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Matrix information:
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ADAN-name: LSB1_1CKB-21.PDB
Scoring matrix: LSB1_1CKB-21_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 15.6
Foldx random average score for Saccharomyces cerevisiae: 16.625 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3200131
Proteins after random average filtering: 7178
Total fragments: 2070947
Proteins after disorder filtering: 4553
Total fragments: 93453
Proteins after pattern filtering: 1798
Total fragments: 4939
Proteins after MINT filtering: 25
Total fragments: 119
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
15.60
|
-0.34 |
0.00 |
| Best peptides |
HNRLGHPHRK |
0.00
|
-1.28 |
-0.94 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
EKGPRMPSRG |
11.22
|
-4.12 |
-3.78 |
|
SPPPLPTRRD |
11.94
|
-4.42 |
-4.08 |
|
KGPRMPSRGR |
13.92
|
-1.98 |
-1.64 |
| P53120 |
SYEPECPVAY |
14.98
|
-2.99 |
-2.65 |
| Q04322 |
TPPTLPPRRI |
14.33
|
-4.61 |
-4.27 |
| Q12168 |
PNRPGGTTNR |
12.31
|
-5.18 |
-4.84 |
|
DDPYFPQFRS |
13.40
|
-3.41 |
-3.07 |
|
GPPPLPPRAN |
13.81
|
-1.99 |
-1.65 |
| Q12344 |
TSPKLPPRGK |
15.16
|
-2.54 |
-2.20 |
|
SSPPLPPRQN |
15.16
|
-1.71 |
-1.37 |
| Q07533 |
KSDPHFPYGT |
11.44
|
2.77 |
3.11 |
|
PPLPDLDNMR |
12.51
|
-4.25 |
-3.91 |
|
VSSPKSPKAY |
12.72
|
-0.93 |
-0.59 |
| P53238 |
PIPPAPTHYN |
16.59
|
-2.58 |
-2.24 |
| P08417 |
LPENEPGSSI |
15.21
|
-0.51 |
-0.17 |
|
MLPENEPGSS |
15.84
|
-1.93 |
-1.59 |
| P39521 |
QPKPKPAQDN |
15.21
|
-1.12 |
-0.78 |
| P04050 |
GYSPGSPAYS |
14.68
|
-2.39 |
-2.05 |
|
PPPPVRPSIS |
15.87
|
-2.80 |
-2.46 |
|
SYSPTSPNYS |
15.87
|
-1.51 |
-1.17 |
| P40453 |
WKPPDLPIRL |
12.88
|
-4.34 |
-4.00 |
|
KPPDLPIRLR |
12.96
|
-5.24 |
-4.90 |
|
PDLPIRLRKR |
13.66
|
-3.55 |
-3.21 |
| P19812 |
SPIFRPGNIF |
11.82
|
-3.74 |
-3.40 |
|
HSPIFRPGNI |
12.10
|
-2.98 |
-2.64 |
|
NSPEASPSLA |
12.67
|
-2.29 |
-1.95 |
| Q03780 |
DIPPRSPNRN |
10.21
|
-4.47 |
-4.13 |
|
IPPRSPNRNA |
14.65
|
-4.69 |
-4.35 |
| P48582 |
QGPGIPPRTY |
15.70
|
-0.76 |
-0.42 |
|
RNTPPQPSLL |
16.19
|
-5.34 |
-5.00 |
| P53933 |
VSYPGNPTSR |
11.62
|
-2.04 |
-1.70 |
|
APPPLPNRQL |
15.49
|
-1.68 |
-1.34 |
|
VAPPPLPNRQ |
16.06
|
-4.03 |
-3.69 |
| Q08229 |
YNPTIPPRSK |
14.07
|
-3.96 |
-3.62 |
|
PSTPNEDSRV |
14.13
|
-3.15 |
-2.81 |
|
PVQPGGHYKN |
14.52
|
-1.01 |
-0.67 |
| P33338 |
VTPARTPART |
12.06
|
-3.82 |
-3.48 |
| P43582 |
SNPPQVPSGW |
12.07
|
-2.14 |
-1.80 |
| P39940 |
WDDPRLPSSL |
15.18
|
-0.54 |
-0.20 |
|
DDPRLPSSLD |
16.14
|
-4.00 |
-3.66 |
| P38266 |
QPPPKPFRRS |
10.76
|
-3.65 |
-3.31 |
|
KKPPVVPKKK |
11.00
|
-3.70 |
-3.36 |
|
KVPPVVPKKN |
12.75
|
-3.27 |
-2.93 |
| Q04659 |
QKDPTVPNGL |
13.47
|
-2.75 |
-2.41 |
| P40563 |
NPGQLPPSLE |
13.39
|
-2.95 |
-2.61 |
|
NSQPQGPSDT |
13.51
|
-1.30 |
-0.96 |
| P00812 |
VDPLYIPATG |
13.31
|
-2.50 |
-2.16 |
|
DVPHCPESLK |
14.34
|
-2.57 |
-2.23 |
|
KDVPHCPESL |
14.60
|
-0.79 |
-0.45 |
| Q04195 |
SSHPSEPIII |
12.48
|
-2.94 |
-2.60 |
|
LPQNVPIRTN |
13.48
|
-0.73 |
-0.39 |
|
NSVPNPPNTA |
13.87
|
-0.57 |
-0.23 |
| Q12446 |
RPLPQLPNRN |
10.42
|
-3.60 |
-3.26 |
|
LPPASPEVRK |
11.69
|
-4.11 |
-3.77 |
|
NNAPSQPQSN |
12.07
|
-2.72 |
-2.38 |
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