ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_CKB-OOT-23.PDB
Scoring matrix: LSB3_CKB-OOT-23_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 16.91
Foldx random average score for Saccharomyces cerevisiae: 14.829

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2186473
Proteins after random average filtering: 5078
 Total fragments: 1024189
Proteins after disorder filtering: 3358
 Total fragments: 58000
Proteins after pattern filtering: 1390
 Total fragments: 4864
Proteins after MINT filtering: 49
 Total fragments: 257


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

16.91

-2.96

0.00

Best peptides

YRLMRYM

0.00

-4.53

-1.57

         
Interactors      
Q06604

KPLLPTR

10.24

-5.43

-2.46

GPRMPSR

11.24

-3.54

-0.58

LPTRPNK

11.57

-4.17

-1.21

P09119

VPLTPTT

14.49

-3.37

-0.41

P25604

PHLKPPL

10.26

-4.50

-1.54

KSPHLKP

11.81

-3.60

-0.64

KPKSPHL

11.88

-3.28

-0.31

P40325

QPPRPPR

10.13

-3.58

-0.62

RPPRPAA

10.98

-7.03

-4.07

RPHQRPS

11.25

-5.70

-2.74

Q04322

TPSKSPT

12.83

-3.10

-0.14

PLDRPQL

13.14

-2.24

0.72

SPPLPPR

13.45

-2.70

0.26

P38266

YPIEPSL

5.51

-3.48

-0.52

KDPKSFP

11.26

-4.92

-1.96

PPPKPFR

11.46

-3.60

-0.64

P15891

TPEKKPK

11.82

-3.01

-0.04

QPPLPSR

12.39

-4.86

-1.90

TPSKSPA

13.12

-2.39

0.57

P53169

YSPAQPS

8.34

-3.33

-0.37

VPIMPTL

10.62

-5.32

-2.36

MPTLPPR

11.51

-5.38

-2.42

Q12344

SPKLPPR

13.09

-2.45

0.51

SPPLPPR

13.45

-2.70

0.26

TSPKLPP

13.70

-3.77

-0.81

P40494

RPPRPPP

9.74

-6.96

-4.00

PPNMMPV

12.25

-3.69

-0.73

QPPNMMP

12.67

-3.49

-0.53

P53238

QKPAGRP

12.44

-4.09

-1.13

KPAGRPI

12.59

-3.44

-0.48

IPPAPTH

14.20

-3.34

-0.38

P32660

YPPGYDP

8.32

-2.62

0.34

YDPTDPN

10.23

-2.59

0.38

HAPMSPF

11.13

-7.18

-4.21

P38739

SPFHDPI

13.00

-0.37

2.59

Q04749

LPVLPRR

11.86

-5.02

-2.05

NPRKPTL

11.88

-3.97

-1.01

FNPRKPT

12.74

-3.83

-0.87

P38090

SPNDPDL

13.98

0.31

3.27

P47129

LPNRKPN

10.28

-4.84

-1.88

RKPNPPP

10.88

-5.46

-2.50

PPLLPPR

11.97

-4.63

-1.67

P40453

PPDLPIR

13.33

-3.10

-0.14

PVSMPTT

13.57

-3.27

-0.31

MPTTPEI

13.60

-3.56

-0.60

P40095

SPNRPTL

11.34

-2.20

0.76

RSPNRPT

11.59

-6.25

-3.29

PPRSPNR

13.31

-1.22

1.74

Q12168

VPNRPGG

12.71

-2.74

0.22

PPPLPPR

13.93

-2.97

-0.01

PVPKPNI

14.18

-3.11

-0.15

P32793

GPTHPSN

14.60

-1.25

1.71

P36123

RPGNPLY

12.02

-6.22

-3.25

YARPGNP

12.21

-2.80

0.17

QPSDPKL

12.70

-0.63

2.34

Q08412

LPTQPVR

11.75

-4.49

-1.53

LPPEPLD

13.50

-3.95

-0.99

WQPLPPE

13.92

-5.18

-2.21

P32855

APTLPKR

14.28

-3.37

-0.41

NPSSSPN

14.82

-0.93

2.03

Q06409

KPRKTPR

9.25

-4.68

-1.71

KTPRPPF

11.15

-5.06

-2.09

RPPFPFF

12.67

-6.89

-3.92

P32634

YPLNLPI

4.99

-3.85

-0.89

LPNSPIL

10.64

-3.04

-0.08

IPLEPLP

11.93

-4.41

-1.45

P53118

ENPHDLP

14.50

-2.09

0.88

Q12199

QPTAAPA

13.60

-2.94

0.02

NPNNPQC

13.74

-0.76

2.21

P19158

YDPSLPD

8.90

-1.85

1.11

LPDTPTM

12.82

-3.44

-0.48

SPSSPPS

14.31

-0.92

2.04

P43638

HPDAPKL

10.90

-6.41

-3.45

IPPHPDA

13.30

-2.97

-0.01

VPTNIPP

14.26

-4.24

-1.28

P53933

YPGNPTS

9.38

-2.22

0.74

LPMELPH

13.31

-3.79

-0.83

PPPLPNR

14.47

-4.18

-1.21

P32790

PPIKPPR

10.77

-4.25

-1.29

KPPRPTS

12.22

-3.76

-0.79

PPAMPAR

12.43

-3.68

-0.72

P33400

PPNAPSY

13.08

-2.58

0.38

PQILPPL

13.18

-3.28

-0.31

QPPNAPS

13.94

-1.67

1.29

P38238

SPTNPPY

13.94

-2.57

0.40

Q06116

SPELVPR

13.19

-2.19

0.77

EPNSPEL

13.30

-0.79

2.17

KPFYPVT

14.03

-3.26

-0.29

Q08229

YNPTIPP

9.25

-3.42

-0.46

LPSTPNE

13.47

-3.84

-0.88

P38930

FPDMVPK

11.15

-4.42

-1.46

MVPKHPT

13.33

-4.78

-1.82

Q12446

RLPAPPP

11.31

-7.23

-4.27

RGPAPPP

11.33

-6.17

-3.21

LPPASPE

12.57

-5.03

-2.07

P33336

LPSHPSS

11.23

-3.45

-0.49

P40041

IPLSPPS

12.72

-3.51

-0.54

KIPLSPP

13.74

-4.84

-1.88

P50942

HPLKPCD

10.14

-6.89

-3.92

KPEKPPV

10.45

-4.48

-1.52

IVPRPCP

13.15

-4.11

-1.15

P47030

FPPEPSM

12.67

-3.09

-0.13

P40563

PSERPKR

12.03

-2.47

0.49

VTPKVPE

13.86

-3.41

-0.45

TPNVPTR

14.35

-1.93

1.03

P40528

IPITPSH

14.21

-3.50

-0.54

Q12134

HQPVPSP

14.73

-6.77

-3.80

P53901

YNQPPLP

12.36

-3.36

-0.40

QPPLPPI

13.00

-3.41

-0.45

SPKLPPL

13.45

-2.52

0.44

P39743

NPLTSPV

14.40

-3.35

-0.39

P31374

SPERPSF

11.98

-2.38

0.58

QPRLPST

13.07

-2.76

0.21

KKPGTPV

13.56

-2.77

0.19

P38870

TPERPKR

11.04

-2.49

0.47

STPKPPP

13.47

-2.71

0.25

TTPERPK

14.70

-2.69

0.27

P53955

NDPRSPL

13.15

-3.69

-0.73

 


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