ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-26.PDB
Scoring matrix: LSB3_1SSH-26_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 16.84
Foldx random average score for Saccharomyces cerevisiae: 13.215

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2176317
Proteins after random average filtering: 5077
 Total fragments: 814101
Proteins after disorder filtering: 2938
 Total fragments: 43140
Proteins after pattern filtering: 1530
 Total fragments: 11467
Proteins after MINT filtering: 51
 Total fragments: 753


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

16.84

-1.59

0.00

Best peptides

DEPPRRWPR

0.00

-12.58

-10.99

         
Interactors      
Q06604

SSPPPLPTR

4.80

-10.72

-9.13

EEKPLLPTR

5.54

-11.32

-9.73

SPPPLPTRR

6.08

-8.92

-7.33

P09119

LTPTTSPVK

10.98

-5.74

-4.15

P25604

DQAPSLPPK

7.18

-8.75

-7.16

TPPLPPKPK

7.32

-6.92

-5.33

KSPHLKPPL

8.41

-6.53

-4.94

P40325

QSQPPRPPR

3.49

-12.65

-11.06

SSQPRPPPR

4.23

-10.63

-9.04

SLPWTYPPR

4.76

-6.85

-5.26

Q12532

PFKPYINGG

12.50

-5.45

-3.86

Q04322

STPPTLPPR

4.77

-11.10

-9.51

TPPTLPPRR

7.08

-9.11

-7.52

QAPLDRPQL

8.76

-7.71

-6.12

P38266

QPPPKPFRR

4.64

-12.12

-10.53

IMPPPKPFR

4.65

-12.01

-10.42

VEPPPPPSR

4.66

-11.49

-9.90

P15891

AAPPPPPRR

5.09

-11.09

-9.50

SAAPPPPPR

5.62

-9.81

-8.22

AAQPPLPSR

6.60

-10.28

-8.69

P53169

PIMPTLPPR

6.18

-12.64

-11.05

NSVPIMPTL

10.10

-6.04

-4.45

MPTLPPRPY

10.44

-5.46

-3.87

Q12344

STSPKLPPR

6.67

-9.36

-7.77

SPKLPPRGK

6.92

-6.02

-4.43

TSSPPLPPR

7.05

-10.29

-8.70

P40494

SRPPRPPPK

4.74

-8.61

-7.02

PRPPPKPLH

7.35

-9.51

-7.92

KSRPPRPPP

7.72

-7.43

-5.84

P53238

PIPPAPTHY

9.62

-7.48

-5.89

AGRPIPPAP

11.06

-6.26

-4.67

QKPAGRPIP

11.20

-6.52

-4.93

P32660

DPNRPKVTK

7.83

-5.54

-3.95

DGHAPMSPF

8.89

-5.60

-4.01

GYDPTDPNR

9.71

-8.78

-7.19

P38739

PFHDPILPR

7.70

-9.11

-7.52

SPFHDPILP

11.28

-5.36

-3.77

ASPFHDPIL

11.58

-4.68

-3.09

Q04749

NSPLPVLPR

5.43

-10.30

-8.71

SPLPVLPRR

6.73

-10.62

-9.03

ITNPVFNPR

8.86

-6.86

-5.27

P47129

SGPPLLPPR

4.64

-10.23

-8.64

RKPNPPPNR

6.53

-8.96

-7.37

NRKPNPPPN

10.27

-6.82

-5.23

P40453

EIPPPLPPK

6.44

-9.13

-7.54

PDLPIRLRK

6.45

-7.94

-6.35

WKPPDLPIR

6.59

-10.74

-9.15

P40095

RIPVLPPPR

6.17

-10.43

-8.84

LPPPRSPNR

6.43

-10.37

-8.78

VLPPPRSPN

9.46

-6.45

-4.86

Q12168

RGPPPLPPR

4.71

-12.64

-11.05

DDPYFPQFR

6.23

-9.86

-8.27

NDDPYFPQF

9.73

-7.50

-5.91

P32793

HGPTHPSNM

12.04

-4.46

-2.87

PTHPSNMSN

12.54

-6.20

-4.61

P36123

FPPDHFPSR

7.86

-8.87

-7.28

TPKTPPRPK

8.59

-4.11

-2.52

KTPPRPKTI

9.59

-7.27

-5.68

Q08412

DVPPQLPTR

4.79

-12.33

-10.74

IELPTQPVR

7.64

-10.61

-9.02

PPQLPTRTK

9.52

-7.71

-6.12

P32855

NNAPTLPKR

7.86

-10.60

-9.01

NAPTLPKRK

10.14

-5.96

-4.37

TNNAPTLPK

11.64

-4.44

-2.85

Q06409

TGKPRKTPR

5.93

-11.83

-10.24

KTPRPPFPF

6.70

-8.51

-6.92

PRKTPRPPF

7.64

-6.88

-5.29

P32634

ETVPTEPTR

7.16

-8.70

-7.11

PPVPKAPSR

7.30

-9.79

-8.20

LEPLPPVPK

7.44

-6.69

-5.10

P53118

ENPHDLPSH

9.69

-8.12

-6.53

VENPHDLPS

12.92

-4.71

-3.12

Q12199

TAAPATPPR

8.04

-9.52

-7.93

AAPATPPRH

10.48

-6.72

-5.13

SVQPTAAPA

12.16

-3.86

-2.27

P19158

MTPVSPLGL

11.01

-6.52

-4.93

SSPSSPPSS

11.37

-4.76

-3.17

SSMTPVSPL

12.11

-4.56

-2.97

P43638

DAPKLPSAF

8.70

-6.61

-5.02

APKLPSAFR

9.24

-7.17

-5.58

PKLPSAFRK

9.75

-7.22

-5.63

P53933

VAPPPLPNR

6.05

-11.27

-9.68

RRRPPPPPI

8.63

-6.90

-5.31

RPPPPPIPS

8.96

-8.17

-6.58

P50101

VFPGSPIDK

9.56

-6.46

-4.87

P33400

VQPPNAPSY

8.20

-8.45

-6.86

TSPQILPPL

10.57

-6.54

-4.95

ILPPLPVGI

10.58

-6.86

-5.27

P38238

QSPTNPPYK

9.40

-6.91

-5.32

VQSPTNPPY

10.32

-6.55

-4.96

LDPVQSPTN

12.81

-5.13

-3.54

Q06116

PNSPELVPR

9.12

-9.43

-7.84

SEPVEPFSA

10.93

-6.28

-4.69

SPELVPRSS

11.16

-4.06

-2.47

Q08229

DYNPTIPPR

5.63

-10.84

-9.25

PVQPGGHYK

10.53

-4.76

-3.17

PSTPNEDSR

11.50

-6.59

-5.00

P38930

QAFPDMVPK

7.79

-7.92

-6.33

AFPDMVPKH

10.54

-6.90

-5.31

PDMVPKHPT

11.39

-5.45

-3.86

Q12446

PPPPPRASR

4.85

-11.43

-9.84

PAPPPPPRR

4.97

-11.22

-9.63

PAPPPPPHR

5.46

-11.81

-10.22

P32790

GPPPAMPAR

4.99

-12.66

-11.07

PIKPPRPTS

9.29

-6.55

-4.96

PAMPARPTA

9.56

-7.40

-5.81

P33336

PSHPSSNNM

12.19

-3.94

-2.35

RNLPSHPSS

12.73

-6.64

-5.05

DRNLPSHPS

12.74

-4.94

-3.35

P40041

KIPLSPPSS

10.82

-6.38

-4.79

P50942

PRPCPPIRR

5.97

-10.86

-9.27

RPCPPIRRK

6.72

-7.71

-6.12

VPRPCPPIR

7.05

-10.30

-8.71

P47030

EAFPPEPSM

9.58

-6.88

-5.29

DEAFPPEPS

11.34

-4.51

-2.92

TDEAFPPEP

12.40

-4.66

-3.07

P40563

RAPPPVPKK

5.96

-8.64

-7.05

RRAPPPVPK

7.96

-6.81

-5.22

EVTPKVPER

8.71

-8.73

-7.14

P40528

NDIPITPSH

12.60

-7.17

-5.58

DIPITPSHD

12.83

-5.45

-3.86

PLPYPIAQV

12.83

-5.70

-4.11

Q12134

THQPVPSPM

9.96

-5.72

-4.13

STHQPVPSP

11.39

-4.20

-2.61

PVPSPMNSQ

12.05

-4.36

-2.77

P53901

PPLPPIPTR

7.39

-10.71

-9.12

MAMRPIPPL

9.23

-7.36

-5.77

QPPLPPIPT

9.95

-7.88

-6.29

P39743

SNPLTSPVA

11.78

-4.89

-3.30

P31374

TKPPPPLDF

7.22

-8.31

-6.72

ISPERPSFR

8.09

-8.55

-6.96

NISPERPSF

8.48

-7.98

-6.39

P38870

PTTPERPKR

7.86

-9.39

-7.80

TTPERPKRK

8.31

-6.46

-4.87

TPKPPPNDK

8.42

-5.27

-3.68

Q07660

PSAFKPIGP

11.60

-5.66

-4.07

P53955

QRNPIPYPI

11.16

-5.34

-3.75

SNQNDPRSP

11.64

-5.01

-3.42

AQRNPIPYP

12.57

-5.24

-3.65

 


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