|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-17.PDB
Scoring matrix: LSB1_1CKB-17_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.19
Foldx random average score for Saccharomyces cerevisiae: 17.644 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3207309
Proteins after random average filtering: 7178
Total fragments: 1329985
Proteins after disorder filtering: 4481
Total fragments: 60905
Proteins after pattern filtering: 1920
Total fragments: 6547
Proteins after MINT filtering: 27
Total fragments: 204
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
18.19
|
-3.34 |
0.00 |
| Best peptides |
RRYIWGWSL |
0.00
|
-8.64 |
-5.31 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
GPRMPSRGR |
13.91
|
-5.41 |
-2.08 |
|
YSNIPSSKP |
14.96
|
-8.29 |
-4.95 |
|
PAPPVSRST |
15.23
|
-6.11 |
-2.78 |
| P53120 |
RSYEPECPV |
15.02
|
-4.14 |
-0.80 |
| Q04322 |
GNATPSKSP |
16.54
|
-5.52 |
-2.18 |
| P19812 |
NSPEASPSL |
14.78
|
-4.04 |
-0.71 |
|
HSPIFRPGN |
15.33
|
-4.80 |
-1.46 |
|
PRPRRIPPT |
17.63
|
-7.61 |
-4.28 |
| P53169 |
SPAQPSASL |
15.09
|
-6.12 |
-2.79 |
|
NSVPIMPTL |
15.52
|
-6.42 |
-3.09 |
|
VPIMPTLPP |
15.87
|
-7.48 |
-4.15 |
| Q12344 |
PPLPPRQNV |
16.15
|
-7.45 |
-4.12 |
|
PKLPPRGKQ |
16.32
|
-6.27 |
-2.93 |
| P00812 |
PHCPESLKW |
15.83
|
-7.11 |
-3.78 |
|
VPHCPESLK |
16.48
|
-6.00 |
-2.67 |
|
NKDVPHCPE |
16.89
|
-4.24 |
-0.91 |
| P53238 |
RPIPPAPTH |
11.07
|
-10.99 |
-7.66 |
|
IPPAPTHYN |
16.62
|
-6.79 |
-3.46 |
|
PPAPTHYNN |
16.91
|
-7.74 |
-4.41 |
| P08417 |
PENEPGSSI |
14.04
|
-5.79 |
-2.46 |
| P39521 |
TPHVPDRPP |
15.37
|
-8.04 |
-4.70 |
| P04050 |
PPPPVRPSI |
12.50
|
-9.15 |
-5.82 |
|
PPVRPSISF |
13.15
|
-7.79 |
-4.46 |
|
SPTSPGYSP |
14.64
|
-6.55 |
-3.21 |
| P40453 |
VPEPPSWKP |
15.22
|
-8.27 |
-4.93 |
|
PDLPIRLRK |
15.60
|
-5.50 |
-2.17 |
|
PPPVSMPTT |
16.00
|
-6.37 |
-3.04 |
| Q12168 |
VPNRPGGTT |
14.20
|
-5.90 |
-2.57 |
|
QHPVPKPNI |
14.21
|
-6.67 |
-3.34 |
|
RGPPPLPPR |
14.53
|
-9.20 |
-5.86 |
| Q03780 |
PPPPMDMKS |
15.13
|
-7.79 |
-4.46 |
|
PPPPPMDMK |
16.39
|
-8.04 |
-4.70 |
|
PPRSPNRNA |
17.63
|
-7.96 |
-4.63 |
| P48582 |
RNTPPQPSL |
9.39
|
-9.60 |
-6.26 |
|
PPLPPLDSK |
15.00
|
-6.98 |
-3.65 |
|
SDLPQGPGI |
15.62
|
-5.96 |
-2.63 |
| P53933 |
PPPIPSTQK |
14.96
|
-5.77 |
-2.43 |
|
PPPPPIPST |
15.60
|
-7.74 |
-4.41 |
|
PPPLPNRQL |
17.00
|
-9.20 |
-5.86 |
| Q08229 |
RPLPSTPNE |
12.25
|
-8.49 |
-5.16 |
|
TPVQPGGHY |
12.90
|
-8.10 |
-4.76 |
|
PVQPGGHYK |
13.72
|
-5.62 |
-2.29 |
| P33338 |
RTPARTPTP |
14.38
|
-9.37 |
-6.03 |
|
RTPTPTPPV |
14.84
|
-7.49 |
-4.16 |
| P32893 |
NGTIPNSPL |
16.71
|
-4.70 |
-1.37 |
| Q12446 |
RPLPQLPNR |
11.31
|
-11.17 |
-7.84 |
|
PPPPPHRHV |
12.94
|
-8.13 |
-4.80 |
|
FPIPEIPST |
13.47
|
-7.22 |
-3.88 |
| P39940 |
WDDPRLPSS |
14.90
|
-5.62 |
-2.29 |
| P38266 |
PPKPFRRSQ |
11.75
|
-9.33 |
-6.00 |
|
PRPPPSRSS |
13.57
|
-7.41 |
-4.08 |
|
RKRAPTPPA |
13.94
|
-9.95 |
-6.61 |
| P40483 |
PSVPPRNYF |
16.32
|
-6.54 |
-3.21 |
| P40563 |
NSQPQGPSD |
14.05
|
-6.17 |
-2.84 |
|
RAPPPVPKK |
14.22
|
-9.43 |
-6.09 |
|
PSERPKRRA |
16.78
|
-5.35 |
-2.01 |
| Q07533 |
PHFPYGTWK |
12.57
|
-7.16 |
-3.83 |
|
IPPVPSRYS |
13.45
|
-6.38 |
-3.04 |
|
PPVPSRYSD |
14.63
|
-7.72 |
-4.38 |
| Q04195 |
RGNEPIQFP |
14.26
|
-8.61 |
-5.27 |
|
NEPIQFPFP |
14.93
|
-6.95 |
-3.62 |
|
PQNVPIRTN |
14.95
|
-6.56 |
-3.22 |
| P43582 |
WPRPKGPPP |
14.62
|
-10.44 |
-7.10 |
|
