ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_CKB-OOT-12.PDB
Scoring matrix: LSB3_CKB-OOT-12_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.82
Foldx random average score for Saccharomyces cerevisiae: 12.821

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 773392
Proteins after disorder filtering: 3065
 Total fragments: 46887
Proteins after pattern filtering: 1440
 Total fragments: 7742
Proteins after MINT filtering: 49
 Total fragments: 525


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

15.82

-1.43

0.00
Best peptides

WRFRRHRK

0.00

-4.15

-2.72
         
Interactors      
Q06604

PRMPSRGR

6.98

-5.88

-4.45

PTRPNKAE

8.82

-4.56

-3.13

GPRMPSRG

9.90

-5.26

-3.83
P09119

MSAIPITP

11.05

-3.38

-1.95
P25604

KPKSPHLK

9.55

-3.77

-2.34

PPPPPQPA

9.63

-4.48

-3.05

PKSPHLKP

9.84

-4.43

-3.00
P40325

QSRPHQRP

4.02

-5.72

-4.29

PPRPQQNP

7.57

-4.24

-2.81

PPRPPRPA

7.69

-5.21

-3.78
Q12532

PFKPYING

9.27

-2.96

-1.53
Q04322

TSPPLPPR

10.71

-4.67

-3.24

STPPTLPP

10.94

-5.48

-4.05

QAPLDRPQ

11.50

-5.16

-3.73
P38266

VRMQPQPP

5.95

-6.38

-4.95

KSFPPPPL

7.55

-4.93

-3.50

PPRPPPSR

8.93

-4.61

-3.18
P15891

PPPPPRRA

10.03

-6.43

-5.00

APPPPPRR

10.66

-5.64

-4.21

PPPPRRAT

10.68

-5.51

-4.08
P53169

PIMPTLPP

9.42

-6.22

-4.79

ANSVPIMP

10.91

-3.33

-1.90

IMPTLPPR

12.06

-3.89

-2.46
Q12344

PLPPRQNV

8.82

-5.35

-3.92

TSPKLPPR

10.35

-4.39

-2.96

STSPKLPP

10.58

-4.69

-3.26
P40494

KSRPPRPP

6.38

-5.30

-3.87

SRPPRPPP

8.66

-6.12

-4.69

SKPTLIPD

9.00

-3.97

-2.54
P53238

AGRPIPPA

8.69

-3.97

-2.54

PAGRPIPP

10.19

-2.80

-1.37

QKPAGRPI

10.20

-6.60

-5.17
P32660

PNRPKVTK

8.10

-4.55

-3.12

DGHAPMSP

10.53

-3.91

-2.48

TDPNRPKV

11.77

-4.59

-3.16
P38739

PFHDPILP

7.84

-3.45

-2.02

SPFHDPIL

9.69

-3.46

-2.03

LASPFHDP

10.37

-2.28

-0.85
Q04749

PVFNPRKP

7.13

-5.89

-4.46

PRKPTLST

9.73

-4.58

-3.15

NPRKPTLS

10.34

-4.16

-2.73
P47129

PNRKPNPP

8.23

-3.44

-2.01

NRKPNPPP

9.59

-4.37

-2.94

RKPNPPPN

10.46

-4.10

-2.67
P40453

RKRPPPPP

6.69

-4.51

-3.08

LRKRPPPP

8.59

-5.10

-3.67

KRPPPPPP

9.29

-4.88

-3.45
P40095

PNRPTLSD

9.14

-3.82

-2.39

PPRSPNRP

9.41

-3.29

-1.86

PRSPNRPT

9.45

-3.30

-1.87
Q12168

PYFPQFRS

6.52

-5.58

-4.15

DPYFPQFR

7.45

-4.30

-2.87

VQHPVPKP

9.66

-5.12

-3.69
P32793

PTHPSNMS

9.38

-3.75

-2.32

GHGPTHPS

11.02

-3.37

-1.94

LGHGPTHP

11.62

-3.68

-2.25
P36123

YARPGNPL

8.68

-3.47

-2.04

LFPPDHFP

8.87

-5.66

-4.23

PKTPPRPK

9.05

-3.82

-2.39
Q08412

NSRPQQPE

5.87

-3.90

-2.47

KKWQPLPP

7.37

-6.90

-5.47

KNSRPQQP

9.85

-1.99

-0.56
P32855

NNAPTLPK

11.80

-4.37

-2.94

APTLPKRK

12.23

-3.87

-2.44

NAPTLPKR

12.44

-4.01

-2.58
Q06409

KPRKTPRP

8.21

-5.19

-3.76

TPRPPFPF

8.65

-3.76

-2.33

PRKTPRPP

8.80

-3.72

-2.29
P32634

VCYPLNLP

9.33

-3.77

-2.34

PVPKAPSR

11.04

-4.37

-2.94

CYPLNLPI

11.22

-4.51

-3.08
P53118

ENPHDLPS

11.39

-4.12

-2.69

NPHDLPSH

12.00

-3.25

-1.82
Q12199

TTPSVQPT

10.33

-3.84

-2.41

PATPPRHI

11.23

-4.24

-2.81

NPNNPQCL

12.31

-2.03

-0.60
P19158

SSMTPVSP

11.29

-3.86

-2.43

GEYDPSLP

11.70

-2.95

-1.52

SSPSSPPS

12.41

-3.50

-2.07
P43638

KGRPIPPH

8.35

-4.15

-2.72

AKGRPIPP

8.83

-2.97

-1.54

SVPTNIPP

10.08

-3.40

-1.97
P53933

TRRRPPPP

5.76

-5.69

-4.26

RRRPPPPP

6.20

-4.42

-2.99

VSYPGNPT

8.87

-4.20

-2.77
P50101

TVFPGSPI

9.77

-3.69

-2.26
P33400

STSPQILP

10.00

-3.28

-1.85

TSPQILPP

11.26

-5.76

-4.33

ILPPLPVG

12.29

-3.78

-2.35
P38238

SLDPVQSP

12.27

-1.68

-0.25

QSPTNPPY

12.57

-3.25

-1.82
Q06116

KPFYPVTS

10.56

-4.23

-2.80

PFYPVTSE

10.79

-3.58

-2.15

GVKPFYPV

11.02

-3.14

-1.71
Q08229

DYNPTIPP

10.05

-2.04

-0.61

NDYNPTIP

11.03

-3.53

-2.10

LPTPVQPG

11.42

-3.66

-2.23
P38930

QAFPDMVP

9.03

-4.85

-3.42

PDMVPKHP

10.64

-5.55

-4.12

DMVPKHPT

11.70

-4.46

-3.03
Q12446

NRPLPQLP

8.14

-4.51

-3.08

PPPPPHRH

8.16

-6.05

-4.62

PRRGPAPP

8.96

-1.86

-0.43
P32790

PAMPARPT

8.87

-6.08

-4.65

PIKPPRPT

9.48

-5.10

-3.67

IKPPRPTS

9.95

-5.67

-4.24
P33336

PSHPSSNN

11.25

-3.01

-1.58

RNLPSHPS

11.49

-5.45

-4.02

NLPSHPSS

12.66

-3.99

-2.56
P40041

GRTLPPVP

12.02

-2.37

-0.94

KIPLSPPS

12.13

-3.56

-2.13
P50942

RPCPPIRR

8.80

-5.26

-3.83

PCPPIRRK

8.86

-6.12

-4.69

STPKPLPP

9.92

-5.82

-4.39
P47030

ETKPPRAP

10.00

-4.36

-2.93

EAFPPEPS

10.01

-2.98

-1.55

AFPPEPSM

12.26

-3.78

-2.35
P40563

PSERPKRR

10.41

-5.23

-3.80

MVNPGQLP

10.70

-2.67

-1.24

RAPPPVPK

10.80

-4.42

-2.99
P40528

PLPYPIAQ

10.41

-3.79

-2.36

PITPSHDN

10.63

-2.81

-1.38
P53901

MAMRPIPP

6.75

-6.91

-5.48

AMRPIPPL

8.55

-5.76

-4.33

SSPNSHPH

8.61

-6.29

-4.86
P31374

PERPSFRQ

6.85

-5.66

-4.23

PVFPNLDP

8.57

-5.65

-4.22

FEQPRLPS

10.26

-4.91

-3.48
P38870

PERPKRKS

6.39

-6.40

-4.97

PKPPPNDK

10.72

-3.28

-1.85

STPKPPPN

10.77

-4.54

-3.11
Q07660

SAFKPIGP

5.83

-6.11

-4.68
P53955

PIPYPIDA

10.85

-3.92

-2.49

QRNPIPYP

11.78

-4.00

-2.57

RNPIPYPI

12.63

-3.28

-1.85

 


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