ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_2A08-21.PDB
Scoring matrix: LSB3_2A08-21_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 17.48
Foldx random average score for Saccharomyces cerevisiae: 16.188

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171239
Proteins after random average filtering: 5078
 Total fragments: 1281209
Proteins after disorder filtering: 3035
 Total fragments: 47324
Proteins after pattern filtering: 1227
 Total fragments: 3264
Proteins after MINT filtering: 45
 Total fragments: 179


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

17.48

-1.04

0.00

Best peptides

EWIRGRPRRR

0.00

-3.38

-2.34

         
Interactors      
Q06604

EKGPRMPSRG

9.34

-6.69

-5.65

PLLPTRPNKA

11.22

-4.24

-3.20

SPPPLPTRRD

12.19

-4.74

-3.70

P09119

LTPTTSPVKK

13.84

-4.69

-3.65

AQVPLTPTTS

14.28

-3.20

-2.16

TPTTSPVKKS

16.13

-4.51

-3.47

P25604

PPKPKSPHLK

10.96

-6.46

-5.42

SLPPKPNTQL

12.82

-3.61

-2.57

PPKPNTQLQQ

14.28

-4.18

-3.14

P40325

YVQPGDPRLG

11.12

-6.16

-5.12

LPWTYPPRFY

11.45

-5.43

-4.39

SRPHQRPSTM

14.80

-2.95

-1.91

Q04322

TPPTLPPRRI

11.54

-6.80

-5.76

ATPSKSPTSA

15.97

-1.56

-0.52

TSPPLPPRAD

16.13

-3.40

-2.36

P38266

PLKPGQKTYT

9.40

-4.51

-3.47

KKPPVVPKKK

10.30

-7.21

-6.17

QPPPKPFRRS

10.58

-5.49

-4.45

P15891

DEPEGEPDVK

13.86

-1.53

-0.49

TPSPAPAAKI

14.58

-4.13

-3.09

AQPPLPSRNV

14.61

-4.87

-3.83

P38870

PTTPERPKRK

9.58

-8.15

-7.11

TTPERPKRKS

13.75

-6.24

-5.20

Q12344

SSPPLPPRQN

13.76

-4.76

-3.72

PLPPRQNVAT

14.63

-4.51

-3.47

PKLPPRGKQR

15.02

-4.66

-3.62

P40494

PPNMMPVTHV

15.02

-5.41

-4.37

QPPNMMPVTH

16.00

-3.63

-2.59

P53238

PIPPAPTHYN

13.31

-4.08

-3.04

P32660

PMSPFEDTFQ

9.81

-4.75

-3.71

PTDPNRPKVT

11.96

-4.29

-3.25

P38739

SPPNDPSTLA

15.50

-5.03

-3.99

Q04749

SPLPVLPRRI

8.96

-6.95

-5.91

VFNPRKPTLS

10.70

-5.01

-3.97

PRKPTLSTDS

13.91

-2.88

-1.84

P38090

VCSPNDPDLT

14.81

-2.69

-1.65

PNDPDLTAAI

15.85

-2.98

-1.94

P47129

GPPLLPPRNT

12.81

-5.77

-4.73

PLLPPRNTMK

14.45

-4.96

-3.92

P40453

PDLPIRLRKR

8.58

-5.58

-4.54

WKPPDLPIRL

10.44

-6.97

-5.93

TKVPEPPSWK

11.76

-4.05

-3.01

P40095

PRSPNRPTLS

10.29

-5.46

-4.42

Q12168

PNRPGGTTNR

9.15

-3.94

-2.90

NDDPYFPQFR

9.84

-4.83

-3.79

PPVPNRPGGT

14.30

-2.59

-1.55

P32793

GHGPTHPSNM

15.18

-2.74

-1.70

HGPTHPSNMS

15.86

-3.65

-2.61

P36123

YARPGNPLYT

11.73

-4.78

-3.74

FPPDHFPSRS

12.89

-4.69

-3.65

RSQPSDPKLQ

13.03

-5.89

-4.85

Q08412

DVPPQLPTRT

9.49

-6.52

-5.48

IELPTQPVRK

9.72

-7.12

-6.08

ELPTQPVRKN

12.02

-5.54

-4.50

P32855

NNAPTLPKRK

10.21

-7.05

-6.01

Q06409

PRNPDPYGFE

13.89

-4.02

-2.98

NNFPTVPVVE

14.08

-3.67

-2.63

P32634

ETVPTEPTRY

8.66

-4.80

-3.76

PTEPTRYNYQ

13.24

-3.31

-2.27

VPDSGPVSRQ

13.68

-3.66

-2.62

P53118

ENPHDLPSHL

15.76

-2.84

-1.80

Q12199

PNNPQCLHCG

14.08

-4.81

-3.77

CNNPNNPQCL

14.11

-3.68

-2.64

AAPATPPRHI

15.25

-4.51

-3.47

P19158

PSLPDTPTMS

11.98

-4.53

-3.49

SMTPVSPLGL

14.65

-4.14

-3.10

P43638

DAPKLPSAFR

14.09

-5.02

-3.98

IPPTDAPGFD

15.93

-2.99

-1.95

P53933

VSYPGNPTSR

9.46

-4.02

-2.98

PPPPIPSTQK

13.59

-4.79

-3.75

APPPLPNRQL

14.11

-4.83

-3.79

P50101

TVFPGSPIDK

14.37

-3.47

-2.43

P33400

VQPPNAPSYQ

14.32

-3.85

-2.81

PNAPSYQSVQ

14.61

-4.36

-3.32

PTGPSLTEHL

16.08

-2.42

-1.38

Q06116

PFYPVTSEFS

13.24

-2.92

-1.88

NSPELVPRSS

14.70

-4.59

-3.55

VKPFYPVTSE

15.47

-3.57

-2.53

Q08229

PSTPNEDSRV

13.17

-4.40

-3.36

PVQPGGHYKN

13.17

-4.09

-3.05

YNPTIPPRSK

14.42

-3.87

-2.83

Q12446

RPLPQLPNRN

10.03

-5.23

-4.19

ALPPASPEVR

11.89

-4.42

-3.38

PPPPTAETFD

13.10

-4.09

-3.05

P32790

APAPLDPFKT

13.27

-4.13

-3.09

PPRPTSTTSV

13.77

-3.32

-2.28

IKPPRPTSTT

14.90

-3.75

-2.71

P33336

RNLPSHPSSN

14.64

-3.26

-2.22

PSHPSSNNMS

15.21

-4.41

-3.37

P40041

KIPLSPPSSS

15.89

-2.74

-1.70

P50942

VPRPCPPIRR

9.38

-5.67

-4.63

PPPPTSRHNK

13.36

-4.94

-3.90

PCPPIRRKSS

15.77

-3.95

-2.91

P47030

AFPPEPSMSS

15.24

-4.15

-3.11

P40563

NSQPQGPSDT

15.17

-2.53

-1.49

P40528

DIPITPSHDN

15.42

-3.33

-2.29

NDIPITPSHD

16.10

-2.44

-1.40

Q12134

QPVPSPMNSQ

15.54

-2.32

-1.28

P53901

DPIILPPTFS

11.00

-5.54

-4.50

KLPPLPTTSN

13.70

-4.11

-3.07

PPIPTRDDMS

14.22

-2.66

-1.62

P31374

NISPERPSFR

7.99

-5.32

-4.28

VFPNLDPTHS

12.61

-3.81

-2.77

EQPRLPSTAS

13.99

-4.62

-3.58

 


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