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Matrix information:
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ADAN-name: LSB1_1CKB-15.PDB
Scoring matrix: LSB1_1CKB-15_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 18.63
Foldx random average score for Saccharomyces cerevisiae: 13.919 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3207309
Proteins after random average filtering: 7178
Total fragments: 1577816
Proteins after disorder filtering: 4393
Total fragments: 63045
Proteins after pattern filtering: 2024
Total fragments: 8322
Proteins after MINT filtering: 28
Total fragments: 278
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
18.63
|
-2.46 |
0.00 |
| Best peptides |
RPFVIIKDL |
0.00
|
-7.14 |
-4.68 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
RVKPAPPVS |
9.70
|
-6.46 |
-4.00 |
|
KPAPPVSRS |
11.09
|
-5.40 |
-2.95 |
|
LLPTRPNKA |
11.25
|
-4.55 |
-2.09 |
| P53120 |
YEPECPVAY |
12.64
|
-4.56 |
-2.10 |
|
RSYEPECPV |
13.80
|
-6.34 |
-3.88 |
| Q04322 |
QAPLDRPQL |
11.77
|
-6.52 |
-4.06 |
|
TPPTLPPRR |
11.82
|
-6.36 |
-3.91 |
|
PPTLPPRRI |
12.73
|
-9.30 |
-6.85 |
| Q12168 |
QHPVPKPNI |
10.84
|
-4.95 |
-2.50 |
|
HPVPKPNID |
11.83
|
-4.68 |
-2.22 |
|
RGPPPLPPR |
11.92
|
-9.50 |
-7.04 |
| P53169 |
NSVPIMPTL |
9.47
|
-5.52 |
-3.06 |
|
SPAQPSASL |
12.42
|
-5.46 |
-3.00 |
|
YSPAQPSAS |
13.38
|
-2.86 |
-0.40 |
| Q12344 |
SPPLPPRQN |
13.28
|
-7.10 |
-4.64 |
|
TSPKLPPRG |
13.64
|
-4.68 |
-2.22 |
|
PLPPRQNVA |
13.66
|
-3.74 |
-1.29 |
| Q07533 |
KSPKAYPKL |
7.73
|
-6.41 |
-3.96 |
|
PPLPPLPDL |
9.57
|
-8.99 |
-6.54 |
|
NPLPPLPPL |
10.56
|
-8.71 |
-6.26 |
| P53238 |
RPIPPAPTH |
11.15
|
-7.63 |
-5.17 |
|
IPPAPTHYN |
13.25
|
-5.11 |
-2.66 |
|
PIPPAPTHY |
13.69
|
-4.58 |
-2.13 |
| P08417 |
LPENEPGSS |
12.47
|
-4.57 |
-2.12 |
| P39521 |
VPDRPPSQL |
8.46
|
-8.23 |
-5.78 |
|
PKPKPAQDN |
11.82
|
-4.17 |
-1.71 |
|
VQTPHVPDR |
12.60
|
-4.31 |
-1.85 |
| P04050 |
PPPVRPSIS |
10.01
|
-6.53 |
-4.08 |
|
LPVPPPPVR |
11.58
|
-7.57 |
-5.12 |
|
PPVRPSISF |
11.64
|
-4.49 |
-2.04 |
| P40453 |
RPPPPPPVS |
8.38
|
-9.31 |
-6.86 |
|
PPSWKPPDL |
8.74
|
-7.16 |
-4.71 |
|
KPPDLPIRL |
9.03
|
-7.20 |
-4.75 |
| P19812 |
RPRRIPPTD |
6.89
|
-8.95 |
-6.49 |
|
APQNPPPIL |
9.70
|
-7.14 |
-4.68 |
|
HSPIFRPGN |
11.21
|
-4.24 |
-1.79 |
| Q03780 |
RPPPPPMDM |
6.32
|
-10.92 |
-8.46 |
|
IPPRSPNRN |
10.18
|
-6.47 |
-4.01 |
|
RSRPPPPPM |
10.75
|
-7.07 |
-4.62 |
| P48582 |
RNTPPQPSL |
7.16
|
-9.38 |
-6.93 |
|
APPVPPKQS |
10.29
|
-6.47 |
-4.01 |
|
NTPPQPSLL |
10.51
|
-5.63 |
-3.17 |
| P53933 |
RRRPPPPPI |
9.73
|
-10.86 |
-8.40 |
|
RRPPPPPIP |
10.02
|
-6.20 |
-3.75 |
|
RPPPPPIPS |
10.29
|
-9.54 |
-7.08 |
| Q08229 |
RPLPSTPNE |
10.22
|
-7.36 |
-4.91 |
|
NPTIPPRSK |
10.30
|
-6.81 |
-4.35 |
|
YNPTIPPRS |
10.79
|
-4.68 |
-2.22 |
| P33338 |
RTPTPTPPV |
11.55
|
-8.25 |
-5.79 |
|
TPARTPART |
12.10
|
-6.88 |
-4.42 |
|
RTPARTPTP |
12.13
|
-6.63 |
-4.17 |
| P32893 |
NGTIPNSPL |
12.30
|
-5.28 |
-2.83 |
|
NNGTIPNSP |
13.87
|
-3.30 |
-0.84 |
| Q12446 |
RPLPQLPNR |
7.71
|
-10.20 |
-7.74 |
|
QPAVPLPQN |
9.17
|
-6.99 |
-4.54 |
|
RPVPPPPPM |
9.50
|
-11.49 |
-9.04 |
| P40483 |
KPSVPPRNY |
8.13
|
-7.53 |
-5.08 |
|
PSVPPRNYF |
13.80
|
-3.49 |
-1.04 |
| P39940 |
DDPRLPSSL |
12.57
|
-5.45 |
-3.00 |
| P38266 |
KPPVVPKKK |
7.16
|
-7.96 |
-5.50 |
|
QPPVPVRMQ |
8.84
|
-7.76 |
-5.30 |
|
VPPVVPKKN |
8.86
|
-6.89 |
-4.43 |
| Q04659 |
KDPTVPNGL |
10.70
|
-6.46 |
-4.00 |
| P40563 |
RAPPPVPKK |
9.15
|
-8.51 |
-6.05 |
|
NPGQLPPSL |
9.27
|
-6.38 |
-3.92 |
|
RRAPPPVPK |
11.22
|
-8.25 |
-5.79 |
| P00812 |
DVPHCPESL |
12.73
|
-4.86 |
-2.41 |
|
NKDVPHCPE |
13.63
|
-4.00 |
-1.54 |
| Q04195 |
NSTPVLPTL |
9.94
|
-5.31 |
-2.85 |
|
HPSEPIIIN |
10.78
|
-5.73 |
-3.28 |
|
PQNVPIRTN |
10.85
|
-7.07 |
-4.62 |
| P43582 |
RPKGPPPGV |
10.63
|
-8.24 |
-5.79 |
|
NPPQVPSGW |
11.21
|
-5.24 |
-2.79 |
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