ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-12.PDB
Scoring matrix: LSB3_1OOT-12_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.61
Foldx random average score for Saccharomyces cerevisiae: 12.397

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2181395
Proteins after random average filtering: 5078
 Total fragments: 927322
Proteins after disorder filtering: 3123
 Total fragments: 59105
Proteins after pattern filtering: 1527
 Total fragments: 10250
Proteins after MINT filtering: 51
 Total fragments: 681


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

14.61

-1.80

0.00
Best peptides

RRMRRRRK

0.00

-8.17

-6.37
         
Interactors      
Q06604

PRMPSRGR

3.60

-8.74

-6.94

PSPPAKRI

6.55

-5.41

-3.61

FEKGPRMP

6.88

-7.95

-6.15
P09119

MSAIPITP

10.57

-2.93

-1.13

SAQVPLTP

11.75

-3.16

-1.36

PTTSPVKK

11.86

-2.72

-0.92
P25604

KSPHLKPP

6.98

-4.07

-2.27

LPPKPKSP

8.25

-4.60

-2.80

HLKPPLPP

8.64

-5.10

-3.30
P40325

PRPPPRPQ

4.75

-7.76

-5.96

SRPHQRPS

5.09

-6.72

-4.92

PPRPPRPA

6.43

-8.02

-6.22
Q12532

PFKPYING

10.06

-4.56

-2.76
Q04322

QAPLDRPQ

7.50

-7.27

-5.47

PTLPPRRI

8.03

-8.23

-6.43

NATPSKSP

8.27

-3.23

-1.43
P38266

SITPPRPP

6.31

-6.88

-5.08

PPKPFRRS

6.37

-9.20

-7.40

FLPPPKPF

6.88

-4.81

-3.01
P15891

PPPPPRRA

6.42

-9.69

-7.89

PEKKPKEN

7.18

-5.67

-3.87

PPPPRRAT

7.52

-8.06

-6.26
P53169

PIMPTLPP

7.99

-5.70

-3.90

PTLPPRPY

8.63

-8.90

-7.10

IMPTLPPR

11.10

-3.24

-1.44
Q12344

PKLPPRGK

8.12

-8.23

-6.43

TSTSPKLP

8.70

-2.61

-0.81

TSPKLPPR

9.48

-3.80

-2.00
P40494

KSRPPRPP

5.18

-8.22

-6.42

PRPPPKPL

5.65

-4.77

-2.97

SRPPRPPP

8.50

-4.81

-3.01
P53238

QKPAGRPI

6.64

-7.55

-5.75

GRPIPPAP

9.33

-2.98

-1.18

AGRPIPPA

10.18

-4.51

-2.71
P32660

PTDPNRPK

7.78

-6.24

-4.44

DPNRPKVT

9.03

-4.70

-2.90

PNRPKVTK

10.15

-4.36

-2.56
P38739

SPFHDPIL

10.84

-3.09

-1.29

FHDPILPR

11.02

-3.35

-1.55

PFHDPILP

11.29

-1.17

0.63
Q04749

PVFNPRKP

5.93

-9.02

-7.22

VFNPRKPT

7.74

-3.45

-1.65

PRKPTLST

8.72

-4.66

-2.86
P38090

CSPNDPDL

11.53

-1.72

0.08
P47129

TLPNRKPN

7.09

-4.80

-3.00

RKPNPPPN

8.25

-3.37

-1.57

NRKPNPPP

8.75

-4.05

-2.25
P40453

RKRPPPPP

7.33

-4.60

-2.80

LRKRPPPP

7.73

-5.88

-4.08

WKPPDLPI

8.44

-4.68

-2.88
P40095

PRSPNRPT

6.02

-5.72

-3.92

VLPPPRSP

6.71

-7.58

-5.78

RSPNRPTL

9.51

-3.56

-1.76
Q12168

QHPVPKPN

8.07

-3.71

-1.91

RGPPPLPP

8.09

-4.45

-2.65

PYFPQFRS

8.74

-6.71

-4.91
P32793

PTHPSNMS

11.56

-3.10

-1.30

HGPTHPSN

11.97

-2.77

-0.97
P36123

PKTPPRPK

4.92

-6.80

-5.00

TPPRPKTI

8.08

-4.05

-2.25

LYTTPKTP

8.95

-2.36

-0.56
Q08412

PTQPVRKN

8.38

-8.12

-6.32

NSRPQQPE

9.30

-3.66

-1.86

DVPPQLPT

9.45

-4.63

-2.83
P32855

APTLPKRK

7.99

-4.00

-2.20

NNAPTLPK

10.55

-3.47

-1.67

NAPTLPKR

11.84

-3.37

-1.57
Q06409

PRKTPRPP

5.32

-7.44

-5.64

TGKPRKTP

7.26

-5.64

-3.84

RKTPRPPF

8.15

-3.82

-2.02
P32634

PTEPTRYN

8.79

-7.73

-5.93

QEKIPLEP

9.33

-3.54

-1.74

LPPVPKAP

9.35

-3.71

-1.91
P53118

ENPHDLPS

9.75

-3.65

-1.85
Q12199

PATPPRHI

6.73

-6.95

-5.15

TTPSVQPT

11.35

-3.51

-1.71

ITTPSVQP

11.41

-2.07

-0.27
P19158

SSMTPVSP

10.15

-4.18

-2.38

EYDPSLPD

11.19

-2.83

-1.03

SSPSSPPS

11.34

-3.02

-1.22
P43638

GRPIPPHP

8.77

-3.44

-1.64

AKGRPIPP

9.52

-3.88

-2.08

KGRPIPPH

10.00

-4.63

-2.83
P53933

RRRPPPPP

6.93

-4.37

-2.57

TRRRPPPP

7.46

-6.26

-4.46

RRPPPPPI

7.67

-4.30

-2.50
P50101

TVFPGSPI

10.70

-3.17

-1.37

VFPGSPID

12.15

-3.08

-1.28
P33400

TSPQILPP

10.03

-4.38

-2.58

STSPQILP

10.54

-2.90

-1.10

ILPPLPVG

11.21

-3.80

-2.00
P38238

QSPTNPPY

11.42

-2.87

-1.07

SPTNPPYK

11.67

-2.87

-1.07

VQSPTNPP

12.25

-1.81

-0.01
Q06116

PELVPRSS

10.00

-8.43

-6.63

GVKPFYPV

10.13

-4.17

-2.37

VKPFYPVT

11.19

-3.25

-1.45
Q08229

PTIPPRSK

10.03

-5.12

-3.32

DYNPTIPP

10.59

-3.02

-1.22

NPTIPPRS

10.72

-3.14

-1.34
P38930

PDMVPKHP

6.59

-5.44

-3.64

QAFPDMVP

9.10

-4.78

-2.98

AFPDMVPK

11.63

-2.79

-0.99
Q12446

PPPPPRRG

6.45

-9.65

-7.85

PPPPHRHV

7.06

-7.60

-5.80

PPPPRRGP

7.59

-7.92

-6.12
P32790

PAMPARPT

4.98

-8.49

-6.69

PIKPPRPT

5.69

-8.28

-6.48

IKPPRPTS

9.73

-4.67

-2.87
P33336

DRNLPSHP

11.84

-1.20

0.60

RNLPSHPS

11.95

-4.51

-2.71

NLPSHPSS

11.96

-3.50

-1.70
P40041

GRTLPPVP

10.63

-2.33

-0.53

KIPLSPPS

11.23

-3.17

-1.37
P50942

PCPPIRRK

5.42

-9.75

-7.95

STKPEKPP

6.96

-4.51

-2.71

RPCPPIRR

8.45

-4.77

-2.97
P47030

ETKPPRAP

6.11

-8.57

-6.77

EAFPPEPS

10.72

-3.10

-1.30

AFPPEPSM

11.26

-3.48

-1.68
P40563

PSERPKRR

6.55

-5.78

-3.98

RAPPPVPK

8.83

-3.39

-1.59

RRAPPPVP

9.23

-3.38

-1.58
P40528

PLPYPIAQ

10.93

-3.53

-1.73

DIPITPSH

11.23

-2.96

-1.16

PITPSHDN

11.42

-3.19

-1.39
Q12134

PVPSPMNS

11.05

-4.05

-2.25

HQPVPSPM

12.26

-2.24

-0.44
P53901

MAMRPIPP

7.01

-6.47

-4.67

MRPIPPLP

9.12

-3.55

-1.75

GLNSPKLP

9.65

-2.95

-1.15
P31374

NISPERPS

7.38

-6.52

-4.72

RKTKPPPP

8.05

-3.55

-1.75

PERPSFRQ

8.50

-6.42

-4.62
P38870

PERPKRKS

5.80

-9.49

-7.69

PTTPERPK

6.28

-6.10

-4.30

TPERPKRK

7.57

-5.84

-4.04
Q07660

SAFKPIGP

8.87

-4.84

-3.04
P53955

NQNDPRSP

9.38

-6.31

-4.51

RNPIPYPI

9.41

-3.02

-1.22

QRNPIPYP

10.81

-2.79

-0.99

 


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