ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: LSB3_1OOT-1.PDB
Scoring matrix: LSB3_1OOT-1_mat
Uniprot code: P43603
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 22.95
Foldx random average score for Saccharomyces cerevisiae: 19.531

Available information for P43603 in MINT (Nov 2008):
Nš of interacting proteins: 108
 Proteins belonging to other specie: 0
Nš of interactions described: 170
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171239
Proteins after random average filtering: 5078
 Total fragments: 906077
Proteins after disorder filtering: 2990
 Total fragments: 45595
Proteins after pattern filtering: 1492
 Total fragments: 9538
Proteins after MINT filtering: 49
 Total fragments: 567


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

22.95

-2.74

0.00

Best peptides

RRRRRFKRKY

0.00

-5.63

-2.89

         
Interactors      
Q06604

MKNKPKPTPP

9.46

-7.40

-4.66

TMKNKPKPTP

13.51

-7.69

-4.95

EKGPRMPSRG

13.90

-7.42

-4.68

P09119

LNSAQVPLTP

17.84

-6.51

-3.77

P25604

PKPKSPHLKP

10.50

-7.23

-4.49

LKPPLPPPPP

10.63

-8.03

-5.29

PHLKPPLPPP

13.80

-8.72

-5.98

P40325

HQSRPHQRPS

10.21

-7.51

-4.77

SLPWTYPPRF

10.68

-5.53

-2.79

SQPRPPPRPQ

11.41

-8.16

-5.42

Q04322

KNDQAPLDRP

17.11

-8.99

-6.25

DQAPLDRPQL

17.34

-5.25

-2.51

TPPTLPPRRI

17.99

-6.45

-3.71

P38266

IRKRAPTPPA

9.79

-8.53

-5.79

SRSSPKKVPP

10.87

-10.63

-7.89

VRMQPQPPQP

11.19

-8.45

-5.71

P15891

RRATPEKKPK

8.86

-7.00

-4.26

SRSSAAPPPP

11.88

-10.85

-8.11

PRRATPEKKP

11.98

-8.92

-6.18

P53169

IMPTLPPRPY

11.67

-8.85

-6.11

Q12344

PKLPPRGKQR

13.84

-5.41

-2.67

TSPKLPPRGK

16.92

-4.97

-2.23

SPKLPPRGKQ

17.11

-8.32

-5.58

P40494

DKSRPPRPPP

7.64

-7.33

-4.59

SRPPRPPPKP

8.92

-10.78

-8.04

GKDKSRPPRP

10.67

-7.91

-5.17

P53238

QKPAGRPIPP

12.16

-7.27

-4.53

GRPIPPAPTH

12.67

-8.01

-5.27

RPIPPAPTHY

18.27

-7.67

-4.93

P32660

HAPMSPFEDT

16.61

-5.25

-2.51

PMSPFEDTFQ

18.16

-3.64

-0.90

GHAPMSPFED

18.26

-5.32

-2.58

P38739

TLASPFHDPI

13.36

-5.13

-2.39

LASPFHDPIL

17.73

-3.01

-0.27

ASPFHDPILP

17.88

-8.22

-5.48

Q04749

TNPVFNPRKP

14.35

-6.72

-3.98

PLPVLPRRIS

15.52

-7.12

-4.38

FNPRKPTLST

15.62

-7.97

-5.23

P47129

NRKPNPPPNR

11.26

-7.32

-4.58

RKPNPPPNRS

11.77

-8.15

-5.41

TLPNRKPNPP

13.89

-7.30

-4.56

P40453

LRKRPPPPPP

5.09

-12.09

-9.35

IRLRKRPPPP

6.14

-11.31

-8.57

RLRKRPPPPP

9.58

-10.46

-7.72

P40095

NRIPVLPPPR

13.17

-9.52

-6.78

PRSPNRPTLS

14.35

-10.44

-7.70

VLPPPRSPNR

15.05

-4.69

-1.95

Q12168

NRGPPPLPPR

11.18

-6.80

-4.06

NKVQHPVPKP

12.23

-7.70

-4.96

TNRGPPPLPP

15.05

-8.35

-5.61

P32793

GHGPTHPSNM

15.28

-6.34

-3.60

SLGHGPTHPS

18.81

-3.57

-0.83

P36123

SRSQPSDPKL

13.13

-6.47

-3.73

PLYTTPKTPP

13.97

-6.89

-4.15

PKTPPRPKTI

14.40

-4.85

-2.11

Q08412

TKKKWQPLPP

11.23

-7.12

-4.38

KKKWQPLPPE

13.15

-8.08

-5.34

GKNSRPQQPE

13.76

-5.16

-2.42

P32855

LNYSNPSSSP

17.39

-4.97

-2.23

NNAPTLPKRK

18.67

-5.22

-2.48

TNNAPTLPKR

19.37

-5.43

-2.69

Q06409

RKTPRPPFPF

9.51

-7.25

-4.51

PRKTPRPPFP

11.49

-8.99

-6.25

GKPRKTPRPP

12.24

-7.97

-5.23

P32634

EKIPLEPLPP

12.64

-7.42

-4.68

VLNIPLPPQE

14.75

-6.71

-3.97

NLPIVPNPNL

14.75

-5.60

-2.86

P53118

PHDLPSHLGS

18.89

-4.00

-1.26

Q12199

RHICNNPNNP

14.53

-9.04

-6.30

VQPTAAPATP

16.81

-6.43

-3.69

CNNPNNPQCL

17.80

-7.09

-4.35

P19158

QSSMTPVSPL

17.23

-3.62

-0.88

SMTPVSPLGL

17.62

-4.56

-1.82

P43638

GRPIPPHPDA

11.64

-9.79

-7.05

PHPDAPKLPS

16.63

-4.45

-1.71

RPIPPHPDAP

16.79

-7.78

-5.04

P53933

VRTRRRPPPP

5.99

-9.13

-6.39

TRRRPPPPPI

6.21

-11.13

-8.39

RRRPPPPPIP

8.47

-11.87

-9.13

P50101

VFPGSPIDKS

15.91

-6.83

-4.09

SIGTVFPGSP

18.94

-5.34

-2.60

P33400

SHSTSPQILP

15.35

-8.04

-5.30

ILPPLPVGIS

17.54

-5.81

-3.07

PNAPSYQSVQ

17.60

-4.42

-1.68

P38238

VQSPTNPPYK

16.56

-3.52

-0.78

SSSLDPVQSP

19.09

-3.37

-0.63

SLDPVQSPTN

19.46

-3.44

-0.70

Q06116

VKPFYPVTSE

14.05

-5.07

-2.33

NLHSEPVEPF

15.70

-5.70

-2.96

KNLHSEPVEP

16.98

-5.82

-3.08

Q08229

YLTRPLPSTP

12.87

-10.02

-7.28

TRPLPSTPNE

14.72

-3.02

-0.28

YNPTIPPRSK

15.35

-7.83

-5.09

P38930

FPDMVPKHPT

18.50

-7.30

-4.56

QAFPDMVPKH

18.79

-4.16

-1.42

AFPDMVPKHP

19.21

-6.38

-3.64

Q12446

RRGPAPPPPP

8.88

-7.88

-5.14

TKHKAPPPPP

9.99

-8.23

-5.49

VRLPAPPPPP

10.04

-9.63

-6.89

P32790

IKPPRPTSTT

15.89

-6.22

-3.48

LPPIKPPRPT

16.41

-7.50

-4.76

DEEGPPPAMP

17.81

-5.22

-2.48

P33336

DRNLPSHPSS

14.79

-3.65

-0.91

RNLPSHPSSN

15.71

-6.16

-3.42

NLPSHPSSNN

18.09

-4.24

-1.50

P40041

PNGRTLPPVP

15.86

-11.37

-8.63

PLSPPSSSNM

18.39

-4.17

-1.43

P50942

PRPCPPIRRK

11.03

-5.81

-3.07

ERHSTPKPLP

11.40

-13.51

-10.77

AKASTKPEKP

11.89

-6.99

-4.25

P47030

HNANNPLDKP

14.32

-8.82

-6.08

DEAFPPEPSM

18.61

-1.59

1.15

EAFPPEPSMS

18.65

-4.36

-1.62

P40563

PKRRAPPPVP

8.70

-10.11

-7.37

RRAPPPVPKK

9.34

-9.14

-6.40

KRRAPPPVPK

11.21

-11.70

-8.96

P40528

SLNDIPITPS

17.64

-3.79

-1.05

Q12134

THQPVPSPMN

16.18

-6.04

-3.30

HQPVPSPMNS

17.37

-5.42

-2.68

RSTHQPVPSP

18.55

-5.08

-2.34

P53901

MRPIPPLPTE

10.35

-11.36

-8.62

HNYNQPPLPP

14.50

-7.69

-4.95

AMRPIPPLPT

14.55

-7.04

-4.30

P39743

PNATIPEDNP

18.62

-5.19

-2.45

P31374

FRKTKPPPPL

10.67

-8.80

-6.06

RKTKPPPPLD

11.02

-8.59

-5.85

SFRKTKPPPP

13.92

-6.72

-3.98

P38870

IHSTPKPPPN

15.07

-4.57

-1.83

TPTTPERPKR

16.45

-6.49

-3.75

PKPPPNDKDG

16.95

-4.16

-1.42

P53955

RNPIPYPIDA

13.21

-8.93

-6.19

QRNPIPYPID

13.55

-6.55

-3.81

LAQRNPIPYP

13.79

-8.74

-6.00

 


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