ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1R6S-27.PDB
Scoring matrix: MYO3_1R6S-27_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 13.1
Foldx random average score for Saccharomyces cerevisiae: 12.505

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206277
Proteins after random average filtering: 7178
 Total fragments: 1798177
Proteins after disorder filtering: 4731
 Total fragments: 134828
Proteins after pattern filtering: 2253
 Total fragments: 14558
Proteins after MINT filtering: 26
 Total fragments: 638


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAAA

13.10

-3.05

0.00

Best peptides

RRRYWPFWR

0.00

0.33

3.38

         
Interactors      
P39113

RGPRRPQKN

4.39

-4.89

-1.84

LFTHPEGPN

6.76

-5.52

-2.47

SHRGPRRPQ

7.88

-3.28

-0.23

P36150

IVVNPSSPS

7.32

-5.50

-2.45

P38822

RGPAPEVPP

6.18

-5.90

-2.85

PAPEVPPPR

9.53

-4.21

-1.16

VGDTPTTTP

11.03

0.01

3.06

P40341

NSRNIPPPP

7.52

-4.84

-1.79

RNIPPPPPP

8.82

-7.07

-4.02

IPPPPPPPP

9.56

-7.40

-4.35

Q08912

HPKGPPPPP

7.94

-5.84

-2.79

HGDHPKGPP

8.04

-5.23

-2.18

KGPPPPPPP

9.29

-7.23

-4.18

P17555

AAPAPPPPP

6.92

-6.68

-3.63

ATAAPAPPP

8.03

-5.99

-2.94

PPPRPKKPS

8.29

-6.54

-3.49

P25604

QDQAPSLPP

5.92

-5.77

-2.72

KSPHLKPPL

6.48

-5.67

-2.62

KPKSPHLKP

7.11

-3.49

-0.44

P47068

LPRAPPVPP

6.48

-6.56

-3.51

TPPAPPAPP

6.99

-4.86

-1.81

ALSAPSIPP

7.19

-4.98

-1.93

P04050

YGEAPTSPG

6.91

-5.33

-2.28

APTSPGFGV

8.71

-3.96

-0.91

SPTSPSYSP

8.92

-2.17

0.88

P40450

TPPAPPLPN

5.18

-5.35

-2.30

CIAAPAPPP

7.96

-5.97

-2.92

AAPAPPPLP

8.13

-5.80

-2.75

P40453

LRKRPPPPP

3.59

-6.77

-3.72

KVPEPPSWK

5.15

-4.29

-1.24

MPTTPEIPP

5.52

-4.70

-1.65

P41832

KGETPPPPP

6.19

-4.79

-1.74

IPPAPPMMP

6.89

-6.74

-3.69

DSPAPPPPP

6.94

-6.00

-2.95

Q12342

KAKAPPPPP

5.90

-6.96

-3.91

RKAKAPPPP

8.40

-5.25

-2.20

KAPPPPPPP

9.97

-6.82

-3.77

P38237

LNDPFVPPP

10.38

-5.46

-2.41

QIPSKPENT

10.55

-4.53

-1.48

NDPFVPPPN

10.69

-4.54

-1.49

P53094

REPNEPPPP

5.89

-5.66

-2.61

EPNEPPPPC

6.49

-5.86

-2.81

QTREPNEPP

6.68

-4.41

-1.36

Q01389

KREAPKPPA

5.67

-6.61

-3.56

GRRYPQTPS

5.91

-4.14

-1.09

TPSRPVPPD

6.41

-5.81

-2.76

P40021

KNTGPPPPL

6.46

-6.25

-3.20

YVISPNLPT

6.51

-5.64

-2.59

VLNSPPLPP

6.66

-4.86

-1.81

Q04439

KKPAPPPPG

5.50

-7.69

-4.64

SNARPSPPT

6.21

-6.14

-3.09

KPKEPMFEA

6.26

-4.98

-1.93

Q12446

RGPAPPPPP

3.96

-7.32

-4.27

RNNRPVPPP

4.09

-6.25

-3.20

RLPAPPPPP

4.66

-7.10

-4.05

Q01560

QPYYPPPPP

4.96

-5.09

-2.04

APQEPPAPQ

6.98

-3.58

-0.53

APDAPQEPQ

7.90

-5.48

-2.43

P00950

RSFDVPPPP

7.34

-4.71

-1.66

FDVPPPPID

10.42

-6.31

-3.26

DVPPPPIDA

12.17

-3.74

-0.69

P33334

KMPTRFPPA

7.38

-4.22

-1.17

SDLALPPPP

7.72

-5.84

-2.79

LFFDPSLNP

7.82

-3.51

-0.46

P40523

MHNSPRNPD

6.72

-5.73

-2.68

SSVTPQPPS

8.66

-4.47

-1.42

NSPRNPDTG

9.38

-2.55

0.50

Q08989

NGDHPKGPP

7.83

-5.12

-2.07

HPKGPPPPP

7.94

-5.84

-2.79

KGPPPPPPP

9.29

-7.23

-4.18

P37370

TSHAPPLPP

5.19

-5.83

-2.78

SSPAPPLPL

5.39

-5.50

-2.45

IPLAPLPPP

5.47

-7.24

-4.19

P39743

AYSNPLTSP

10.35

-3.59

-0.54

 


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