|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-20.PDB
Scoring matrix: LSB1_1CKB-20_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.66
Foldx random average score for Saccharomyces cerevisiae: 16.539 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3207309
Proteins after random average filtering: 7178
Total fragments: 1362787
Proteins after disorder filtering: 4512
Total fragments: 67584
Proteins after pattern filtering: 1894
Total fragments: 6433
Proteins after MINT filtering: 26
Total fragments: 205
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
16.66
|
-2.04 |
0.00 |
| Best peptides |
RPKFRGFHI |
0.00
|
-7.69 |
-5.65 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
EKGPRMPSR |
12.08
|
-6.59 |
-4.55 |
|
PAPPVSRST |
13.10
|
-5.20 |
-3.16 |
|
GPRMPSRGR |
13.27
|
-9.52 |
-7.48 |
| P53120 |
RSYEPECPV |
16.23
|
-5.39 |
-3.35 |
| Q12168 |
DPYFPQFRS |
12.77
|
-7.11 |
-5.07 |
|
VPNRPGGTT |
14.10
|
-8.27 |
-6.23 |
|
NDDPYFPQF |
14.65
|
-6.50 |
-4.46 |
| P53169 |
SPAQPSASL |
12.92
|
-7.65 |
-5.61 |
|
NSVPIMPTL |
13.76
|
-6.22 |
-4.18 |
| Q12344 |
PLPPRQNVA |
16.15
|
-6.10 |
-4.06 |
|
PKLPPRGKQ |
16.49
|
-8.73 |
-6.69 |
| Q03780 |
DIPPRSPNR |
13.50
|
-6.87 |
-4.83 |
|
PPPPMDMKS |
13.79
|
-7.92 |
-5.88 |
|
PPPPPMDMK |
15.73
|
-9.17 |
-7.13 |
| P53238 |
RPIPPAPTH |
12.64
|
-10.75 |
-8.71 |
|
PPAPTHYNN |
16.00
|
-7.33 |
-5.29 |
| P08417 |
PENEPGSSI |
13.96
|
-6.44 |
-4.40 |
|
MLPENEPGS |
16.02
|
-3.32 |
-1.28 |
| P39521 |
TPHVPDRPP |
15.34
|
-8.35 |
-6.31 |
|
AQPKPKPAQ |
16.48
|
-5.84 |
-3.80 |
| P04050 |
PPPPVRPSI |
12.55
|
-8.52 |
-6.48 |
|
NYSPTSPSY |
12.64
|
-5.21 |
-3.17 |
|
PPVRPSISF |
12.68
|
-9.30 |
-7.26 |
| P40453 |
VPEPPSWKP |
13.52
|
-9.74 |
-7.70 |
|
WDCPRCGPT |
14.19
|
-6.45 |
-4.41 |
|
PDLPIRLRK |
14.75
|
-5.35 |
-3.31 |
| P19812 |
NSPEASPSL |
12.84
|
-4.79 |
-2.75 |
|
HSPIFRPGN |
14.55
|
-4.14 |
-2.10 |
|
EPRPRRIPP |
14.99
|
-8.92 |
-6.88 |
| P40483 |
KDAPASKPS |
15.54
|
-4.29 |
-2.25 |
| P48582 |
RNTPPQPSL |
12.19
|
-9.65 |
-7.61 |
|
SDLPQGPGI |
13.84
|
-5.28 |
-3.24 |
|
TPPQPSLLD |
14.68
|
-8.19 |
-6.15 |
| Q07533 |
PHFPYGTWK |
11.93
|
-6.39 |
-4.35 |
|
KSPKAYPKL |
12.16
|
-6.47 |
-4.43 |
|
IPPVPSRYS |
13.26
|
-7.57 |
-5.53 |
| P53933 |
NDLPMELPH |
15.43
|
-4.86 |
-2.82 |
|
PPPIPSTQK |
15.56
|
-6.17 |
-4.13 |
| Q08229 |
TPVQPGGHY |
10.90
|
-9.01 |
-6.97 |
|
PVQPGGHYK |
13.80
|
-5.87 |
-3.83 |
|
RPLPSTPNE |
15.76
|
-8.31 |
-6.27 |
| P33338 |
RTPARTPTP |
13.88
|
-8.61 |
-6.57 |
|
VTPARTPAR |
16.22
|
-5.81 |
-3.77 |
| P43582 |
WPRPKGPPP |
12.79
|
-9.74 |
-7.70 |
| P39940 |
WDDPRLPSS |
11.15
|
-7.16 |
-5.12 |
|
PRLPSSLDQ |
15.69
|
-3.86 |
-1.82 |
| P38266 |
PPKPFRRSQ |
11.46
|
-8.96 |
-6.92 |
|
NIYPIEPSL |
11.76
|
-6.10 |
-4.06 |
|
PPPKPFRHT |
11.80
|
-8.14 |
-6.10 |
| Q04659 |
PTVPNGLDG |
15.85
|
-3.85 |
-1.81 |
| P40563 |
NSQPQGPSD |
13.15
|
-6.26 |
-4.22 |
|
RAPPPVPKK |
14.60
|
-9.14 |
-7.10 |
|
PSERPKRRA |
15.95
|
-6.58 |
-4.54 |
| P00812 |
PHCPESLKW |
14.78
|
-6.00 |
-3.96 |
|
VPHCPESLK |
15.61
|
-5.56 |
-3.52 |
| Q04195 |
NSTPVLPTL |
14.59
|
-5.55 |
-3.51 |
|
NEPIQFPFP |
15.29
|
-5.47 |
-3.43 |
|
GNEPIQFPF |
15.37
|
-6.30 |
-4.26 |
| Q12446 |
PPPRRGPAP |
11.70
|
-9.21 |
-7.17 |
|
RPLPQLPNR |
12.76
|
-8.42 |
-6.38 |
|
PPPPPHRHV |
13.08
|
-9.30 |
-7.26 |
|
