ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-8.PDB
Scoring matrix: LSB3_1SSH-8_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.36
Foldx random average score for Saccharomyces cerevisiae: 11.779

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 1304975
Proteins after disorder filtering: 3306
 Total fragments: 89302
Proteins after pattern filtering: 1612
 Total fragments: 13876
Proteins after MINT filtering: 52
 Total fragments: 880


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

14.36

-2.61

0.00
Best peptides

DWPYLDPR

0.00

-6.92

-4.31
         
Interactors      
Q06604

SPPPLPTR

3.37

-12.83

-10.22

EKPLLPTR

4.12

-10.00

-7.39

KGPRMPSR

4.39

-9.68

-7.07
P09119

AQVPLTPT

7.90

-7.55

-4.94

TPTTSPVK

8.01

-7.87

-5.26

PTTSPVKK

9.94

-6.47

-3.86
P25604

QAPSLPPK

4.96

-9.02

-6.41

SPHLKPPL

5.20

-9.15

-6.54

LKPPLPPP

5.20

-8.10

-5.49
P40325

SQPPRPPR

3.51

-9.57

-6.96

PWTYPPRF

4.37

-9.87

-7.26

SQPRPPPR

4.96

-10.19

-7.58
Q12532

PFKPYING

11.76

-6.14

-3.53
Q04322

TPPTLPPR

3.75

-12.99

-10.38

TSPPLPPR

4.58

-10.45

-7.84

APLDRPQL

5.92

-9.41

-6.80
P38266

MPPPKPFR

3.30

-10.45

-7.84

QPPPKPFR

3.30

-9.87

-7.26

LPPPKPFR

3.33

-11.35

-8.74
P15891

AQPPLPSR

3.59

-12.53

-9.92

APPPPPRR

4.77

-11.99

-9.38

AAPPPPPR

5.23

-11.81

-9.20
P53169

IMPTLPPR

4.28

-11.98

-9.37

SVPIMPTL

7.98

-6.78

-4.17

NSVPIMPT

8.86

-7.30

-4.69
Q12344

SSPPLPPR

4.55

-12.19

-9.58

TSPKLPPR

4.99

-11.02

-8.41

SPPLPPRQ

7.59

-6.71

-4.10
P40494

RPPPKPLH

4.67

-8.91

-6.30

RPPRPPPK

4.71

-8.72

-6.11

SRPPRPPP

5.63

-8.39

-5.78
P53238

IPPAPTHY

7.96

-5.32

-2.71

GRPIPPAP

8.33

-6.35

-3.74

QKPAGRPI

8.70

-5.40

-2.79
P32660

PNRPKVTK

6.88

-9.09

-6.48

YDPTDPNR

7.05

-9.42

-6.81

YPPGYDPT

7.65

-4.38

-1.77
P38739

FHDPILPR

6.32

-10.16

-7.55

ASPFHDPI

7.04

-2.77

-0.16

SPFHDPIL

7.78

-7.45

-4.84
Q04749

FNPRKPTL

5.02

-7.44

-4.83

NPVFNPRK

5.76

-9.52

-6.91

SPLPVLPR

6.19

-11.27

-8.66
P38090

CSPNDPDL

8.29

-5.83

-3.22

SPNDPDLT

8.94

-3.65

-1.04

VCSPNDPD

9.89

-2.42

0.19
P47129

GPPLLPPR

3.37

-12.75

-10.14

KPNPPPNR

6.13

-13.29

-10.68

LPNRKPNP

6.82

-9.98

-7.37
P40453

IPPPLPPK

3.24

-9.69

-7.08

KPPDLPIR

4.10

-12.61

-10.00

PPPPPVSM

5.93

-8.11

-5.50
P40095

PPPRSPNR

4.91

-12.15

-9.54

IPVLPPPR

6.37

-12.23

-9.62

RSPNRPTL

6.67

-7.02

-4.41
Q12168

GPPPLPPR

2.57

-13.12

-10.51

IPPPVPNR

4.47

-11.13

-8.52

HPVPKPNI

5.85

-9.64

-7.03
P32793

HGPTHPSN

9.79

-4.36

-1.75

GPTHPSNM

9.96

-3.23

-0.62
P36123

PPDHFPSR

6.63

-12.15

-9.54

TTPKTPPR

6.77

-10.16

-7.55

ARPGNPLY

6.78

-6.20

-3.59
Q08412

VPPQLPTR

4.37

-12.28

-9.67

KWQPLPPE

5.46

-9.18

-6.57

PPEPLDTT

5.47

-6.18

-3.57
P32855

NAPTLPKR

5.29

-11.75

-9.14

APTLPKRK

8.72

-6.73

-4.12

NNAPTLPK

9.73

-7.79

-5.18
Q06409

GKPRKTPR

3.95

-10.60

-7.99

RKTPRPPF

4.38

-8.66

-6.05

PRPPFPFF

5.80

-7.79

-5.18
P32634

EKIPLEPL

4.11

-7.62

-5.01

NSPILPVL

6.59

-6.88

-4.27

EPLPPVPK

6.61

-9.38

-6.77
P53118

NPHDLPSH

6.60

-8.33

-5.72

VENPHDLP

9.04

-3.90

-1.29

PHDLPSHL

10.23

-5.10

-2.49
Q12199

AAPATPPR

5.79

-11.10

-8.49

CNNPNNPQ

8.62

-4.13

-1.52

PATPPRHI

8.81

-5.64

-3.03
P19158

YDPSLPDT

7.54

-6.06

-3.45

SMTPVSPL

8.28

-5.54

-2.93

TPVSPLGL

8.40

-8.74

-6.13
P43638

DAPKLPSA

6.98

-8.34

-5.73

KGRPIPPH

7.43

-8.84

-6.23

IPPHPDAP

7.75

-4.61

-2.00
P53933

APPPLPNR

3.17

-14.05

-11.44

RRPPPPPI

5.90

-6.42

-3.81

PPPPIPST

5.94

-8.53

-5.92
P50101

FPGSPIDK

9.35

-6.30

-3.69

PGSPIDKS

10.44

-4.50

-1.89

VFPGSPID

11.65

-3.76

-1.15
P33400

SPQILPPL

5.44

-9.45

-6.84

LPPLPVGI

7.36

-6.35

-3.74

QPPNAPSY

7.49

-7.36

-4.75
P38238

QSPTNPPY

7.68

-6.31

-3.70

SPTNPPYK

7.76

-8.23

-5.62

DPVQSPTN

9.31

-6.72

-4.11
Q06116

NSPELVPR

5.46

-9.20

-6.59

HSEPVEPF

6.70

-5.59

-2.98

VKPFYPVT

7.30

-4.69

-2.08
Q08229

YNPTIPPR

5.74

-11.05

-8.44

DYNPTIPP

9.18

-7.01

-4.40

RPLPSTPN

9.20

-5.63

-3.02
P38930

AFPDMVPK

6.08

-7.15

-4.54

FPDMVPKH

7.50

-9.36

-6.75

QAFPDMVP

9.70

-5.72

-3.11
Q12446

APPPPPHR

4.65

-11.96

-9.35

APPPPPRR

4.77

-11.99

-9.38

VPPPPPMR

4.83

-11.85

-9.24
P32790

LPPIKPPR

3.65

-11.59

-8.98

PPPAMPAR

3.90

-12.20

-9.59

APAPLDPF

5.22

-7.10

-4.49
P33336

TCDPEDYP

8.90

-5.47

-2.86

DRNLPSHP

11.33

-4.20

-1.59
P40041

GRTLPPVP

9.64

-6.08

-3.47

IPLSPPSS

10.29

-7.31

-4.70

KIPLSPPS

11.22

-4.49

-1.88
P50942

TKPEKPPV

5.57

-7.86

-5.25

PPPPPTSR

5.98

-10.28

-7.67

PCPPIRRK

6.13

-8.00

-5.39
P47030

AFPPEPSM

7.19

-6.08

-3.47

ANNPLDKP

7.81

-5.42

-2.81

PPEPSMSS

8.43

-6.47

-3.86
P40563

APPPVPKK

4.97

-9.01

-6.40

RAPPPVPK

6.10

-6.99

-4.38

VTPKVPER

7.02

-8.44

-5.83
P40528

DIPITPSH

8.93

-6.98

-4.37

PLPYPIAQ

9.15

-5.84

-3.23

NDIPITPS

10.38

-4.93

-2.32
Q12134

QPVPSPMN

8.27

-7.49

-4.88

HQPVPSPM

9.07

-4.21

-1.60

THQPVPSP

9.44

-7.72

-5.11
P53901

NQPPLPPI

4.81

-8.96

-6.35

AMRPIPPL

5.45

-10.09

-7.48

NSPKLPPL

5.55

-7.36

-4.75
P39743

YSNPLTSP

9.56

-5.93

-3.32

ATIPEDNP

10.15

-3.55

-0.94

SNPLTSPV

10.77

-2.54

0.07
P31374

TPDDLPPL

5.01

-10.44

-7.83

PPPPLDFE

5.43

-6.03

-3.42

EQPRLPST

5.63

-7.45

-4.84
P38870

TTPERPKR

6.00

-9.05

-6.44

PKPPPNDK

6.13

-6.20

-3.59

TPERPKRK

7.15

-6.70

-4.09
Q07660

SAFKPIGP

10.18

-5.89

-3.28
P53955

QRNPIPYP

7.77

-8.02

-5.41

QNDPRSPL

7.90

-6.20

-3.59

PIPYPIDA

9.98

-4.23

-1.62

 


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