ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_2A08-23.PDB
Scoring matrix: LSB3_2A08-23_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 11.96
Foldx random average score for Saccharomyces cerevisiae: 10.560

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2186473
Proteins after random average filtering: 5078
 Total fragments: 1195860
Proteins after disorder filtering: 3411
 Total fragments: 65205
Proteins after pattern filtering: 1533
 Total fragments: 6827
Proteins after MINT filtering: 49
 Total fragments: 348


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

11.96

-1.59

0.00
Best peptides

YPLIPMR

0.00

-6.08

-4.49
         
Interactors      
Q06604

KPLLPTR

4.85

-5.71

-4.12

GPRMPSR

7.81

-2.26

-0.67

PPPLPTR

7.82

-4.26

-2.67
P09119

VPLTPTT

8.36

-1.54

0.05

QVPLTPT

9.13

-3.36

-1.77

LTPTTSP

9.65

-2.24

-0.65
P25604

PHLKPPL

5.79

-5.17

-3.58

KPPLPPP

6.51

-5.07

-3.48

LPPKPNT

7.67

-4.63

-3.04
P40325

RPPRPAA

6.21

-5.23

-3.64

QPPRPPR

6.37

-4.36

-2.77

SRPHQRP

7.80

-1.93

-0.34
Q04322

SPPLPPR

7.53

-4.00

-2.41

PPTLPPR

7.64

-4.13

-2.54

QAPLDRP

7.68

-3.93

-2.34
P38266

YPIEPSL

5.30

-5.91

-4.32

PPPKPFR

6.29

-3.96

-2.37

PPLKPGQ

6.44

-4.95

-3.36
P15891

QPPLPSR

7.12

-5.28

-3.69

FTPSKSP

8.16

-4.31

-2.72

PEKKPKE

8.51

-3.69

-2.10
P53169

MPTLPPR

6.00

-5.39

-3.80

YSPAQPS

7.50

-5.18

-3.59

VPIMPTL

8.36

-4.09

-2.50
Q12344

SPKLPPR

7.41

-3.14

-1.55

SPPLPPR

7.53

-4.00

-2.41

TSPKLPP

8.21

-3.24

-1.65
P40494

RPPRPPP

4.98

-7.16

-5.57

PTLIPDN

6.54

-5.41

-3.82

KPTLIPD

8.14

-4.64

-3.05
P53238

GRPIPPA

7.88

-3.82

-2.23

KPAGRPI

8.14

-2.74

-1.15

PAGRPIP

8.41

-4.30

-2.71
P32660

YPPGYDP

5.82

-4.46

-2.87

YDPTDPN

7.20

-2.70

-1.11

HAPMSPF

7.98

-3.04

-1.45
P38739

HDPILPR

6.29

-3.48

-1.89

SPFHDPI

8.67

-1.18

0.41
Q04749

LPVLPRR

6.01

-4.93

-3.34

FNPRKPT

6.14

-5.95

-4.36

NPRKPTL

7.86

-2.95

-1.36
P47129

PPLLPPR

5.14

-5.27

-3.68

RKPNPPP

7.33

-4.58

-2.99

LPNRKPN

8.06

-3.60

-2.01
P40453

TPEIPPP

7.04

-4.15

-2.56

PPDLPIR

7.71

-3.59

-2.00

MPTTPEI

8.29

-2.43

-0.84
P40095

IPVLPPP

7.10

-4.91

-3.32

RSPNRPT

8.23

-3.50

-1.91

PPPRSPN

8.38

-3.79

-2.20
Q12168

PPPLPPR

7.11

-4.53

-2.94

PVPKPNI

8.68

-3.39

-1.80

VPNRPGG

9.41

-2.61

-1.02
P32793

GPTHPSN

9.42

-0.59

1.00

HGPTHPS

10.04

-0.49

1.10
P36123

FPPDHFP

7.21

-2.96

-1.37

TPKTPPR

8.24

-0.78

0.81

RPGNPLY

8.25

-4.38

-2.79
Q08412

WQPLPPE

7.49

-4.88

-3.29

PPQLPTR

8.45

-3.43

-1.84

LPPEPLD

8.53

-2.90

-1.31
P32855

APTLPKR

8.57

-3.31

-1.72
Q06409

KPRKTPR

6.32

-3.98

-2.39

KTPRPPF

6.97

-4.20

-2.61

RPPFPFF

7.13

-4.02

-2.43
P32634

YPLNLPI

4.34

-5.24

-3.65

IPLEPLP

5.92

-3.16

-1.57

KIPLEPL

7.51

-4.43

-2.84
P53118

ENPHDLP

8.75

-1.77

-0.18

PHDLPSH

9.94

-4.91

-3.32
Q12199

APATPPR

9.34

-1.50

0.09

AAPATPP

10.20

-2.56

-0.97

QPTAAPA

10.24

-1.99

-0.40
P19158

YDPSLPD

7.55

-4.05

-2.46

DPSLPDT

10.02

-2.74

-1.15

MTPVSPL

10.39

-4.74

-3.15
P43638

IPPHPDA

7.78

-2.32

-0.73

PTNIPPP

7.92

-4.82

-3.23

GRPIPPH

8.01

-3.30

-1.71
P53933

PPPIPST

7.45

-4.42

-2.83

PPPLPNR

7.61

-3.80

-2.21

LPMELPH

8.04

-3.96

-2.37
P50101

FPGSPID

8.36

-3.26

-1.67

VFPGSPI

9.69

-1.11

0.48
P33400

SPQILPP

7.95

-3.86

-2.27

PQILPPL

8.24

-4.78

-3.19

LPPLPVG

8.57

-5.20

-3.61
P38238

QSPTNPP

9.68

-1.52

0.07

SPTNPPY

10.26

-0.38

1.21
Q06116

SPELVPR

8.49

-2.87

-1.28

EPVEPFS

9.11

-1.09

0.50

PELVPRS

9.38

-4.28

-2.69
Q08229

NPTIPPR

6.50

-3.43

-1.84

YNPTIPP

6.54

-4.26

-2.67

LPSTPNE

9.56

-1.93

-0.34
P38930

MVPKHPT

7.32

-4.79

-3.20

FPDMVPK

7.56

-4.99

-3.40
Q12446

FAPLPDP

5.88

-6.32

-4.73

RLPAPPP

7.14

-5.16

-3.57

RGPAPPP

7.29

-5.84

-4.25
P32790

LPPIKPP

6.00

-5.94

-4.35

PPIKPPR

6.70

-4.42

-2.83

MPARPTA

7.57

-4.84

-3.25
P33336

LPSHPSS

8.27

-2.35

-0.76

CDPEDYP

8.95

-2.53

-0.94

RNLPSHP

10.27

-5.19

-3.60
P40041

KIPLSPP

7.67

-5.70

-4.11

IPLSPPS

7.72

-2.07

-0.48
P50942

HPLKPCD

5.71

-3.96

-2.37

KPEKPPV

7.33

-3.44

-1.85

IVPRPCP

7.53

-3.97

-2.38
P47030

FPPEPSM

7.17

-4.58

-2.99

NNPLDKP

9.28

-4.35

-2.76
P40563

PSERPKR

8.28

-2.59

-1.00

PVPKKPS

9.07

-3.66

-2.07

VTPKVPE

9.19

-2.50

-0.91
P40528

IPITPSH

9.21

-2.72

-1.13

DIPITPS

9.65

-2.63

-1.04
Q12134

PVPSPMN

10.28

-2.22

-0.63
P53901

MRPIPPL

5.03

-5.63

-4.04

LPPIPTR

6.10

-4.83

-3.24

NDPIILP

7.33

-4.50

-2.91
P39743

NPLTSPV

7.70

-2.63

-1.04

SNPLTSP

9.56

-3.89

-2.30

TIPEDNP

10.23

-1.72

-0.13
P31374

FPNLDPT

6.81

-5.58

-3.99

QPRLPST

8.16

-3.87

-2.28

SPERPSF

8.45

-2.82

-1.23
P38870

TPERPKR

7.74

-2.23

-0.64

STPKPPP

8.42

-3.36

-1.77

TPTTPER

9.32

-0.20

1.39
P53955

RNPIPYP

4.93

-7.43

-5.84

NDPRSPL

7.88

-3.51

-1.92

 


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