ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-17.PDB
Scoring matrix: LSB3_1SSH-17_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.73
Foldx random average score for Saccharomyces cerevisiae: 15.892

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2176317
Proteins after random average filtering: 5078
 Total fragments: 1005829
Proteins after disorder filtering: 3139
 Total fragments: 54546
Proteins after pattern filtering: 1415
 Total fragments: 5638
Proteins after MINT filtering: 49
 Total fragments: 306


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.73

1.19

0.00
Best peptides

FRWMRGRSR

0.00

-5.22

-6.40
         
Interactors      
Q06604

EKGPRMPSR

7.70

-5.94

-7.13

GPRMPSRGR

8.82

-8.16

-9.35

LPTRPNKAE

10.75

-6.35

-7.54
P09119

LTPTTSPVK

15.85

-3.78

-4.96
P25604

PPKPKSPHL

9.35

-6.03

-7.21

LPPKPKSPH

11.17

-7.70

-8.88

LPPKPNTQL

11.27

-7.61

-8.79
P40325

RPPRPAANL

9.51

-7.35

-8.54

LYVQPGDPR

10.31

-4.57

-5.76

QSQPPRPPR

10.59

-7.04

-8.22
Q04322

STPPTLPPR

13.90

-4.30

-5.48

DQAPLDRPQ

14.07

-2.90

-4.09
P38266

APTPPAPSR

8.17

-7.19

-8.38

PPKPFRRSQ

8.51

-5.97

-7.15

FLPPPKPFR

9.06

-8.28

-9.46
P15891

AAQPPLPSR

10.14

-5.65

-6.84

ATPEKKPKE

13.23

-1.61

-2.79

RATPEKKPK

13.30

-4.25

-5.44
P53169

SPAQPSASL

11.55

-4.89

-6.07

PIMPTLPPR

13.76

-3.52

-4.71

NSVPIMPTL

14.39

-3.23

-4.42
Q12344

PKLPPRGKQ

11.43

-5.15

-6.34

STSPKLPPR

12.33

-4.88

-6.06

TSSPPLPPR

12.94

-6.03

-7.21
P40494

PRPPPKPLH

11.72

-5.07

-6.26
P53238

RPIPPAPTH

12.02

-6.45

-7.63

PPAPTHYNN

12.76

-6.20

-7.38

IPPAPTHYN

13.55

-5.59

-6.78
P32660

GYDPTDPNR

11.81

-5.16

-6.35

DPNRPKVTK

13.48

-6.15

-7.34

DPTDPNRPK

14.59

-5.39

-6.57
P38739

ASPFHDPIL

13.48

-1.82

-3.00

PFHDPILPR

14.63

-3.60

-4.79

TSPSTAPSS

15.67

-1.14

-2.33
Q04749

SPLPVLPRR

9.10

-5.70

-6.88

NPRKPTLST

12.01

-3.95

-5.13

VFNPRKPTL

13.09

-3.94

-5.13
P38090

VCSPNDPDL

15.78

-1.57

-2.75
P47129

PNPPPNRSQ

11.33

-4.87

-6.05

SGPPLLPPR

13.65

-4.30

-5.48

PLLPPRNTM

13.72

-6.36

-7.54
P40453

WKPPDLPIR

9.19

-5.22

-6.40

PDLPIRLRK

11.83

-8.87

-10.06

PPDLPIRLR

14.15

-7.71

-8.89
P40095

LPPPRSPNR

6.69

-9.41

-10.60

FPDSPSSSS

12.18

-4.17

-5.36

PRSPNRPTL

12.75

-3.18

-4.37
Q12168

RGPPPLPPR

11.72

-6.60

-7.79

PPLPPRANV

13.14

-6.93

-8.12

QHPVPKPNI

13.35

-4.74

-5.93
P32793

PTHPSNMSN

14.02

-2.54

-3.73

GHGPTHPSN

14.07

-2.31

-3.50

GPTHPSNMS

15.22

-4.66

-5.85
P36123

FPPDHFPSR

7.53

-5.59

-6.78

YTTPKTPPR

10.36

-5.20

-6.38

RSQPSDPKL

11.17

-2.94

-4.13
Q08412

LPTQPVRKN

11.99

-6.91

-8.10

IELPTQPVR

12.46

-6.30

-7.48

KNSRPQQPE

14.16

-2.71

-3.90
P32855

NNAPTLPKR

10.25

-4.43

-5.62

TNNAPTLPK

15.40

-3.23

-4.42

YSNPSSSPN

15.87

-1.42

-2.61
Q06409

TGKPRKTPR

11.41

-4.30

-5.48

TPRPPFPFF

12.98

-7.16

-8.35

PRKTPRPPF

13.01

-5.78

-6.96
P32634

PPVPKAPSR

7.13

-5.91

-7.10

LPIVPNPNL

10.22

-8.03

-9.21

IPLPPQEKI

12.05

-7.62

-8.80
P53118

ENPHDLPSH

10.65

-3.03

-4.21
Q12199

TAAPATPPR

13.85

-4.04

-5.22

PATPPRHIC

14.60

-5.45

-6.63

NPNNPQCLH

14.76

-4.85

-6.04
P19158

PSLPDTPTM

14.12

-2.64

-3.83

SMTPVSPLG

15.32

-2.94

-4.13
P43638

PPHPDAPKL

10.60

-5.16

-6.35

PKLPSAFRK

13.25

-3.32

-4.50

PDAPKLPSA

13.55

-2.86

-4.04
P53933

VAPPPLPNR

11.60

-8.22

-9.41

PPPPPIPST

14.12

-4.90

-6.09

NDLPMELPH

14.60

-3.23

-4.42
P50101

PGSPIDKSI

12.79

-4.82

-6.01

FPGSPIDKS

13.88

-4.56

-5.74

GTVFPGSPI

15.69

-2.59

-3.77
P33400

VQPPNAPSY

12.96

-2.80

-3.98

TSPQILPPL

14.98

-2.96

-4.14

PNAPSYQSV

15.26

-2.15

-3.34
P38238

VQSPTNPPY

15.44

-3.12

-4.30

LDPVQSPTN

15.73

-3.09

-4.28
Q06116

PNSPELVPR

13.35

-3.16

-4.35

KPFYPVTSE

13.74

-3.87

-5.05

PELVPRSST

14.23

-3.24

-4.43
Q08229

TPVQPGGHY

10.21

-6.33

-7.52

RPLPSTPNE

11.24

-4.83

-6.02

LPTPVQPGG

12.01

-4.44

-5.63
P38930

QAFPDMVPK

14.43

-2.68

-3.87
Q12446

PPPPPRASR

8.16

-8.82

-10.01

RPLPQLPNR

8.24

-7.23

-8.42

PQLPNRNNR

11.40

-8.07

-9.26
P32790

GPPPAMPAR

11.81

-5.85

-7.04

APAPLDPFK

12.86

-4.13

-5.31

PPAMPARPT

14.89

-5.12

-6.30
P33336

LPSHPSSNN

11.34

-8.10

-9.29

RNLPSHPSS

13.08

-2.00

-3.19

PSHPSSNNM

14.27

-3.03

-4.21
P40041

PLSPPSSSN

13.23

-3.82

-5.00
P50942

LPPVPALSL

9.21

-6.60

-7.79

RPCPPIRRK

9.77

-11.06

-12.25

PPPPTSRHN

11.97

-7.21

-8.39
P47030

EAFPPEPSM

10.55

-5.15

-6.34

FPPEPSMSS

11.68

-5.04

-6.22
P40563

PPTPAGTPN

13.20

-2.98

-4.17

PSERPKRRA

13.46

-6.30

-7.48

NSQPQGPSD

13.59

-0.95

-2.13
P40528

NDIPITPSH

11.25

-4.08

-5.27

IPITPSHDN

15.19

-3.88

-5.06
Q12134

PVPSPMNSQ

14.31

-3.43

-4.62

HQPVPSPMN

14.72

-5.24

-6.43
P53901

LNSPKLPPL

11.35

-3.44

-4.63

PPLPPIPTR

11.70

-6.68

-7.87

MAMRPIPPL

12.32

-5.46

-6.64
P31374

SPERPSFRQ

10.34

-6.75

-7.94

FEQPRLPST

10.93

-3.87

-5.05

PPSPDQENH

12.14

-4.50

-5.69
P38870

PTTPERPKR

10.09

-5.45

-6.63

TPERPKRKS

11.68

-6.46

-7.64

TPTTPERPK

13.59

-6.27

-7.46
P53955

NQNDPRSPL

15.14

-3.55

-4.73

 


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