|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-23.PDB
Scoring matrix: LSB1_1CKB-23_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 11.38
Foldx random average score for Saccharomyces cerevisiae: 9.711 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3221665
Proteins after random average filtering: 7178
Total fragments: 1824553
Proteins after disorder filtering: 4925
Total fragments: 113466
Proteins after pattern filtering: 2214
Total fragments: 12872
Proteins after MINT filtering: 28
Total fragments: 500
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
11.38
|
-2.20 |
0.00 |
| Best peptides |
MPLMYWY |
0.00
|
-5.55 |
-3.35 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
KPLLPTR |
3.28
|
-5.96 |
-3.76 |
|
KPKPTPP |
5.04
|
-6.76 |
-4.56 |
|
KPTPPSP |
5.40
|
-5.81 |
-3.61 |
| P53120 |
PECPVAY |
9.48
|
-5.15 |
-2.95 |
| Q04322 |
SPPLPPR |
5.83
|
-3.62 |
-1.42 |
|
QAPLDRP |
6.38
|
-3.93 |
-1.73 |
|
PTLPPRR |
6.42
|
-7.86 |
-5.66 |
| Q12168 |
RGPPPLP |
6.21
|
-6.36 |
-4.16 |
|
HPVPKPN |
6.50
|
-4.91 |
-2.71 |
|
NDDPYFP |
6.93
|
-6.76 |
-4.56 |
| P53169 |
MPTLPPR |
3.09
|
-6.12 |
-3.92 |
|
VPIMPTL |
4.08
|
-6.98 |
-4.78 |
|
TLPPRPY |
5.97
|
-5.47 |
-3.27 |
| Q12344 |
SPKLPPR |
4.37
|
-5.45 |
-3.25 |
|
SPPLPPR |
5.83
|
-3.62 |
-1.42 |
|
TSSPPLP |
5.83
|
-5.54 |
-3.34 |
| Q07533 |
NPLPPLP |
3.74
|
-9.31 |
-7.11 |
|
LPPLPPL |
4.90
|
-5.69 |
-3.49 |
|
LPPLPDL |
5.36
|
-4.91 |
-2.71 |
| P53238 |
RPIPPAP |
5.11
|
-6.84 |
-4.64 |
|
AGRPIPP |
7.77
|
-6.07 |
-3.87 |
|
QKPAGRP |
7.82
|
-5.04 |
-2.84 |
| P08417 |
MLPENEP |
8.71
|
-3.55 |
-1.35 |
| P39521 |
QPKPKPA |
6.36
|
-5.59 |
-3.39 |
|
AQPKPKP |
7.44
|
-3.67 |
-1.47 |
|
VQTPHVP |
8.56
|
-3.77 |
-1.57 |
| P04050 |
LPVPPPP |
6.02
|
-6.89 |
-4.69 |
|
TCLPVPP |
6.28
|
-6.89 |
-4.69 |
|
VPPPPVR |
6.64
|
-5.21 |
-3.01 |
| P40453 |
RKRPPPP |
5.93
|
-7.84 |
-5.64 |
|
WKPPDLP |
5.97
|
-5.77 |
-3.57 |
|
PPLPPKI |
5.97
|
-6.72 |
-4.52 |
| P19812 |
RPRRIPP |
6.28
|
-6.99 |
-4.79 |
|
APQNPPP |
8.32
|
-4.17 |
-1.97 |
|
DAPQNPP |
8.43
|
-2.42 |
-0.22 |
| Q03780 |
RPPPPPM |
5.26
|
-6.10 |
-3.90 |
|
RSRPPPP |
6.27
|
-7.69 |
-5.49 |
|
DIPPRSP |
7.13
|
-3.90 |
-1.70 |
| P48582 |
APPLPPL |
5.76
|
-3.70 |
-1.50 |
|
SDLPQGP |
6.77
|
-5.75 |
-3.55 |
|
RNTPPQP |
6.78
|
-5.16 |
-2.96 |
| P53933 |
DLPMELP |
5.63
|
-4.45 |
-2.25 |
|
RRRPPPP |
5.83
|
-7.61 |
-5.41 |
|
RPPPPPI |
5.94
|
-5.75 |
-3.55 |
| Q08229 |
RPLPSTP |
5.46
|
-7.36 |
-5.16 |
|
LPTPVQP |
6.60
|
-6.10 |
-3.90 |
|
DYNPTIP |
7.89
|
-4.83 |
-2.63 |
| P33338 |
TPTPTPP |
6.32
|
-5.14 |
-2.94 |
|
TPTPPVV |
6.94
|
-4.76 |
-2.56 |
|
SGPLTPP |
7.56
|
-3.28 |
-1.08 |
| P32893 |
GTIPNSP |
7.62
|
-4.38 |
-2.18 |
|
TIPNSPL |
8.56
|
-3.11 |
-0.91 |
| Q12446 |
HSLPPLP |
3.79
|
-7.44 |
-5.24 |
|
RPLPQLP |
4.18
|
-8.13 |
-5.93 |
|
VRLPAPP |
5.11
|
-7.25 |
-5.05 |
| P40483 |
KPSVPPR |
7.36
|
-5.87 |
-3.67 |
|
DAPASKP |
7.50
|
-3.60 |
-1.40 |
|
ASKPSVP |
7.54
|
-5.66 |
-3.46 |
| P39940 |
DPRLPSS |
6.08
|
-4.10 |
-1.90 |
|
WDDPRLP |
6.61
|
-5.07 |
-2.87 |
|
PRLPSSL |
7.19
|
-6.30 |
-4.10 |
| P38266 |
VPILPPR |
3.52
|
-6.53 |
-4.33 |
|
QPLPPPR |
4.18
|
-7.27 |
-5.07 |
|
MPPPKPF |
4.63
|
-5.41 |
-3.21 |
| Q04659 |
KDPTVPN |
9.27
|
-3.14 |
-0.94 |
|
QKDPTVP |
9.28
|
-2.86 |
-0.66 |
|
DPTVPNG |
9.64
|
-4.23 |
-2.03 |
| P40563 |
APPPVPK |
7.31
|
-4.85 |
-2.65 |
|
RAPPPVP |
7.50
|
-5.60 |
-3.40 |
|
TPKVPER |
7.65
|
-6.47 |
-4.27 |
| P00812 |
VDPLYIP |
5.61
|
-3.16 |
-0.96 |
|
KDVPHCP |
7.92
|
-5.12 |
-2.92 |
|
DPLYIPA |
8.47
|
-3.49 |
-1.29 |
| Q04195 |
TPVLPTL |
5.50
|
-4.12 |
-1.92 |
|
LPTLPQN |
6.00
|
-5.37 |
-3.17 |
|
NSTPVLP |
6.02
|
-7.63 |
-5.43 |
| P43582 |
WPRPKGP |
5.82
|
-6.88 |
-4.68 |
|
RPKGPPP |
6.30
|
-5.84 |
-3.64 |
|
NPPQVPS |
9.05
|
-4.72 |
-2.52 |
|
