95

NTGPPPPLPP

10.78

-6.39

-2.05

PPPLPPPLFP

11.29

-7.37

-3.03

Q04439

NIPPPPPPPP

9.18

-7.40

-3.06

PPSSKPKEPM

10.00

-6.43

-2.09

HSKKPAPPPP

10.42

-5.22

-0.88

Q12446

PPRRGPAPPP

8.35

-8.25

-3.91

FPFPVPQQQF

9.06

-6.67

-2.33

PPPRRGPAPP

9.23

-6.83

-2.49

Q01560

PQPYYPPPPP

9.22

-6.66

-2.32

EPQPYYPPPP

9.24

-6.32

-1.98

QPYYPPPPPG

9.47

-8.79

-4.45

P00950

RSFDVPPPPI

11.51

-4.78

-0.44

DVPPPPIDAS

14.00

-3.64

0.70

FDVPPPPIDA

14.89

-3.88

0.46

P33334

MPTRFPPAVF

8.02

-9.48

-5.14

FTLPPPPPPP

8.59

-8.06

-3.72

AIPGGPKFEP

10.67

-7.31

-2.97

P40523

YMHNSPRNPD

11.43

-6.78

-2.44

GVPPLAPPPH

11.95

-5.36

-1.02

PPLAPPPHGP

12.50

-5.87

-1.53

Q08989

HPKGPPPPPP

7.77

-9.35

-5.01

PPPPPPPDEK

10.05

-8.20

-3.86

PKGPPPPPPP

10.38

-8.15

-3.81

P37370

PKPRPFQNKT

8.14

-4.75

-0.41

MPAPPPPPPP

8.89

-9.17

-4.83

APPPPPPPPP

9.46

-8.89

-4.55

P39743

PNATIPEDNP

15.90

-5.92

-1.58

PAYSNPLTSP

16.45

-4.41

-0.07

 


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