ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1SSH-12.PDB
Scoring matrix: LSB3_1SSH-12_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.54
Foldx random average score for Saccharomyces cerevisiae: 13.896

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 833838
Proteins after disorder filtering: 3050
 Total fragments: 47530
Proteins after pattern filtering: 1454
 Total fragments: 8477
Proteins after MINT filtering: 50
 Total fragments: 598


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

16.54

-1.42

0.00
Best peptides

REWRRKRK

0.00

-8.05

-6.63
         
Interactors      
Q06604

PSPPAKRI

7.03

-6.78

-5.36

PRMPSRGR

7.66

-9.45

-8.03

FEKGPRMP

7.90

-8.81

-7.39
P09119

MSAIPITP

12.49

-3.56

-2.14

PTTSPVKK

13.25

-2.21

-0.79

SAQVPLTP

13.27

-3.18

-1.76
P25604

LPPKPKSP

8.66

-6.45

-5.03

KSPHLKPP

9.22

-5.17

-3.75

HLKPPLPP

10.38

-5.13

-3.71
P40325

PRPPPRPQ

8.43

-8.05

-6.63

PPRPPRPA

8.67

-8.74

-7.32

QSQPPRPP

9.23

-9.08

-7.66
Q12532

PFKPYING

12.23

-3.80

-2.38
Q04322

NATPSKSP

9.52

-2.30

-0.88

QAPLDRPQ

9.64

-7.98

-6.56

PTLPPRRI

9.98

-9.34

-7.92
P38266

IMPPPKPF

7.80

-4.69

-3.27

FLPPPKPF

7.83

-7.05

-5.63

PPKPFRRS

7.85

-10.31

-8.89
P15891

PEKKPKEN

6.62

-5.91

-4.49

PPPPPRRA

7.95

-10.69

-9.27

RATPEKKP

8.35

-2.71

-1.29
P53169

PIMPTLPP

10.23

-6.19

-4.77

PTLPPRPY

11.26

-8.86

-7.44

IMPTLPPR

12.41

-3.16

-1.74
Q12344

TSTSPKLP

9.89

-1.59

-0.17

PKLPPRGK

10.84

-8.89

-7.47

TSPKLPPR

11.05

-4.35

-2.93
P40494

KSRPPRPP

7.48

-8.08

-6.66

PRPPPKPL

8.14

-5.13

-3.71

DKSRPPRP

8.55

-4.96

-3.54
P53238

QKPAGRPI

8.86

-8.07

-6.65

PAGRPIPP

11.44

-4.08

-2.66

GRPIPPAP

12.26

-3.07

-1.65
P32660

DPNRPKVT

8.92

-4.24

-2.82

PTDPNRPK

10.35

-7.10

-5.68

DGHAPMSP

12.24

-3.25

-1.83
P38739

LASPFHDP

13.03

-2.69

-1.27

PFHDPILP

13.15

-2.53

-1.11

FHDPILPR

13.27

-4.33

-2.91
Q04749

PVFNPRKP

8.15

-9.91

-8.49

VFNPRKPT

9.38

-4.98

-3.56

FNPRKPTL

10.84

-5.32

-3.90
P47129

TLPNRKPN

9.06

-5.53

-4.11

RKPNPPPN

11.42

-4.12

-2.70

SGPPLLPP

11.52

-4.78

-3.36
P40453

LRKRPPPP

9.38

-5.61

-4.19

PEPPSWKP

9.51

-5.42

-4.00

RKRPPPPP

9.64

-4.41

-2.99
P40095

VLPPPRSP

8.84

-9.04

-7.62

PRSPNRPT

9.94

-7.21

-5.79

PPPRSPNR

11.42

-4.73

-3.31
Q12168

QHPVPKPN

8.69

-4.87

-3.45

RGPPPLPP

10.16

-5.24

-3.82

PYFPQFRS

10.22

-7.09

-5.67
P32793

HGPTHPSN

13.52

-3.10

-1.68

GHGPTHPS

13.76

-2.31

-0.89
P36123

TPPRPKTI

7.41

-6.64

-5.22

PKTPPRPK

7.47

-7.43

-6.01

LYTTPKTP

9.61

-2.35

-0.93
Q08412

KKWQPLPP

9.30

-5.67

-4.25

PTQPVRKN

10.13

-8.54

-7.12

DVPPQLPT

11.39

-4.44

-3.02
P32855

APTLPKRK

8.31

-5.01

-3.59

NNAPTLPK

12.70

-4.05

-2.63

NAPTLPKR

12.74

-3.56

-2.14
Q06409

TGKPRKTP

8.18

-6.39

-4.97

PRKTPRPP

8.34

-7.68

-6.26

GKPRKTPR

9.78

-5.35

-3.93
P32634

QEKIPLEP

9.75

-4.80

-3.38

LPPVPKAP

9.89

-3.57

-2.15

PTEPTRYN

10.27

-7.98

-6.56
P53118

ENPHDLPS

12.89

-3.54

-2.12
Q12199

PATPPRHI

9.26

-7.10

-5.68

APATPPRH

13.29

-3.30

-1.88

TTPSVQPT

13.40

-3.32

-1.90
P19158

SSMTPVSP

12.15

-3.27

-1.85

GEYDPSLP

12.90

-2.61

-1.19

SSPSSPPS

13.20

-2.56

-1.14
P43638

AKGRPIPP

10.46

-3.75

-2.33

GRPIPPHP

11.86

-3.72

-2.30

KGRPIPPH

12.14

-4.46

-3.04
P53933

TRRRPPPP

9.28

-6.07

-4.65

RRRPPPPP

10.54

-4.50

-3.08

DLPMELPH

10.98

-5.49

-4.07
P50101

TVFPGSPI

12.66

-3.25

-1.83
P33400

TSPQILPP

12.30

-3.88

-2.46

ILPPLPVG

13.25

-4.06

-2.64

STSPQILP

13.26

-3.33

-1.91
P38238

QSPTNPPY

13.08

-3.00

-1.58

SPTNPPYK

13.49

-1.82

-0.40
Q06116

GVKPFYPV

11.33

-6.62

-5.20

PELVPRSS

11.38

-8.54

-7.12

SEPVEPFS

12.40

-2.88

-1.46
Q08229

NPTIPPRS

11.73

-3.27

-1.85

YNPTIPPR

12.93

-3.28

-1.86

PTIPPRSK

13.03

-5.72

-4.30
P38930

PDMVPKHP

7.59

-5.08

-3.66

QAFPDMVP

10.71

-4.82

-3.40

AFPDMVPK

13.51

-2.87

-1.45
Q12446

PPPPPRRG

7.98

-10.65

-9.23

PPPPHRHV

9.49

-9.33

-7.91

PPPPRRGP

9.84

-9.13

-7.71
P32790

PAMPARPT

7.63

-10.15

-8.73

PIKPPRPT

7.63

-8.20

-6.78

PLDPFKTG

11.41

-3.66

-2.24
P33336

CDPEDYPT

13.27

-5.25

-3.83

RNLPSHPS

13.46

-4.59

-3.17

NLPSHPSS

13.71

-3.24

-1.82
P40041

KIPLSPPS

12.99

-3.08

-1.66
P50942

PCPPIRRK

7.01

-9.72

-8.30

STKPEKPP

7.91

-4.89

-3.47

STPKPLPP

9.96

-5.50

-4.08
P47030

ETKPPRAP

8.15

-8.96

-7.54

EAFPPEPS

12.62

-3.11

-1.69

AFPPEPSM

13.20

-3.57

-2.15
P40563

PSERPKRR

5.69

-6.55

-5.13

PPPVPKKP

9.28

-6.10

-4.68

RAPPPVPK

11.14

-4.19

-2.77
P40528

PITPSHDN

12.25

-0.51

0.91

DIPITPSH

12.68

-3.31

-1.89

PLPYPIAQ

12.88

-3.75

-2.33
Q12134

PVPSPMNS

12.31

-2.84

-1.42

HQPVPSPM

13.82

-2.67

-1.25
P53901

MAMRPIPP

8.04

-6.83

-5.41

GLNSPKLP

11.11

-2.72

-1.30

NDPIILPP

11.24

-3.83

-2.41
P31374

PERPSFRQ

9.40

-6.00

-4.58

NISPERPS

9.72

-6.53

-5.11

RKTKPPPP

9.96

-2.91

-1.49
P38870

TPERPKRK

6.66

-7.28

-5.86

PERPKRKS

6.73

-7.87

-6.45

PTTPERPK

8.76

-6.47

-5.05
Q07660

SAFKPIGP

10.46

-4.96

-3.54
P53955

RNPIPYPI

10.40

-5.90

-4.48

NQNDPRSP

11.77

-6.71

-5.29

PIPYPIDA

13.11

-3.26

-1.84

 


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