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Matrix information:
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ADAN-name: LSB1_1CKB-8.PDB
Scoring matrix: LSB1_1CKB-8_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.76
Foldx random average score for Saccharomyces cerevisiae: 12.750 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214487
Proteins after random average filtering: 7178
Total fragments: 1350334
Proteins after disorder filtering: 4508
Total fragments: 82958
Proteins after pattern filtering: 2281
Total fragments: 16036
Proteins after MINT filtering: 28
Total fragments: 581
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
14.76
|
-1.62 |
0.00 |
| Best peptides |
RRPPLQPF |
0.00
|
-4.36 |
-2.74 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
SPPPLPTR |
6.12
|
-8.39 |
-6.77 |
|
EKPLLPTR |
6.23
|
-7.43 |
-5.81 |
|
PRMPSRGR |
7.07
|
-4.74 |
-3.12 |
| P53120 |
YEPECPVA |
10.42
|
-4.55 |
-2.93 |
|
SYEPECPV |
11.35
|
-2.29 |
-0.67 |
| Q04322 |
TPPTLPPR |
6.08
|
-8.72 |
-7.10 |
|
TSPPLPPR |
7.29
|
-6.68 |
-5.06 |
|
APLDRPQL |
8.50
|
-5.73 |
-4.11 |
| Q12168 |
GPPPLPPR |
5.33
|
-8.59 |
-6.97 |
|
IPPPVPNR |
7.63
|
-8.09 |
-6.47 |
|
DDPYFPQF |
8.64
|
-8.26 |
-6.64 |
| P53169 |
IMPTLPPR |
5.41
|
-8.87 |
-7.25 |
|
SVPIMPTL |
7.54
|
-6.41 |
-4.79 |
|
PTLPPRPY |
10.51
|
-3.61 |
-1.99 |
| Q12344 |
SSPPLPPR |
7.27
|
-7.47 |
-5.85 |
|
TSPKLPPR |
8.52
|
-7.55 |
-5.93 |
|
PKLPPRGK |
8.60
|
-5.22 |
-3.60 |
| Q07533 |
MNNPLPPL |
6.68
|
-5.96 |
-4.34 |
|
PLPPLPPL |
7.94
|
-6.65 |
-5.03 |
|
PLPPLPDL |
8.58
|
-7.24 |
-5.62 |
| P53238 |
GRPIPPAP |
5.76
|
-5.80 |
-4.18 |
|
QKPAGRPI |
8.56
|
-4.53 |
-2.91 |
|
AGRPIPPA |
9.10
|
-5.21 |
-3.59 |
| P08417 |
LMLPENEP |
10.70
|
-3.01 |
-1.39 |
| P39521 |
QPKPKPAQ |
8.38
|
-4.44 |
-2.82 |
|
HVPDRPPS |
9.59
|
-4.72 |
-3.10 |
|
DAQPKPKP |
10.39
|
-4.09 |
-2.47 |
| P04050 |
PPPVRPSI |
6.98
|
-6.78 |
-5.16 |
|
EAPTSPGF |
7.66
|
-5.82 |
-4.20 |
|
PPPPVRPS |
8.60
|
-5.79 |
-4.17 |
| P40453 |
KRPPPPPP |
5.04
|
-7.85 |
-6.23 |
|
IPPPLPPK |
5.21
|
-9.77 |
-8.15 |
|
KPPDLPIR |
7.16
|
-8.62 |
-7.00 |
| P19812 |
EPRPRRIP |
7.35
|
-5.17 |
-3.55 |
|
PRPRRIPP |
7.70
|
-3.30 |
-1.68 |
|
RPRRIPPT |
8.12
|
-7.12 |
-5.50 |
| Q03780 |
SRPPPPPM |
4.19
|
-7.61 |
-5.99 |
|
KRSRPPPP |
8.28
|
-5.30 |
-3.68 |
|
PRSPNRNA |
8.41
|
-3.70 |
-2.08 |
| P48582 |
PAPPLPPL |
5.79
|
-7.97 |
-6.35 |
|
AAPPVPPK |
7.61
|
-6.81 |
-5.19 |
|
NRNTPPQP |
7.62
|
-3.93 |
-2.31 |
| P53933 |
RRPPPPPI |
4.46
|
-7.16 |
-5.54 |
|
RRRPPPPP |
5.43
|
-6.93 |
-5.31 |
|
APPPLPNR |
5.85
|
-8.87 |
-7.25 |
| Q08229 |
YNPTIPPR |
7.39
|
-5.99 |
-4.37 |
|
TRPLPSTP |
7.76
|
-3.58 |
-1.96 |
|
DYNPTIPP |
10.33
|
-4.95 |
-3.33 |
| P33338 |
ARTPTPTP |
9.39
|
-4.51 |
-2.89 |
|
ARTPARTP |
10.36
|
-3.98 |
-2.36 |
|
RTPARTPT |
10.79
|
-0.87 |
0.75 |
| P32893 |
GTIPNSPL |
11.63
|
0.12 |
1.74 |
| Q12446 |
NRPVPPPP |
5.90
|
-6.54 |
-4.92 |
|
APPPPPAF |
6.20
|
-8.44 |
-6.82 |
|
VRLPAPPP |
6.77
|
-6.00 |
-4.38 |
| P40483 |
SKPSVPPR |
7.03
|
-7.52 |
-5.90 |
|
APASKPSV |
9.92
|
-4.58 |
-2.96 |
|
KPSVPPRN |
11.00
|
-3.75 |
-2.13 |
| P39940 |
PRLPSSLD |
9.10
|
-2.53 |
-0.91 |
|
DPRLPSSL |
9.90
|
-3.41 |
-1.79 |
|
DDPRLPSS |
9.98
|
-7.69 |
-6.07 |
| P38266 |
IMPPPKPF |
5.94
|
-6.92 |
-5.30 |
|
IYPIEPSL |
6.29
|
-5.06 |
-3.44 |
|
AVPILPPR |
6.64
|
-6.05 |
-4.43 |
| Q04659 |
KDPTVPNG |
11.12
|
-4.65 |
-3.03 |
|
QKDPTVPN |
12.57
|
-3.56 |
-1.94 |
| P40563 |
APPPVPKK |
7.14
|
-8.12 |
-6.50 |
|
RRAPPPVP |
7.65
|
-5.79 |
-4.17 |
|
PPPVPKKP |
9.68
|
-6.71 |
-5.09 |
| P00812 |
DPLYIPAT |
8.56
|
-4.52 |
-2.90 |
|
GVDPLYIP |
10.81
|
-4.14 |
-2.52 |
|
PHCPESLK |
11.48
|
-3.01 |
-1.39 |
| Q04195 |
STPVLPTL |
7.50
|
-5.59 |
-3.97 |
|
NEPIQFPF |
7.53
|
-1.00 |
0.62 |
|
SHPSEPII |
9.37
|
-4.75 |
-3.13 |
| P43582 |
PRPKGPPP |
7.48
|
-6.30 |
-4.68 |
|
TWPRPKGP |
8.60
|
-3.65 |
-2.03 |
|
WPRPKGPP |
10.26
|
-4.62 |
-3.00 |
|
