ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_2A08-13.PDB
Scoring matrix: LSB3_2A08-13_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 18.74
Foldx random average score for Saccharomyces cerevisiae: 17.106

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 1483737
Proteins after disorder filtering: 3369
 Total fragments: 100565
Proteins after pattern filtering: 1635
 Total fragments: 14144
Proteins after MINT filtering: 51
 Total fragments: 856


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

18.74

-0.12

0.00

Best peptides

RPYRNPRR

0.00

-8.89

-8.77

         
Interactors      
Q06604

KPLLPTRP

6.38

-7.53

-7.41

PPPLPTRR

6.88

-8.79

-8.67

GPRMPSRG

7.46

-8.11

-7.99

P09119

MSAIPITP

12.17

-4.19

-4.07

PTTSPVKK

14.41

-3.05

-2.93

TPTTSPVK

14.78

-4.75

-4.63

P25604

TPPLPPKP

10.23

-8.64

-8.52

APSLPPKP

10.67

-6.42

-6.30

LPPKPKSP

11.52

-6.21

-6.09

P40325

QPPRPPRP

5.94

-10.10

-9.98

QPRPPPRP

7.87

-8.92

-8.80

RPQQNPSL

8.88

-4.45

-4.33

Q04322

PPTLPPRR

6.78

-9.52

-9.40

SPPLPPRA

7.30

-10.05

-9.93

PTLPPRRI

11.42

-6.05

-5.93

P38266

PPPKPFRR

6.06

-9.42

-9.30

PPPKPFRH

6.49

-9.66

-9.54

VPILPPRN

7.34

-9.20

-9.08

P15891

APPPPPRR

7.39

-8.45

-8.33

QPPLPSRN

7.75

-9.57

-9.45

PPPPPRRA

8.84

-8.14

-8.02

P53169

MPTLPPRP

4.81

-10.94

-10.82

VPIMPTLP

12.56

-7.43

-7.31

ANSVPIMP

13.43

-4.55

-4.43

Q12344

SPPLPPRQ

7.04

-8.82

-8.70

SPKLPPRG

7.42

-9.07

-8.95

TSPKLPPR

14.34

-3.27

-3.15

P40494

DKSRPPRP

7.52

-8.20

-8.08

RPPRPPPK

8.45

-6.24

-6.12

PPRPPPKP

11.32

-5.96

-5.84

P53238

KPAGRPIP

11.35

-6.68

-6.56

RPIPPAPT

11.90

-3.48

-3.36

IPPAPTHY

13.19

-6.06

-5.94

P32660

DPTDPNRP

8.37

-5.88

-5.76

TDPNRPKV

11.58

-6.99

-6.87

DPNRPKVT

12.51

-6.02

-5.90

P38739

SPFHDPIL

12.17

-3.47

-3.35

SPPNDPST

14.25

-2.26

-2.14

PFHDPILP

14.30

-3.43

-3.31

Q04749

NPVFNPRK

5.33

-7.58

-7.46

LPVLPRRI

6.69

-9.83

-9.71

PLPVLPRR

7.66

-8.93

-8.81

P38090

SPNDPDLT

15.07

-3.95

-3.83

VCSPNDPD

16.29

-1.28

-1.16

P47129

PPLLPPRN

7.60

-9.00

-8.88

PNPPPNRS

10.75

-6.67

-6.55

RKPNPPPN

11.50

-2.79

-2.67

P40453

PPDLPIRL

7.88

-8.40

-8.28

KPPDLPIR

10.33

-4.93

-4.81

PPPLPPKI

10.52

-6.51

-6.39

P40095

PPRSPNRP

8.79

-7.20

-7.08

PVLPPPRS

10.33

-6.96

-6.84

RSPNRPTL

11.35

-4.13

-4.01

Q12168

PPPLPPRA

7.34

-8.92

-8.80

PPPVPNRP

7.66

-9.26

-9.14

PYFPQFRS

9.66

-6.35

-6.23

P32793

GPTHPSNM

14.15

-3.46

-3.34

LGHGPTHP

17.02

-3.45

-3.33

P36123

TPKTPPRP

8.18

-6.63

-6.51

RPGNPLYT

8.76

-4.33

-4.21

PDHFPSRS

9.80

-5.76

-5.64

Q08412

LPTQPVRK

6.49

-8.50

-8.38

PPQLPTRT

8.29

-8.82

-8.70

ELPTQPVR

12.26

-5.06

-4.94

P32855

APTLPKRK

7.45

-9.36

-9.24

NAPTLPKR

13.64

-4.25

-4.13

NPSSSPNS

15.81

-1.46

-1.34

Q06409

KPRKTPRP

6.57

-9.70

-9.58

KTPRPPFP

11.64

-4.64

-4.52

FPTVPVVE

11.95

-5.78

-5.66

P32634

VPTEPTRY

8.68

-7.99

-7.87

YPLNLPIV

11.77

-4.90

-4.78

LEPLPPVP

11.95

-6.06

-5.94

P53118

NPHDLPSH

13.84

-2.01

-1.89

PHDLPSHL

16.07

-4.13

-4.01

ENPHDLPS

16.44

0.60

0.72

Q12199

APATPPRH

8.44

-7.93

-7.81

NNPNNPQC

12.35

-2.01

-1.89

TPSVQPTA

13.48

-4.92

-4.80

P19158

LPDTPTMS

12.26

-5.79

-5.67

DPSLPDTP

13.72

-5.21

-5.09

GEYDPSLP

14.81

-4.00

-3.88

P43638

RPIPPHPD

12.16

-3.02

-2.90

IPPHPDAP

12.81

-5.27

-5.15

APKLPSAF

13.49

-4.46

-4.34

P53933

PPPLPNRQ

7.78

-8.85

-8.73

RPPPPPIP

8.49

-6.22

-6.10

RRRPPPPP

12.04

-3.49

-3.37

P50101

FPGSPIDK

14.77

-3.22

-3.10

VFPGSPID

15.66

-3.41

-3.29

P33400

LPPLPVGI

12.86

-5.67

-5.55

ILPPLPVG

12.93

-3.50

-3.38

PPNAPSYQ

13.38

-3.72

-3.60

P38238

SPTNPPYK

10.77

-4.81

-4.69

LDPVQSPT

13.63

-3.93

-3.81

QSPTNPPY

14.28

-2.59

-2.47

Q06116

SPELVPRS

11.43

-7.62

-7.50

NGVKPFYP

12.92

-3.60

-3.48

KPFYPVTS

13.06

-4.12

-4.00

Q08229

NPTIPPRS

6.64

-8.31

-8.19

NDYNPTIP

11.58

-3.56

-3.44

RPLPSTPN

13.75

-1.77

-1.65

P38930

FPDMVPKH

13.07

-7.68

-7.56

PDMVPKHP

14.46

-5.95

-5.83

AFPDMVPK

15.26

-1.74

-1.62

Q12446

LPQLPNRN

7.25

-8.87

-8.75

APPPPPRR

7.39

-8.45

-8.33

APPPPPRA

8.33

-7.20

-7.08

P32790

PPIKPPRP

6.45

-9.24

-9.12

PPAMPARP

7.30

-9.89

-9.77

KPPRPTST

11.60

-5.32

-5.20

P33336

LPSHPSSN

13.64

-4.31

-4.19

TCDPEDYP

15.31

-2.22

-2.10

DRNLPSHP

15.55

-4.13

-4.01

P40041

GRTLPPVP

13.31

-5.13

-5.01

IPLSPPSS

13.58

-4.62

-4.50

KIPLSPPS

15.12

-3.89

-3.77

P50942

RPCPPIRR

5.50

-9.50

-9.38

KPEKPPVV

10.02

-7.27

-7.15

PPPPTSRH

10.03

-7.85

-7.73

P47030

FPPEPSMS

11.80

-6.04

-5.92

AFPPEPSM

15.09

-1.91

-1.79

ANNPLDKP

15.56

-2.82

-2.70

P40563

TPKVPERP

7.64

-8.84

-8.72

PSERPKRR

7.87

-7.56

-7.44

PPPVPKKP

10.86

-6.05

-5.93

P40528

LNDIPITP

13.44

-3.80

-3.68

IPITPSHD

14.09

-5.74

-5.62

PLPYPIAQ

14.68

-3.46

-3.34

Q12134

QPVPSPMN

14.41

-3.98

-3.86

HQPVPSPM

15.41

-2.09

-1.97

PVPSPMNS

16.10

-2.37

-2.25

P53901

LPPIPTRD

6.29

-8.95

-8.83

QPPLPPIP

10.78

-7.15

-7.03

MRPIPPLP

10.96

-6.85

-6.73

P39743

NPLTSPVA

14.98

-4.02

-3.90

YSNPLTSP

17.09

-2.14

-2.02

P31374

NNISPERP

10.12

-5.98

-5.86

RKTKPPPP

10.51

-5.87

-5.75

SPERPSFR

10.64

-6.33

-6.21

P38870

TPERPKRK

6.27

-10.08

-9.96

TPTTPERP

9.17

-7.58

-7.46

TTPERPKR

12.97

-4.51

-4.39

Q07660

SAFKPIGP

15.31

-3.95

-3.83

P53955

RNPIPYPI

11.48

-3.17

-3.05

QRNPIPYP

15.30

-1.04

-0.92

NQNDPRSP

16.10

-2.99

-2.87

 


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