ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_2A08-20.PDB
Scoring matrix: LSB3_2A08-20_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.56
Foldx random average score for Saccharomyces cerevisiae: 18.861

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2176317
Proteins after random average filtering: 5078
 Total fragments: 1051645
Proteins after disorder filtering: 3194
 Total fragments: 69787
Proteins after pattern filtering: 1492
 Total fragments: 7158
Proteins after MINT filtering: 49
 Total fragments: 402


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

18.56

-2.88

0.00

Best peptides

RPFKKGRRR

0.00

-9.87

-6.99

         
Interactors      
Q06604

PPSPPAKRI

9.68

-11.33

-8.45

PLLPTRPNK

12.05

-7.61

-4.73

PRMPSRGRP

13.01

-7.88

-5.00

P09119

LTPTTSPVK

18.74

-4.76

-1.88

P25604

PPKPKSPHL

13.84

-7.42

-4.54

LPPKPNTQL

14.34

-8.24

-5.36

PPPQPASNA

14.54

-5.57

-2.69

P40325

RPPRPAANL

9.91

-7.36

-4.48

YVQPGDPRL

10.96

-9.03

-6.15

HQSRPHQRP

13.59

-10.00

-7.12

Q04322

NDQAPLDRP

13.47

-7.83

-4.95

STPPTLPPR

15.99

-6.34

-3.46

DQAPLDRPQ

16.61

-5.45

-2.57

P38266

PPPKPFRRS

9.94

-10.03

-7.15

LPPPPTHRD

10.27

-10.43

-7.55

FLPPPKPFR

10.75

-9.59

-6.71

P15891

PPPPPRRAT

13.82

-8.04

-5.16

RATPEKKPK

13.90

-5.88

-3.00

ATPEKKPKE

15.43

-5.07

-2.19

P53169

PIMPTLPPR

15.94

-7.39

-4.51

SPAQPSASL

16.87

-5.04

-2.16

NSVPIMPTL

17.04

-5.11

-2.23

Q12344

PPLPPRQNV

11.87

-8.37

-5.49

PKLPPRGKQ

14.91

-7.13

-4.25

STSPKLPPR

15.40

-7.03

-4.15

P40494

PRPPPKPLH

15.61

-6.68

-3.80

NQPPNMMPV

16.19

-5.87

-2.99

KSRPPRPPP

17.81

-9.84

-6.96

P53238

PPAPTHYNN

13.55

-6.52

-3.64

RPIPPAPTH

13.87

-7.44

-4.56

IPPAPTHYN

16.46

-6.80

-3.92

P32660

GYDPTDPNR

12.36

-5.57

-2.69

PTDPNRPKV

14.48

-6.60

-3.72

DPNRPKVTK

17.06

-6.21

-3.33

P38739

PPNDPSTLA

18.14

-3.65

-0.77

LASPFHDPI

18.31

-5.60

-2.72

TTTSPSTAP

18.39

-4.14

-1.26

Q04749

SPLPVLPRR

9.02

-10.38

-7.50

NPRKPTLST

15.47

-5.41

-2.53

PVLPRRIST

15.84

-5.56

-2.68

P38090

VCSPNDPDL

17.50

-4.05

-1.17

PNDPDLTAA

18.77

-4.27

-1.39

P47129

TLPNRKPNP

14.14

-7.02

-4.14

NTLPNRKPN

14.82

-6.31

-3.43

PLLPPRNTM

15.79

-8.15

-5.27

P40453

PDLPIRLRK

8.61

-7.63

-4.75

WKPPDLPIR

14.39

-6.63

-3.75

VPEPPSWKP

15.06

-8.83

-5.95

P40095

LPPPRSPNR

7.61

-10.32

-7.44

PRSPNRPTL

15.65

-5.73

-2.85

FPDSPSSSS

15.69

-4.17

-1.29

Q12168

PPLPPRANV

12.02

-8.02

-5.14

RGPPPLPPR

13.33

-7.07

-4.19

DPYFPQFRS

13.72

-7.87

-4.99

P32793

GPTHPSNMS

18.00

-4.31

-1.43

P36123

FPPDHFPSR

13.00

-5.84

-2.96

RSQPSDPKL

13.96

-5.97

-3.09

YTTPKTPPR

14.53

-7.17

-4.29

Q08412

DVPPQLPTR

14.88

-6.61

-3.73

LPTQPVRKN

15.89

-7.47

-4.59

IELPTQPVR

15.94

-7.26

-4.38

P32855

NNAPTLPKR

13.49

-6.62

-3.74

SNPSSSPNS

16.44

-2.28

0.60

Q06409

GKPRKTPRP

13.77

-8.88

-6.00

TPRPPFPFF

14.28

-7.11

-4.23

TGKPRKTPR

15.54

-7.08

-4.20

P32634

PTEPTRYNY

12.13

-6.57

-3.69

PPVPKAPSR

13.51

-6.86

-3.98

IPLPPQEKI

14.06

-8.80

-5.92

P53118

VENPHDLPS

17.62

-3.44

-0.56

Q12199

NPNNPQCLH

15.72

-5.10

-2.22

TAAPATPPR

17.18

-6.06

-3.18

PATPPRHIC

17.97

-5.43

-2.55

P19158

PVSPLGLDT

16.44

-2.55

0.33

TPVSPLGLD

16.85

-4.14

-1.26

SMTPVSPLG

17.73

-4.81

-1.93

P43638

PKLPSAFRK

11.77

-8.72

-5.84

PPHPDAPKL

14.12

-7.29

-4.41

RPIPPHPDA

15.13

-5.27

-2.39

P53933

VAPPPLPNR

11.23

-7.59

-4.71

PPLPNRQLP

15.10

-8.09

-5.21

NDLPMELPH

15.85

-4.17

-1.29

P50101

PGSPIDKSI

17.22

-4.66

-1.78

FPGSPIDKS

17.84

-4.37

-1.49

P33400

VQPPNAPSY

16.19

-4.72

-1.84

PPNAPSYQS

17.22

-4.42

-1.54

HSTSPQILP

17.89

-3.08

-0.20

P38238

VQSPTNPPY

18.57

-5.46

-2.58

Q06116

NSPELVPRS

14.62

-5.87

-2.99

HSEPVEPFS

17.30

-2.93

-0.05

NGVKPFYPV

17.43

-3.86

-0.98

Q08229

RPLPSTPNE

11.47

-5.84

-2.96

TPVQPGGHY

13.72

-6.84

-3.96

PVQPGGHYK

14.17

-5.90

-3.02

P38930

QAFPDMVPK

17.28

-5.33

-2.45

Q12446

RPLPQLPNR

7.06

-8.17

-5.29

PQLPNRNNR

9.61

-7.91

-5.03

PPASPEVRK

11.25

-8.95

-6.07

P32790

APAPLDPFK

14.10

-6.76

-3.88

GPPPAMPAR

14.31

-6.99

-4.11

PIKPPRPTS

17.27

-5.93

-3.05

P33336

LPSHPSSNN

13.92

-6.58

-3.70

PSHPSSNNM

14.30

-4.74

-1.86

RNLPSHPSS

17.14

-4.78

-1.90

P40041

PLSPPSSSN

18.12

-6.02

-3.14

P50942

RPCPPIRRK

8.19

-12.44

-9.56

PPPPPTSRH

11.66

-9.79

-6.91

PCPPIRRKS

14.07

-5.68

-2.80

P47030

FPPEPSMSS

14.43

-4.38

-1.50

EAFPPEPSM

16.56

-5.98

-3.10

P40563

PSERPKRRA

12.38

-8.29

-5.41

RAPPPVPKK

14.69

-7.12

-4.24

NSQPQGPSD

16.54

-2.84

0.04

P40528

NDIPITPSH

15.78

-4.04

-1.16

PITPSHDNN

16.73

-4.75

-1.87

Q12134

PVPSPMNSQ

16.78

-3.77

-0.89

P53901

RPIPPLPTE

14.40

-6.92

-4.04

PPLPTTSNS

14.99

-5.24

-2.36

LNSPKLPPL

16.52

-6.17

-3.29

P31374

SPERPSFRQ

10.59

-10.00

-7.12

PPSPDQENH

12.76

-7.04

-4.16

NISPERPSF

14.72

-6.81

-3.93

P38870

PTTPERPKR

12.70

-8.52

-5.64

TPERPKRKS

13.98

-8.88

-6.00

TTPERPKRK

16.66

-8.80

-5.92

P53955

NQNDPRSPL

17.73

-4.72

-1.84

 


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