ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-13.PDB
Scoring matrix: LSB3_1OOT-13_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 17.36
Foldx random average score for Saccharomyces cerevisiae: 15.821

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 1040748
Proteins after disorder filtering: 3317
 Total fragments: 81273
Proteins after pattern filtering: 1625
 Total fragments: 12285
Proteins after MINT filtering: 51
 Total fragments: 727


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

17.36

0.78

0.00

Best peptides

RPPLPPRR

0.00

-12.00

-12.78

         
Interactors      
Q06604

KPLLPTRP

2.59

-9.72

-10.50

PPPLPTRR

2.76

-10.76

-11.54

GPRMPSRG

4.07

-11.83

-12.61

P09119

PTTSPVKK

11.43

-4.90

-5.68

MSAIPITP

12.08

-4.47

-5.25

TPTTSPVK

12.69

-4.35

-5.13

P25604

APSLPPKP

6.57

-7.57

-8.35

TPPLPPKP

6.66

-9.73

-10.51

KPPLPPPP

8.93

-7.86

-8.64

P40325

QPPRPPRP

3.09

-10.72

-11.50

QPRPPPRP

5.04

-7.69

-8.47

PWTYPPRF

6.79

-5.66

-6.44

Q04322

PPTLPPRR

2.78

-11.37

-12.15

SPPLPPRA

3.94

-10.69

-11.47

PTLPPRRI

8.44

-4.45

-5.23

P38266

PPPKPFRR

3.10

-11.81

-12.59

VPILPPRN

3.44

-11.97

-12.75

PPPKPFRH

3.83

-11.00

-11.78

P15891

QPPLPSRN

3.70

-10.48

-11.26

APPPPPRR

4.43

-11.44

-12.22

PPPPPRRA

5.83

-8.26

-9.04

P53169

MPTLPPRP

1.54

-11.57

-12.35

VPIMPTLP

8.91

-9.07

-9.85

ANSVPIMP

11.82

-6.38

-7.16

Q12344

SPPLPPRQ

3.89

-10.53

-11.31

SPKLPPRG

4.00

-10.14

-10.92

PPLPPRQN

12.29

-5.20

-5.98

P40494

DKSRPPRP

5.25

-9.16

-9.94

RPPRPPPK

7.53

-9.55

-10.33

PPRPPPKP

8.43

-5.87

-6.65

P53238

IPPAPTHY

10.42

-6.22

-7.00

RPIPPAPT

11.18

-5.91

-6.69

KPAGRPIP

12.71

-3.54

-4.32

P32660

DPTDPNRP

6.70

-7.12

-7.90

DPNRPKVT

10.24

-7.34

-8.12

YDPTDPNR

12.23

-1.77

-2.55

P38739

SPFHDPIL

11.80

-2.22

-3.00

PFHDPILP

12.47

-5.90

-6.68

PPNDPSTL

13.90

-4.46

-5.24

Q04749

LPVLPRRI

2.27

-10.51

-11.29

NPVFNPRK

5.57

-6.38

-7.16

NPRKPTLS

9.84

-7.40

-8.18

P38090

SPNDPDLT

13.20

-5.78

-6.56

IVCSPNDP

15.04

-2.58

-3.36

P47129

PPLLPPRN

3.84

-10.05

-10.83

PNPPPNRS

8.05

-8.22

-9.00

KPNPPPNR

10.19

-6.31

-7.09

P40453

PPDLPIRL

4.23

-9.54

-10.32

PPPLPPKI

6.56

-9.40

-10.18

MPTTPEIP

9.38

-8.36

-9.14

P40095

PPRSPNRP

6.15

-9.23

-10.01

PVLPPPRS

7.50

-6.97

-7.75

IPVLPPPR

8.13

-8.82

-9.60

Q12168

PPPLPPRA

3.55

-10.64

-11.42

PPPVPNRP

5.08

-8.06

-8.84

PYFPQFRS

10.16

-5.68

-6.46

P32793

GPTHPSNM

12.16

-5.07

-5.85

LGHGPTHP

13.99

-3.33

-4.11

PTHPSNMS

14.84

-2.66

-3.44

P36123

TPKTPPRP

5.88

-9.09

-9.87

PDHFPSRS

7.00

-7.99

-8.77

RPGNPLYT

9.82

-6.41

-7.19

Q08412

LPTQPVRK

3.48

-10.52

-11.30

PPQLPTRT

4.39

-9.53

-10.31

DIELPTQP

10.65

-6.39

-7.17

P32855

APTLPKRK

3.26

-10.45

-11.23

NPSSSPNS

13.84

-2.19

-2.97

TNNAPTLP

13.93

-4.93

-5.71

Q06409

KPRKTPRP

5.88

-6.52

-7.30

FPTVPVVE

9.50

-6.89

-7.67

KTPRPPFP

10.09

-5.24

-6.02

P32634

VPTEPTRY

5.88

-8.49

-9.27

LEPLPPVP

9.13

-6.22

-7.00

SPILPVLN

9.97

-7.82

-8.60

P53118

PHDLPSHL

12.08

-5.42

-6.20

ENPHDLPS

15.23

-1.00

-1.78

Q12199

APATPPRH

5.72

-9.65

-10.43

NPNNPQCL

12.85

-5.21

-5.99

ICNNPNNP

13.02

-4.19

-4.97

P19158

LPDTPTMS

9.90

-7.65

-8.43

DPSLPDTP

10.83

-6.38

-7.16

MTPVSPLG

12.09

-3.87

-4.65

P43638

APKLPSAF

10.73

-5.93

-6.71

IPPHPDAP

10.89

-5.16

-5.94

HPDAPKLP

11.32

-8.45

-9.23

P53933

PPPLPNRQ

4.08

-10.76

-11.54

RPPPPPIP

7.65

-7.96

-8.74

RVAPPPLP

10.07

-7.05

-7.83

P50101

FPGSPIDK

12.13

-4.28

-5.06

VFPGSPID

12.68

-2.56

-3.34

GTVFPGSP

15.64

-2.28

-3.06

P33400

LPPLPVGI

10.02

-7.37

-8.15

PQILPPLP

10.52

-7.39

-8.17

PPNAPSYQ

12.58

-4.76

-5.54

P38238

SPTNPPYK

11.27

-6.23

-7.01

DPVQSPTN

13.40

-3.11

-3.89

PVQSPTNP

14.26

-3.01

-3.79

Q06116

SPELVPRS

8.28

-7.09

-7.87

KPFYPVTS

11.77

-5.35

-6.13

EPNSPELV

12.05

-7.07

-7.85

Q08229

NPTIPPRS

5.50

-8.91

-9.69

NDYNPTIP

11.47

-3.92

-4.70

RPLPSTPN

12.16

-2.57

-3.35

P38930

FPDMVPKH

8.99

-7.10

-7.88

PDMVPKHP

12.04

-3.94

-4.72

QAFPDMVP

14.59

-0.80

-1.58

Q12446

LPQLPNRN

3.02

-10.38

-11.16

APPPPPRR

4.43

-11.44

-12.22

APPPPPRA

5.59

-9.34

-10.12

P32790

PPAMPARP

3.97

-10.68

-11.46

PPIKPPRP

3.99

-10.78

-11.56

APLDPFKT

9.86

-6.44

-7.22

P33336

LPSHPSSN

11.67

-5.08

-5.86

DRNLPSHP

11.75

-5.28

-6.06

RNLPSHPS

14.12

-0.22

-1.00

P40041

GRTLPPVP

11.00

-6.15

-6.93

KIPLSPPS

11.51

-4.31

-5.09

IPLSPPSS

11.90

-5.03

-5.81

P50942

RPCPPIRR

3.61

-11.11

-11.89

KPEKPPVV

8.67

-7.55

-8.33

PPPPTSRH

9.13

-5.24

-6.02

P47030

FPPEPSMS

8.93

-7.41

-8.19

PPEPSMSS

14.41

-2.08

-2.86

ETKPPRAP

14.48

-3.38

-4.16

P40563

PSERPKRR

4.77

-9.80

-10.58

TPKVPERP

5.58

-8.78

-9.56

PPPVPKKP

8.03

-6.76

-7.54

P40528

IPITPSHD

11.29

-6.45

-7.23

LNDIPITP

12.62

-3.84

-4.62

PLPYPIAQ

14.02

-4.14

-4.92

Q12134

QPVPSPMN

11.68

-4.52

-5.30

HQPVPSPM

13.51

-3.33

-4.11

PVPSPMNS

14.09

-3.22

-4.00

P53901

LPPIPTRD

4.20

-9.87

-10.65

QPPLPPIP

7.71

-9.07

-9.85

SPKLPPLP

8.95

-8.05

-8.83

P39743

NPLTSPVA

13.12

-2.89

-3.67

P31374

NNISPERP

8.31

-6.26

-7.04

PERPSFRQ

8.84

-4.79

-5.57

SPERPSFR

9.14

-7.96

-8.74

P38870

TPERPKRK

3.73

-11.07

-11.85

TPTTPERP

6.85

-7.86

-8.64

TPKPPPND

12.67

-5.43

-6.21

Q07660

SAFKPIGP

14.68

-4.23

-5.01

P53955

RNPIPYPI

11.71

-4.85

-5.63

PIPYPIDA

15.13

-2.28

-3.06

NQNDPRSP

15.23

-3.27

-4.05

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER