ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-28.PDB
Scoring matrix: LSB3_1OOT-28_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.05
Foldx random average score for Saccharomyces cerevisiae: 14.747

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171239
Proteins after random average filtering: 5078
 Total fragments: 903060
Proteins after disorder filtering: 2957
 Total fragments: 39449
Proteins after pattern filtering: 1422
 Total fragments: 7896
Proteins after MINT filtering: 48
 Total fragments: 480


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

18.05

0.49

0.00

Best peptides

FPYRPRRPRR

0.00

-10.24

-10.73

         
Interactors      
Q06604

KPLLPTRPNK

6.59

-10.19

-10.68

PPLPTRRDHI

7.87

-8.29

-8.78

FEKGPRMPSR

8.26

-7.01

-7.50

P09119

SAQVPLTPTT

13.54

-4.49

-4.98

NSAQVPLTPT

14.35

-2.84

-3.33

VPLTPTTSPV

14.71

-3.79

-4.28

P25604

APSLPPKPNT

10.23

-7.71

-8.20

TPPLPPKPKS

11.25

-5.70

-6.19

PPPPPPQPAS

11.42

-5.29

-5.78

P40325

QPPRPPRPAA

5.47

-9.51

-10.00

QSRPHQRPST

7.81

-6.74

-7.23

QPRPPPRPQQ

8.04

-9.15

-9.64

Q04322

STPPTLPPRR

12.59

-6.51

-7.00

TPPTLPPRRI

12.77

-5.42

-5.91

DQAPLDRPQL

13.21

-6.87

-7.36

P38266

PPPKPFRRSQ

6.69

-9.46

-9.95

QPLPPPRGQV

6.74

-8.91

-9.40

PPPPTHRDRG

6.87

-9.26

-9.75

P15891

APPPPPRRAT

5.34

-9.03

-9.52

QPPLPSRNVA

7.81

-8.56

-9.05

EAAQPPLPSR

9.94

-5.65

-6.14

P53169

VPIMPTLPPR

10.99

-6.49

-6.98

SPAQPSASLT

11.45

-4.29

-4.78

ANSVPIMPTL

13.58

-5.84

-6.33

Q12344

SPPLPPRQNV

7.14

-9.49

-9.98

SPKLPPRGKQ

8.68

-8.81

-9.30

PKLPPRGKQR

12.19

-8.10

-8.59

P40494

NQPPNMMPVT

10.40

-4.96

-5.45

PPRPPPKPLH

11.74

-6.64

-7.13

PPNMMPVTHV

12.21

-6.33

-6.82

P53238

IPPAPTHYNN

11.99

-6.27

-6.76

RPIPPAPTHY

13.41

-5.64

-6.13

GRPIPPAPTH

14.18

-5.96

-6.45

P32660

DPTDPNRPKV

8.14

-7.67

-8.16

DHYPPGYDPT

10.35

-4.36

-4.85

HAPMSPFEDT

11.18

-5.21

-5.70

P38739

SPFHDPILPR

12.94

-4.74

-5.23

SPSTAPSSTT

14.13

-5.25

-5.74

AGSPPNDPST

14.25

-2.84

-3.33

Q04749

LPVLPRRIST

4.75

-9.63

-10.12

PLPVLPRRIS

8.03

-7.64

-8.13

NPVFNPRKPT

8.16

-6.24

-6.73

P38090

VCSPNDPDLT

13.95

-3.12

-3.61

P47129

PNPPPNRSQR

7.20

-6.66

-7.15

PPLLPPRNTM

9.02

-8.61

-9.10

RKPNPPPNRS

11.38

-4.35

-4.84

P40453

PPDLPIRLRK

6.65

-9.63

-10.12

PPPPVSMPTT

10.01

-7.68

-8.17

SWKPPDLPIR

10.44

-5.21

-5.70

P40095

PPRSPNRPTL

11.15

-9.60

-10.09

RIPVLPPPRS

11.56

-5.15

-5.64

VLPPPRSPNR

12.06

-9.40

-9.89

Q12168

PPPVPNRPGG

6.38

-9.47

-9.96

PPPLPPRANV

6.62

-10.41

-10.90

DDPYFPQFRS

11.35

-3.67

-4.16

P32793

LGHGPTHPSN

13.93

-3.43

-3.92

PTHPSNMSNV

14.08

-5.36

-5.85

P36123

TPKTPPRPKT

6.07

-6.81

-7.30

LFPPDHFPSR

8.31

-5.58

-6.07

FPPDHFPSRS

11.98

-5.62

-6.11

Q08412

PPQLPTRTKS

7.48

-9.32

-9.81

DIELPTQPVR

11.19

-6.78

-7.27

EDVPPQLPTR

11.46

-5.19

-5.68

P32855

TNNAPTLPKR

12.69

-4.21

-4.70

NNAPTLPKRK

14.04

-4.04

-4.53

Q06409

KPRKTPRPPF

8.15

-10.15

-10.64

KTPRPPFPFF

9.03

-6.69

-7.18

HSPFSPFNSS

11.84

-3.96

-4.45

P32634

LPPVPKAPSR

8.73

-6.88

-7.37

VPTEPTRYNY

9.33

-8.54

-9.03

NIPLPPQEKI

12.51

-5.50

-5.99

P53118

PHDLPSHLGS

11.95

-4.15

-4.64

NPHDLPSHLG

14.55

-4.23

-4.72

Q12199

APATPPRHIC

7.70

-8.08

-8.57

PATPPRHICN

13.82

-4.10

-4.59

PNNPQCLHCG

14.43

-4.78

-5.27

P19158

SPSSPPSSSS

13.19

-3.42

-3.91

GEYDPSLPDT

14.39

-5.08

-5.57

SSMTPVSPLG

14.39

-3.33

-3.82

P43638

GRPIPPHPDA

11.49

-4.26

-4.75

VPTNIPPPRG

11.56

-6.35

-6.84

HPDAPKLPSA

12.00

-4.92

-5.41

P53933

RPPPPPIPST

8.18

-6.02

-6.51

RVAPPPLPNR

11.06

-7.55

-8.04

TRRRPPPPPI

13.12

-5.08

-5.57

P50101

FPGSPIDKSI

11.96

-4.24

-4.73

PGSPIDKSIG

13.94

-6.31

-6.80

P33400

PPNAPSYQSV

9.31

-6.20

-6.69

PQILPPLPVG

12.77

-6.41

-6.90

QILPPLPVGI

13.66

-5.06

-5.55

Q06116

SPELVPRSST

5.86

-8.33

-8.82

NGVKPFYPVT

8.38

-5.57

-6.06

EPNSPELVPR

13.15

-5.00

-5.49

Q08229

NPTIPPRSKD

7.82

-8.91

-9.40

LPSTPNEDSR

11.64

-5.46

-5.95

YNPTIPPRSK

12.38

-5.42

-5.91

P38930

FPDMVPKHPT

10.10

-7.33

-7.82

Q12446

APPPPPRASR

4.19

-8.90

-9.39

PPPPPHRHVT

5.43

-8.82

-9.31

LPQLPNRNNR

6.10

-9.97

-10.46

P32790

PPIKPPRPTS

6.22

-9.01

-9.50

PPAMPARPTA

7.97

-9.58

-10.07

EGPPPAMPAR

10.09

-5.07

-5.56

P33336

DRNLPSHPSS

10.69

-4.95

-5.44

LPSHPSSNNM

14.52

-5.89

-6.38

P40041

KIPLSPPSSS

13.03

-5.25

-5.74

IPLSPPSSSN

13.94

-4.21

-4.70

P50942

RPCPPIRRKS

6.60

-8.73

-9.22

PCPPIRRKSS

7.32

-8.63

-9.12

PPPPTSRHNK

9.02

-9.52

-10.01

P47030

AFPPEPSMSS

12.81

-2.39

-2.88

EAFPPEPSMS

13.75

-3.10

-3.59

P40563

RRAPPPVPKK

12.81

-4.95

-5.44

APPPVPKKPS

13.06

-5.44

-5.93

SEVTPKVPER

13.39

-3.29

-3.78

P40528

IPITPSHDNN

12.53

-6.13

-6.62

LNDIPITPSH

12.56

-4.83

-5.32

PLPYPIAQVG

14.18

-4.31

-4.80

Q12134

QPVPSPMNSQ

12.62

-5.75

-6.24

HQPVPSPMNS

13.25

-4.36

-4.85

PVPSPMNSQT

14.67

-3.93

-4.42

P53901

LPPIPTRDDM

7.30

-8.90

-9.39

QPPLPPIPTR

9.80

-7.53

-8.02

SPKLPPLPTT

10.87

-6.77

-7.26

P31374

DFEQPRLPST

9.62

-5.52

-6.01

NNISPERPSF

9.65

-5.32

-5.81

LDFEQPRLPS

10.04

-4.85

-5.34

P38870

TPTTPERPKR

6.68

-7.54

-8.03

TTPERPKRKS

13.60

-2.54

-3.03

PTTPERPKRK

14.35

-5.08

-5.57

P53955

QRNPIPYPID

11.10

-6.75

-7.24

NPIPYPIDAV

12.37

-5.28

-5.77

RNPIPYPIDA

12.99

-3.09

-3.58

 


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