ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-23.PDB
Scoring matrix: LSB3_1OOT-23_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.97
Foldx random average score for Saccharomyces cerevisiae: 11.810

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2186473
Proteins after random average filtering: 5078
 Total fragments: 1097543
Proteins after disorder filtering: 3313
 Total fragments: 54112
Proteins after pattern filtering: 1421
 Total fragments: 5226
Proteins after MINT filtering: 48
 Total fragments: 277


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.97

-1.38

0.00

Best peptides

RPLLPRW

0.00

-5.54

-4.16

         
Interactors      
Q06604

KPLLPTR

3.97

-6.48

-5.10

PPPLPTR

7.72

-4.12

-2.74

GPRMPSR

8.13

-4.06

-2.68

P09119

QVPLTPT

10.03

-3.34

-1.96

VPLTPTT

10.79

-2.15

-0.77

LTPTTSP

11.67

-3.70

-2.32

P25604

KPPLPPP

6.69

-5.69

-4.31

KSPHLKP

7.46

-4.09

-2.71

PHLKPPL

7.58

-5.58

-4.20

P40325

RPPRPAA

6.60

-5.10

-3.72

QPPRPPR

7.01

-4.47

-3.09

RPHQRPS

8.15

-3.28

-1.90

Q04322

SPPLPPR

7.32

-4.34

-2.96

PPTLPPR

7.83

-3.60

-2.22

QAPLDRP

8.40

-4.35

-2.97

P38266

VPILPPR

5.60

-3.88

-2.50

YPIEPSL

6.38

-5.78

-4.40

PPPKPFR

7.70

-4.36

-2.98

P15891

QPPLPSR

6.98

-4.24

-2.86

TPEKKPK

9.49

-3.31

-1.93

PEKKPKE

9.69

-3.97

-2.59

P53169

MPTLPPR

6.19

-5.04

-3.66

VPIMPTL

8.22

-4.59

-3.21

YSPAQPS

9.39

-5.05

-3.67

Q12344

SPKLPPR

7.08

-3.67

-2.29

SPPLPPR

7.32

-4.34

-2.96

TSPKLPP

10.51

-3.94

-2.56

P40494

RPPRPPP

5.25

-5.75

-4.37

KPTLIPD

8.59

-4.68

-3.30

QPPNMMP

9.79

-2.87

-1.49

P53238

PAGRPIP

10.20

-4.02

-2.64

KPAGRPI

10.35

-3.27

-1.89

QKPAGRP

10.51

-3.32

-1.94

P32660

HAPMSPF

8.64

-4.16

-2.78

YPPGYDP

9.09

-5.27

-3.89

YDPTDPN

9.67

-4.04

-2.66

P38739

SPFHDPI

9.55

-1.72

-0.34

Q04749

LPVLPRR

5.09

-5.06

-3.68

NPRKPTL

8.74

-3.48

-2.10

FNPRKPT

9.61

-4.84

-3.46

P38090

CSPNDPD

11.77

-1.49

-0.11

P47129

PPLLPPR

5.08

-5.18

-3.80

RKPNPPP

6.96

-4.31

-2.93

LPNRKPN

9.05

-4.40

-3.02

P40453

PPDLPIR

7.43

-4.11

-2.73

PPPLPPK

8.62

-4.15

-2.77

KPPDLPI

10.33

-1.88

-0.50

P40095

RSPNRPT

7.81

-3.67

-2.29

IPVLPPP

8.36

-4.97

-3.59

PPRSPNR

9.67

-3.05

-1.67

Q12168

PPPLPPR

6.98

-4.56

-3.18

PVPKPNI

10.75

-3.12

-1.74

VPNRPGG

10.96

-2.85

-1.47

P32793

GPTHPSN

11.40

-1.25

0.13

P36123

RPGNPLY

7.33

-3.05

-1.67

TPPRPKT

9.09

-3.38

-2.00

TPKTPPR

9.69

-1.99

-0.61

Q08412

PPQLPTR

8.18

-4.27

-2.89

WQPLPPE

8.30

-4.83

-3.45

LPTQPVR

8.93

-3.40

-2.02

P32855

APTLPKR

7.79

-3.33

-1.95

Q06409

KPRKTPR

5.91

-4.88

-3.50

RPPFPFF

6.25

-4.65

-3.27

KTPRPPF

6.84

-5.75

-4.37

P32634

YPLNLPI

5.05

-5.52

-4.14

KIPLEPL

6.96

-5.28

-3.90

SPILPVL

7.79

-4.18

-2.80

P53118

ENPHDLP

9.45

-2.10

-0.72

PHDLPSH

10.83

-4.44

-3.06

Q12199

APATPPR

10.91

-2.04

-0.66

NPNNPQC

11.31

-1.46

-0.08

NNPNNPQ

11.76

-1.10

0.28

P19158

YDPSLPD

9.44

-4.21

-2.83

DPSLPDT

10.29

-2.64

-1.26

LPDTPTM

11.03

-2.48

-1.10

P43638

IPPHPDA

9.44

-2.34

-0.96

HPDAPKL

9.75

-2.96

-1.58

APKLPSA

9.89

-4.29

-2.91

P53933

PPPLPNR

7.54

-4.39

-3.01

YPGNPTS

9.56

-3.23

-1.85

DLPMELP

10.42

-3.73

-2.35

P32790

PPIKPPR

6.92

-4.26

-2.88

PAPLDPF

8.62

-3.88

-2.50

KPPRPTS

8.80

-4.72

-3.34

P33400

PQILPPL

7.53

-4.29

-2.91

LPPLPVG

8.87

-4.90

-3.52

TSPQILP

10.71

-3.11

-1.73

P38238

SPTNPPY

11.69

-0.71

0.67

Q06116

SPELVPR

7.28

-3.03

-1.65

KPFYPVT

11.35

-1.89

-0.51

Q08229

YNPTIPP

9.13

-4.46

-3.08

LPSTPNE

10.81

-2.51

-1.13

RPLPSTP

11.36

-5.22

-3.84

P38930

MVPKHPT

9.66

-3.29

-1.91

FPDMVPK

9.76

-5.05

-3.67

Q12446

LPQLPNR

6.51

-5.09

-3.71

RLPAPPP

7.57

-4.50

-3.12

RGPAPPP

7.72

-4.33

-2.95

P33336

LPSHPSS

8.48

-2.42

-1.04

CDPEDYP

11.31

-2.46

-1.08

P40041

KIPLSPP

7.80

-5.75

-4.37

IPLSPPS

9.96

-3.10

-1.72

RTLPPVP

11.62

-4.39

-3.01

P50942

KPEKPPV

7.86

-4.50

-3.12

HPLKPCD

8.00

-4.76

-3.38

IVPRPCP

9.36

-4.22

-2.84

P47030

NNPLDKP

9.23

-5.26

-3.88

FPPEPSM

10.18

-4.00

-2.62

P40563

PSERPKR

7.09

-2.53

-1.15

PGQLPPS

10.60

-3.27

-1.89

VTPKVPE

10.91

-3.30

-1.92

P40528

IPITPSH

10.85

-2.94

-1.56

P53901

QPPLPPI

8.02

-4.30

-2.92

SPKLPPL

8.04

-4.59

-3.21

LPPLPTT

8.42

-5.13

-3.75

P39743

NPLTSPV

10.36

-1.98

-0.60

SNPLTSP

10.49

-4.20

-2.82

P31374

SPERPSF

8.19

-3.24

-1.86

QPRLPST

8.33

-4.51

-3.13

PDDLPPL

9.12

-4.07

-2.69

P38870

TPERPKR

6.48

-2.91

-1.53

STPKPPP

10.74

-3.69

-2.31

TPTTPER

11.12

-2.20

-0.82

P53955

NDPRSPL

8.93

-3.90

-2.52

RNPIPYP

10.02

-8.35

-6.97

 


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