ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO3_1R6S-12.PDB
Scoring matrix: MYO3_1R6S-12_mat
Uniprot code: P36006
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.17
Foldx random average score for Saccharomyces cerevisiae: 11.229

Available information for P36006 in MINT (Nov 2008):
Nš of interacting proteins: 43
 Proteins belonging to other specie: 0
Nš of interactions described: 74
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3213455
Proteins after random average filtering: 7178
 Total fragments: 1350229
Proteins after disorder filtering: 4539
 Total fragments: 65094
Proteins after pattern filtering: 2140
 Total fragments: 11626
Proteins after MINT filtering: 26
 Total fragments: 683


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

14.17

-1.11

0.00

Best peptides

YRIPPKWR

0.00

-3.33

-2.22

         
Interactors      
P39113

PRRPQKNR

5.35

-2.94

-1.83

SHRGPRRP

7.86

-2.99

-1.88

HRGPRRPQ

7.97

-1.98

-0.87

P36150

IVVNPSSP

10.91

-2.11

-1.00

P38822

PEVPPPRR

8.16

-3.98

-2.87

RGPAPEVP

11.19

-1.25

-0.14

P40341

PPPPPKPP

7.23

-3.15

-2.04

RNIPPPPP

7.63

-3.34

-2.23

NIPPPPPP

9.14

-2.81

-1.70

Q08912

KGPPPPPP

8.81

-3.06

-1.95

CYTPSWGP

9.30

-3.00

-1.89

GPPPPPPP

10.23

-2.75

-1.64

P17555

SGPPPRPK

6.82

-3.75

-2.64

PPRPKKPS

7.53

-2.86

-1.75

PPPRPKKP

9.08

-3.26

-2.15

P25604

PSLPPKPN

7.07

-3.24

-2.13

HLKPPLPP

7.64

-3.61

-2.50

LPPKPKSP

7.83

-3.09

-1.98

P47068

DKVPPHPV

6.99

-4.71

-3.60

RTLPPHVP

8.20

-2.74

-1.63

PHVPSLTN

8.21

-4.08

-2.97

P04050

PAYSPKQD

8.04

-2.20

-1.09

PPPPVRPS

8.59

-3.24

-2.13

PVRPSISF

8.81

-2.52

-1.41

P40450

SSPKLFPR

6.99

-3.89

-2.78

PAPPPLPD

8.00

-4.06

-2.95

PKLFPRLS

8.16

-2.95

-1.84

P40453

WKPPDLPI

6.81

-3.93

-2.82

KRPPPPPP

7.28

-3.30

-2.19

RKRPPPPP

7.44

-3.25

-2.14

P41832

PAPPMMPA

7.85

-4.17

-3.06

GVIPPAPP

8.71

-2.32

-1.21

PPAPPMMP

8.72

-4.22

-3.11

Q12342

KAPPPPPP

8.78

-3.09

-1.98

AKAPPPPP

9.75

-2.13

-1.02

PPPPPPPP

10.19

-2.91

-1.80

P38237

FQIPSKPE

5.09

-3.86

-2.75

PFVPPPNV

9.56

-4.03

-2.92

FVPPPNVP

9.67

-2.30

-1.19

P53094

LKLPPLPL

7.75

-3.53

-2.42

DPVSPKPV

7.80

-3.30

-2.19

CYPLKLPP

9.38

-3.20

-2.09

Q01389

KREAPKPP

7.19

-1.90

-0.79

PPPIPKTA

7.84

-2.35

-1.24

SSPPPIPK

8.37

-2.30

-1.19

P40021

LPPPLFPS

8.01

-4.26

-3.15

PLPPPLFP

8.21

-4.62

-3.51

GPPPPLPP

8.64

-3.79

-2.68

Q04439

PPPSSKPK

8.12

-2.10

-0.99

ANIPPPPP

8.30

-3.72

-2.61

PKEPMFEA

8.31

-2.76

-1.65

Q12446

PPPPPRRG

7.21

-4.65

-3.54

PPPPPMRT

7.41

-4.84

-3.73

PPPPHRHV

7.58

-3.88

-2.77

Q01560

YYPPPPPG

8.61

-3.14

-2.03

PYYPPPPP

9.36

-3.33

-2.22

YPPPPPGE

9.66

-2.72

-1.61

P00950

FDVPPPPI

9.08

-3.35

-2.24

DVPPPPID

9.28

-3.15

-2.04

VPPPPIDA

10.22

-2.79

-1.68

P33334

SKMPTRFP

6.40

-4.90

-3.79

KMPTRFPP

8.09

-3.58

-2.47

PPPPGFEE

8.48

-4.44

-3.33

P40523

LAPPPHGP

8.29

-2.69

-1.58

VGVPPLAP

8.41

-4.65

-3.54

MHNSPRNP

9.62

-2.89

-1.78

Q08989

KGPPPPPP

8.81

-3.06

-1.95

PPPPPPPP

10.19

-2.91

-1.80

GPPPPPPP

10.23

-2.75

-1.64

P37370

QMPKPRPF

7.29

-3.96

-2.85

PPIPGMGA

7.34

-3.81

-2.70

QNRPHMPS

7.43

-3.26

-2.15

P39743

ATIPEDNP

10.00

-2.64

-1.53

 


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