|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-26.PDB
Scoring matrix: LSB1_1CKB-26_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 13.18
Foldx random average score for Saccharomyces cerevisiae: 9.771 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3207309
Proteins after random average filtering: 7177
Total fragments: 1351731
Proteins after disorder filtering: 4177
Total fragments: 62054
Proteins after pattern filtering: 2200
Total fragments: 17042
Proteins after MINT filtering: 27
Total fragments: 623
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
13.18
|
-2.40 |
0.00 |
| Best peptides |
SRYPRKRPF |
0.00
|
-5.55 |
-3.15 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
SSPPPLPTR |
4.70
|
-8.53 |
-6.13 |
|
EEKPLLPTR |
4.90
|
-7.86 |
-5.46 |
|
PSPPAKRIP |
5.24
|
-8.06 |
-5.66 |
| P53120 |
SYEPECPVA |
8.97
|
-5.16 |
-2.76 |
|
YEPECPVAY |
9.63
|
-5.02 |
-2.62 |
| Q04322 |
STPPTLPPR |
4.55
|
-7.40 |
-5.00 |
|
TSPPLPPRA |
5.72
|
-8.04 |
-5.64 |
|
SPPLPPRAD |
6.35
|
-6.74 |
-4.34 |
| Q12168 |
RGPPPLPPR |
4.54
|
-7.74 |
-5.34 |
|
DPYFPQFRS |
6.22
|
-8.70 |
-6.30 |
|
NDDPYFPQF |
6.46
|
-6.52 |
-4.12 |
| P53169 |
NSVPIMPTL |
5.45
|
-6.76 |
-4.36 |
|
MPTLPPRPY |
5.72
|
-5.11 |
-2.71 |
|
PIMPTLPPR |
5.91
|
-6.68 |
-4.28 |
| Q12344 |
SPKLPPRGK |
4.39
|
-5.46 |
-3.06 |
|
SSPPLPPRQ |
4.55
|
-7.31 |
-4.91 |
|
SPPLPPRQN |
6.20
|
-6.43 |
-4.03 |
| Q07533 |
SSMPNSPKK |
6.38
|
-6.45 |
-4.05 |
|
SDPHFPYGT |
6.41
|
-3.52 |
-1.12 |
|
KSPKAYPKL |
6.42
|
-6.28 |
-3.88 |
| P53238 |
RPIPPAPTH |
5.12
|
-6.06 |
-3.66 |
|
AGRPIPPAP |
6.62
|
-7.12 |
-4.72 |
|
KPAGRPIPP |
8.62
|
-5.36 |
-2.96 |
| P08417 |
ELMLPENEP |
9.05
|
-5.57 |
-3.17 |
|
MLPENEPGS |
9.12
|
-5.83 |
-3.43 |
| P39521 |
AQPKPKPAQ |
5.79
|
-7.30 |
-4.90 |
|
PHVPDRPPS |
6.81
|
-7.00 |
-4.60 |
|
HVPDRPPSQ |
6.87
|
-5.31 |
-2.91 |
| P04050 |
VPPPPVRPS |
5.51
|
-8.60 |
-6.20 |
|
PPPPVRPSI |
5.81
|
-7.44 |
-5.04 |
|
LPVPPPPVR |
6.02
|
-6.76 |
-4.36 |
| P40453 |
EIPPPLPPK |
4.38
|
-8.53 |
-6.13 |
|
TKVPEPPSW |
4.91
|
-6.51 |
-4.11 |
|
RKRPPPPPP |
5.03
|
-7.80 |
-5.40 |
| P19812 |
EPRPRRIPP |
4.35
|
-8.13 |
-5.73 |
|
PRPRRIPPT |
6.58
|
-7.69 |
-5.29 |
|
DAPQNPPPI |
7.13
|
-6.68 |
-4.28 |
| Q03780 |
RSRPPPPPM |
3.43
|
-7.84 |
-5.44 |
|
RPPPPPMDM |
4.93
|
-8.23 |
-5.83 |
|
TSAPDIPPR |
5.41
|
-7.49 |
-5.09 |
| P48582 |
SPAPPLPPL |
5.25
|
-6.61 |
-4.21 |
|
AAPPVPPKQ |
5.96
|
-7.22 |
-4.82 |
|
PPVPPKQSQ |
5.98
|
-5.05 |
-2.65 |
| P53933 |
RRRPPPPPI |
4.36
|
-6.82 |
-4.42 |
|
RPPPPPIPS |
5.71
|
-7.63 |
-5.23 |
|
RRPPPPPIP |
5.81
|
-8.24 |
-5.84 |
| Q08229 |
DYNPTIPPR |
6.60
|
-7.33 |
-4.93 |
|
NPTIPPRSK |
6.87
|
-5.72 |
-3.32 |
|
LPTPVQPGG |
8.04
|
-6.10 |
-3.70 |
| P33338 |
TPTPTPPVV |
7.90
|
-5.57 |
-3.17 |
|
VTPARTPAR |
8.48
|
-6.27 |
-3.87 |
|
RTPARTPTP |
8.71
|
-6.44 |
-4.04 |
| P43582 |
SNPPQVPSG |
6.49
|
-8.43 |
-6.03 |
|
TTWPRPKGP |
6.81
|
-6.57 |
-4.17 |
|
WPRPKGPPP |
7.49
|
-6.60 |
-4.20 |
| P40483 |
ASKPSVPPR |
5.51
|
-7.34 |
-4.94 |
|
PSVPPRNYF |
5.80
|
-6.71 |
-4.31 |
|
SKPSVPPRN |
7.51
|
-5.30 |
-2.90 |
| P39940 |
TTWDDPRLP |
7.34
|
-5.19 |
-2.79 |
|
DDPRLPSSL |
8.75
|
-5.00 |
-2.60 |
|
WDDPRLPSS |
8.85
|
-5.76 |
-3.36 |
| P38266 |
MPPPKPFRH |
3.22
|
-8.59 |
-6.19 |
|
LPPPKPFRH |
3.67
|
-8.41 |
-6.01 |
|
QPPPKPFRR |
4.31
|
-8.10 |
-5.70 |
| Q04659 |
KDPTVPNGL |
8.69
|
-4.90 |
-2.50 |
|
QKDPTVPNG |
9.41
|
-5.69 |
-3.29 |
| P40563 |
RAPPPVPKK |
5.19
|
-7.85 |
-5.45 |
|
RRAPPPVPK |
6.40
|
-7.10 |
-4.70 |
|
EVTPKVPER |
6.54
|
-5.60 |
-3.20 |
| P00812 |
KDVPHCPES |
7.09
|
-6.29 |
-3.89 |
|
VDPLYIPAT |
7.11
|
-6.14 |
-3.74 |
|
PHCPESLKW |
7.88
|
-5.25 |
-2.85 |
| Q04195 |
GNEPIQFPF |
5.12
|
-6.62 |
-4.22 |
|
SSHPSEPII |
6.58
|
-5.63 |
-3.23 |
|
TPVLPTLPQ |
6.92
|
-5.45 |
-3.05 |
| Q12446 |
RPVPPPPPM |
3.79
|
-7.00 |
-4.60 |
|
AAPPPPPAF |
4.30
|
-7.54 |
-5.14 |
|
APPPPPHRH |
4.46
|
-5.85 |
-3.45 |
|
