ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-11.PDB
Scoring matrix: LSB3_1OOT-11_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 13.94
Foldx random average score for Saccharomyces cerevisiae: 13.109

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2186473
Proteins after random average filtering: 5078
 Total fragments: 1107851
Proteins after disorder filtering: 3385
 Total fragments: 87751
Proteins after pattern filtering: 1632
 Total fragments: 11577
Proteins after MINT filtering: 50
 Total fragments: 706


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

13.94

-1.68

0.00
Best peptides

FRPKMYR

0.00

-5.63

-3.96
         
Interactors      
Q06604

GPRMPSR

5.19

-8.19

-6.51

KPLLPTR

6.63

-8.71

-7.04

PPPLPTR

6.71

-9.20

-7.52
P09119

TPTTSPV

10.93

-2.15

-0.47

VPLTPTT

11.27

-4.33

-2.66

PTTSPVK

11.64

-3.58

-1.91
P25604

PKPKSPH

8.27

-4.28

-2.61

TPPLPPK

8.53

-4.92

-3.25

APSLPPK

8.67

-6.35

-4.67
P40325

QPPRPPR

4.43

-7.84

-6.17

PWTYPPR

6.18

-7.45

-5.78

QPRPPPR

6.24

-7.31

-5.63
Q04322

SPPLPPR

6.57

-8.02

-6.34

PPTLPPR

6.84

-8.93

-7.25

PTLPPRR

8.43

-6.73

-5.06
P38266

PPPKPFR

4.26

-9.20

-7.52

PRPPPSR

5.60

-7.58

-5.91

PPPPPSR

5.75

-8.34

-6.67
P15891

PPPPPRR

5.62

-7.87

-6.20

APPPPPR

5.66

-7.76

-6.09

QPPLPSR

6.66

-8.86

-7.18
P53169

MPTLPPR

5.61

-8.90

-7.23

TLPPRPY

8.16

-3.77

-2.09

VPIMPTL

8.46

-5.04

-3.37
Q12344

SPPLPPR

6.57

-8.02

-6.34

SPKLPPR

6.92

-8.68

-7.00

PPLPPRQ

9.84

-4.32

-2.65
P40494

PPPKPLH

7.13

-6.75

-5.08

RPPRPPP

7.22

-6.36

-4.69

PPRPPPK

7.86

-6.04

-4.37
P53238

IPPAPTH

8.93

-4.20

-2.53

GRPIPPA

9.41

-3.14

-1.47

PPAPTHY

9.58

-2.68

-1.01
P32660

DPTDPNR

8.02

-6.13

-4.46

HAPMSPF

8.22

-4.04

-2.37

TDPNRPK

8.90

-3.47

-1.80
P38739

HDPILPR

7.04

-6.01

-4.34

SPFHDPI

10.00

-1.15

0.53

SPPNDPS

11.01

-0.54

1.14
Q04749

LPVLPRR

6.83

-8.08

-6.41

NPVFNPR

7.15

-6.45

-4.78

PLPVLPR

8.05

-6.34

-4.67
P38090

SPNDPDL

11.30

-2.71

-1.03

PNDPDLT

13.05

-0.10

1.58
P47129

PPLLPPR

6.64

-9.31

-7.64

PNPPPNR

7.60

-6.85

-5.17

RKPNPPP

9.94

-3.45

-1.78
P40453

PPDLPIR

7.08

-8.23

-6.56

PPPLPPK

8.13

-7.58

-5.91

VPEPPSW

8.33

-4.04

-2.37
P40095

PPRSPNR

6.87

-7.06

-5.38

PVLPPPR

8.13

-7.15

-5.48

SPNRPTL

8.96

-4.58

-2.91
Q12168

PPPVPNR

5.54

-8.35

-6.67

PPPLPPR

6.15

-9.78

-8.10

DPYFPQF

9.09

-4.59

-2.92
P32793

GPTHPSN

11.13

-3.76

-2.09

PTHPSNM

12.37

-2.45

-0.78
P36123

TPKTPPR

6.26

-6.45

-4.78

PDHFPSR

6.71

-7.00

-5.33

RPGNPLY

7.04

-5.35

-3.67
Q08412

LPTQPVR

6.49

-7.46

-5.79

PPQLPTR

7.52

-8.85

-7.17

LPPEPLD

11.25

-2.88

-1.20
P32855

APTLPKR

7.25

-8.42

-6.75

NAPTLPK

11.12

-2.12

-0.45

NPSSSPN

11.73

-2.14

-0.47
Q06409

KPRKTPR

5.89

-8.26

-6.59

RPPFPFF

6.67

-4.84

-3.17

PRNPDPY

7.57

-2.75

-1.08
P32634

VPKAPSR

6.64

-6.50

-4.83

VPTEPTR

7.10

-7.22

-5.54

EPLPPVP

9.76

-3.80

-2.13
P53118

ENPHDLP

10.81

-0.42

1.26

PHDLPSH

11.03

-3.89

-2.21
Q12199

APATPPR

6.02

-7.43

-5.75

PATPPRH

10.92

-3.41

-1.74

NPNNPQC

11.66

-3.43

-1.76
P19158

LPDTPTM

9.65

-4.23

-2.56

MTPVSPL

9.94

-3.37

-1.70

SPSSPPS

11.50

-1.83

-0.16
P43638

GRPIPPH

7.84

-3.52

-1.85

RPIPPHP

9.48

-4.39

-2.71

IPPHPDA

9.59

-3.03

-1.35
P53933

PPPLPNR

6.57

-9.38

-7.71

RPPPPPI

8.45

-5.01

-3.34

RRPPPPP

8.60

-3.84

-2.17
P50101

FPGSPID

10.47

-2.10

-0.43

VFPGSPI

12.05

-0.26

1.42
P33400

PPNAPSY

7.76

-6.55

-4.88

PNAPSYQ

10.61

-1.55

0.13

LPPLPVG

10.76

-5.63

-3.96
P38238

SPTNPPY

7.79

-4.86

-3.19

PTNPPYK

9.34

-4.52

-2.84

DPVQSPT

11.19

-2.80

-1.12
Q06116

PELVPRS

10.05

-3.58

-1.91

SEPVEPF

10.22

-2.44

-0.76

KPFYPVT

10.25

-4.15

-2.48
Q08229

NPTIPPR

5.35

-7.87

-6.20

RPLPSTP

10.27

-2.90

-1.22

TPVQPGG

10.40

-2.20

-0.53
P38930

FPDMVPK

7.99

-4.89

-3.21

PDMVPKH

9.76

-4.32

-2.65

MVPKHPT

11.37

-1.97

-0.29
Q12446

PPPPPRR

5.62

-7.87

-6.20

APPPPPR

5.66

-7.76

-6.09

PPPPPHR

5.91

-8.64

-6.97
P32790

PPIKPPR

4.34

-9.38

-7.71

PPAMPAR

5.00

-9.37

-7.69

MPARPTA

8.22

-5.60

-3.92
P33336

CDPEDYP

9.60

-0.46

1.22

LPSHPSS

10.33

-3.55

-1.87

RNLPSHP

11.60

-2.03

-0.35
P40041

IPLSPPS

10.69

-1.74

-0.06

KIPLSPP

11.03

-4.47

-2.79

PLSPPSS

11.93

-3.18

-1.51
P50942

RPCPPIR

6.01

-7.14

-5.46

KPEKPPV

7.75

-5.70

-4.03

PPPPTSR

8.00

-7.61

-5.94
P47030

FPPEPSM

6.99

-3.90

-2.22

TKPPRAP

11.32

-4.06

-2.38

PPEPSMS

11.43

-3.42

-1.74
P40563

TPNVPTR

6.77

-6.27

-4.59

PSERPKR

6.88

-5.16

-3.49

TPKVPER

7.13

-5.35

-3.67
P40528

IPITPSH

8.49

-4.31

-2.63

PLPYPIA

11.48

-4.08

-2.41

DIPITPS

12.64

-3.22

-1.55
Q12134

QPVPSPM

10.05

-3.69

-2.01

HQPVPSP

10.88

-3.38

-1.70

PVPSPMN

13.05

-3.12

-1.45
P53901

LPPIPTR

5.16

-7.78

-6.11

MRPIPPL

6.36

-4.49

-2.82

RPIPPLP

9.58

-4.01

-2.34
P39743

NPLTSPV

10.49

-2.93

-1.26

TIPEDNP

11.91

-1.51

0.17

PLTSPVA

12.98

-2.59

-0.91
P31374

PERPSFR

6.71

-6.05

-4.38

SPERPSF

7.03

-5.74

-4.07

KPGTPVF

7.95

-5.30

-3.63
P38870

TPERPKR

5.37

-5.01

-3.34

TPTTPER

7.84

-5.75

-4.08

PERPKRK

9.79

-3.66

-1.99
P53955

RNPIPYP

7.98

-3.93

-2.25

NDPRSPL

8.84

-5.43

-3.75

QNDPRSP

11.90

-1.13

0.55

 


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