ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_CKB-OOT-2.PDB
Scoring matrix: LSB3_CKB-OOT-2_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.63
Foldx random average score for Saccharomyces cerevisiae: 24.532

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171239
Proteins after random average filtering: 5078
 Total fragments: 1049787
Proteins after disorder filtering: 3140
 Total fragments: 73700
Proteins after pattern filtering: 1489
 Total fragments: 8885
Proteins after MINT filtering: 48
 Total fragments: 498


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

23.63

7.11

0.00

Best peptides

RWRRPHRRKR

0.00

2.56

-4.55

         
Interactors      
Q06604

RYSNIPSSKP

17.19

-2.42

-9.53

KGPRMPSRGR

19.25

-2.83

-9.94

YSNIPSSKPA

19.36

-1.00

-8.11

P09119

LTPTTSPVKK

16.93

-0.83

-7.94

P25604

PKPKSPHLKP

18.70

-2.62

-9.73

KPKSPHLKPP

19.68

-2.78

-9.89

QNTPPLPPKP

20.31

-1.29

-8.40

P40325

PRPQQNPSLP

16.64

-6.68

-13.79

SLPWTYPPRF

17.02

0.78

-6.33

LYVQPGDPRL

17.98

-3.12

-10.23

Q04322

GNATPSKSPT

20.12

1.74

-5.37

ATPSKSPTSA

20.66

0.44

-6.67

KNDQAPLDRP

20.79

-0.53

-7.64

P38266

ILPAPGEPLS

17.35

-4.89

-12.00

RNNVEPPPPP

18.24

-1.54

-8.65

VRMQPQPPQP

18.64

-3.49

-10.60

P15891

RRATPEKKPK

17.39

-2.29

-9.40

KTPSPAPAAK

17.64

-2.52

-9.63

FTPSKSPAPV

18.01

-1.11

-8.22

P53169

IMPTLPPRPY

18.43

-2.59

-9.70

TANSVPIMPT

23.47

-0.40

-7.51

NSVPIMPTLP

23.88

-3.33

-10.44

Q12344

VATSTSPKLP

17.75

-2.91

-10.02

ATSTSPKLPP

21.76

-2.21

-9.32

TTSSPPLPPR

21.80

-0.67

-7.78

P40494

DKSRPPRPPP

16.82

-2.33

-9.44

GKDKSRPPRP

17.30

-6.52

-13.63

KSRPPRPPPK

20.50

-2.80

-9.91

P53238

QKPAGRPIPP

17.38

0.63

-6.48

PAGRPIPPAP

20.86

-4.38

-11.49

GRPIPPAPTH

23.04

1.38

-5.73

P32660

HGDGHAPMSP

20.88

-1.81

-8.92

HAPMSPFEDT

21.27

-1.18

-8.29

DHYPPGYDPT

22.91

-2.24

-9.35

P38739

ASPFHDPILP

19.28

-3.01

-10.12

LASPFHDPIL

20.73

-0.78

-7.89

LTAGSPPNDP

21.71

-3.57

-10.68

Q04749

TNPVFNPRKP

15.24

-0.22

-7.33

SNNSPLPVLP

19.96

-3.63

-10.74

PLPVLPRRIS

20.40

-1.53

-8.64

P38090

IVCSPNDPDL

21.66

-0.15

-7.26

VCSPNDPDLT

24.09

-0.80

-7.91

P47129

STPTSGPPLL

16.67

-5.38

-12.49

PNRKPNPPPN

17.36

-1.35

-8.46

NNTLPNRKPN

17.83

-0.30

-7.41

P40453

IRLRKRPPPP

13.75

-5.06

-12.17

RLRKRPPPPP

15.56

-5.69

-12.80

LRKRPPPPPP

17.01

-6.67

-13.78

P40095

VLPPPRSPNR

21.09

1.23

-5.88

SSPTPAPSSG

21.56

-1.38

-8.49

PTPAPSSGSS

22.31

2.14

-4.97

Q12168

TTNRGPPPLP

17.16

-6.11

-13.22

PVPKPNIDDQ

19.49

-2.16

-9.27

NKVQHPVPKP

19.82

-2.98

-10.09

P32793

YSLGHGPTHP

19.22

-5.25

-12.36

GHGPTHPSNM

20.71

0.23

-6.88

HGPTHPSNMS

23.95

-0.74

-7.85

P36123

SYARPGNPLY

13.82

-4.75

-11.86

LFPPDHFPSR

17.42

-1.60

-8.71

SRSQPSDPKL

18.54

-1.97

-9.08

Q08412

KKWQPLPPEP

17.68

-2.47

-9.58

TKKKWQPLPP

17.70

-3.04

-10.15

KWQPLPPEPL

19.91

-3.77

-10.88

P32855

NYSNPSSSPN

19.63

0.27

-6.84

GATNNAPTLP

19.69

-4.87

-11.98

SNPSSSPNSL

20.71

0.32

-6.79

Q06409

KTPRPPFPFF

17.15

-2.64

-9.75

STGKPRKTPR

17.75

-0.68

-7.79

ANSTPRNPDP

19.37

1.87

-5.24

P32634

SASLPNSPIL

18.89

-0.70

-7.81

VLNIPLPPQE

19.82

-1.43

-8.54

CYPLNLPIVP

20.60

-3.04

-10.15

P53118

SVENPHDLPS

21.86

0.09

-7.02

ENPHDLPSHL

22.90

1.33

-5.78

PHDLPSHLGS

22.94

-0.11

-7.22

Q12199

RHICNNPNNP

16.85

-4.54

-11.65

PTAAPATPPR

19.86

-2.22

-9.33

ICNNPNNPQC

19.88

1.03

-6.08

P19158

SSSSPSSPPS

20.97

0.77

-6.34

SMTPVSPLGL

22.23

-0.05

-7.16

QSSMTPVSPL

22.34

-1.15

-8.26

P43638

PTDAPGFDKF

16.30

-1.76

-8.87

AKGRPIPPHP

19.13

-2.40

-9.51

TSVPTNIPPP

21.04

-2.07

-9.18

P53933

RTRRRPPPPP

14.24

-7.70

-14.81

VRTRRRPPPP

14.62

-2.85

-9.96

TRRRPPPPPI

17.35

-3.76

-10.87

P50101

GTVFPGSPID

19.05

-2.88

-9.99

VFPGSPIDKS

19.12

-3.34

-10.45

IGTVFPGSPI

24.08

-1.07

-8.18

P33400

HSTSPQILPP

18.79

-1.68

-8.79

TSPQILPPLP

19.94

-3.45

-10.56

SHSTSPQILP

23.37

-3.76

-10.87

Q06116

KNLHSEPVEP

19.18

-1.67

-8.78

NLHSEPVEPF

22.98

-0.85

-7.96

GNGVKPFYPV

23.52

-3.40

-10.51

Q08229

YLTRPLPSTP

16.99

-3.30

-10.41

TRPLPSTPNE

20.65

2.42

-4.69

ETNDYNPTIP

21.70

-0.40

-7.51

P38930

QAFPDMVPKH

22.73

-0.01

-7.12

Q12446

ATGRRGPAPP

13.80

-9.16

-16.27

TTKHKAPPPP

16.82

-4.72

-11.83

RLPAPPPPPR

16.85

-3.98

-11.09

P32790

VSSAPAPLDP

18.44

-2.97

-10.08

GTTVPAAPVS

21.65

-0.69

-7.80

EGPPPAMPAR

23.91

-1.49

-8.60

P33336

RNLPSHPSSN

18.31

1.00

-6.11

DRNLPSHPSS

22.35

4.08

-3.03

NLPSHPSSNN

23.33

-0.90

-8.01

P40041

PNGRTLPPVP

18.08

-2.28

-9.39

PLSPPSSSNM

22.79

0.17

-6.94

P50942

IVPRPCPPIR

15.20

-6.10

-13.21

STPKPLPPVP

18.59

-1.31

-8.42

KLNVLPPPPP

18.92

-4.93

-12.04

P47030

HNANNPLDKP

20.22

-1.05

-8.16

DTETKPPRAP

23.01

-2.22

-9.33

P40563

PKRRAPPPVP

17.20

-4.72

-11.83

GMVNPGQLPP

18.05

-4.34

-11.45

IKANSEPPTP

19.65

-3.77

-10.88

Q12134

RSTHQPVPSP

21.88

-3.07

-10.18

P53901

PNSHPHPSGL

16.37

-1.99

-9.10

SSPNSHPHPS

17.39

-1.56

-8.67

MAMRPIPPLP

17.57

-6.14

-13.25

P39743

AYSNPLTSPV

22.91

-1.07

-8.18

PNATIPEDNP

24.35

-0.20

-7.31

P31374

RKTKPPPPLD

16.50

-4.13

-11.24

SNKKPGTPVF

17.44

-3.12

-10.23

PLDFEQPRLP

18.29

-3.33

-10.44

P38870

STPKPPPNDK

19.84

-1.03

-8.14

PTTPERPKRK

22.10

0.15

-6.96

TPTTPERPKR

22.80

-0.03

-7.14

P53955

RNPIPYPIDA

15.54

3.23

-3.88

LAQRNPIPYP

19.64

-4.95

-12.06

SNQNDPRSPL

21.76

0.49

-6.62

 


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