|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-12.PDB
Scoring matrix: LSB1_1CKB-12_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.47
Foldx random average score for Saccharomyces cerevisiae: 9.958 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214487
Proteins after random average filtering: 7178
Total fragments: 1300186
Proteins after disorder filtering: 4538
Total fragments: 76073
Proteins after pattern filtering: 2230
Total fragments: 13227
Proteins after MINT filtering: 26
Total fragments: 497
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
12.47
|
-0.87 |
0.00 |
| Best peptides |
RRFRPFWR |
0.00
|
-3.42 |
-2.55 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
PSPPAKRI |
4.55
|
-4.65 |
-3.78 |
|
FEKGPRMP |
5.53
|
-3.29 |
-2.42 |
|
SSPPPLPT |
5.75
|
-5.26 |
-4.39 |
| P53120 |
YEPECPVA |
9.61
|
-1.92 |
-1.05 |
|
RSYEPECP |
9.64
|
-1.52 |
-0.65 |
| Q04322 |
QAPLDRPQ |
6.43
|
-3.72 |
-2.85 |
|
STPPTLPP |
6.48
|
-5.00 |
-4.13 |
|
TSPPLPPR |
7.29
|
-3.58 |
-2.71 |
| P19812 |
HSPIFRPG |
5.34
|
-3.82 |
-2.95 |
|
PRPRRIPP |
5.43
|
-4.76 |
-3.89 |
|
DHSPIFRP |
6.26
|
-3.95 |
-3.08 |
| P53169 |
PIMPTLPP |
7.44
|
-5.78 |
-4.91 |
|
IMPTLPPR |
7.92
|
-1.82 |
-0.95 |
|
SVPIMPTL |
8.78
|
-2.36 |
-1.49 |
| Q12344 |
PLPPRQNV |
6.44
|
-4.26 |
-3.39 |
|
TSPKLPPR |
7.16
|
-3.55 |
-2.68 |
|
SSPPLPPR |
7.31
|
-3.60 |
-2.73 |
| Q07533 |
SSPKSPKA |
6.82
|
-3.34 |
-2.47 |
|
KSPKAYPK |
6.91
|
-3.80 |
-2.93 |
|
KSDPHFPY |
7.10
|
-3.42 |
-2.55 |
| P53238 |
QKPAGRPI |
5.83
|
-4.27 |
-3.40 |
|
GRPIPPAP |
7.25
|
-3.43 |
-2.56 |
|
PIPPAPTH |
8.64
|
-3.25 |
-2.38 |
| P39521 |
AQPKPKPA |
5.41
|
-5.15 |
-4.28 |
|
PKPKPAQD |
8.02
|
-1.60 |
-0.73 |
|
DAQPKPKP |
8.12
|
-3.09 |
-2.22 |
| P04050 |
PAYSPKQD |
6.39
|
-3.63 |
-2.76 |
|
PPPPVRPS |
6.87
|
-5.13 |
-4.26 |
|
VPPPPVRP |
7.55
|
-3.28 |
-2.41 |
| P40453 |
PEPPSWKP |
4.96
|
-5.29 |
-4.42 |
|
WKPPDLPI |
5.37
|
-5.24 |
-4.37 |
|
EIPPPLPP |
5.62
|
-5.17 |
-4.30 |
| Q12168 |
PYFPQFRS |
2.83
|
-5.54 |
-4.67 |
|
RGPPPLPP |
5.93
|
-4.55 |
-3.68 |
|
QHPVPKPN |
6.76
|
-2.86 |
-1.99 |
| Q03780 |
SRPPPPPM |
6.54
|
-3.82 |
-2.95 |
|
PRSPNRNA |
7.38
|
-2.69 |
-1.82 |
|
RSRPPPPP |
7.87
|
-3.23 |
-2.36 |
| P48582 |
GGPPLLPQ |
6.55
|
-5.04 |
-4.17 |
|
PVPPKQSQ |
7.08
|
-4.37 |
-3.50 |
|
PAPPLPPL |
8.15
|
-3.47 |
-2.60 |
| Q04659 |
KDPTVPNG |
9.82
|
-1.92 |
-1.05 |
| P53933 |
DLPMELPH |
5.96
|
-5.64 |
-4.77 |
|
VAPPPLPN |
6.04
|
-5.23 |
-4.36 |
|
RRPPPPPI |
6.45
|
-4.06 |
-3.19 |
| Q08229 |
YNPTIPPR |
8.68
|
-2.28 |
-1.41 |
|
TRPLPSTP |
8.96
|
-2.16 |
-1.29 |
|
DYNPTIPP |
9.01
|
-3.01 |
-2.14 |
| P33338 |
ARTPARTP |
8.21
|
-3.14 |
-2.27 |
|
SWSGPLTP |
8.58
|
-2.44 |
-1.57 |
|
RTPTPTPP |
8.89
|
-2.32 |
-1.45 |
| P43582 |
TWPRPKGP |
4.87
|
-4.47 |
-3.60 |
|
PRPKGPPP |
6.87
|
-3.24 |
-2.37 |
|
KSNPPQVP |
8.14
|
-2.50 |
-1.63 |
| P39940 |
DDPRLPSS |
8.37
|
-2.17 |
-1.30 |
|
TWDDPRLP |
8.50
|
-3.07 |
-2.20 |
|
WDDPRLPS |
8.53
|
-1.87 |
-1.00 |
| P38266 |
PPPKPFRR |
3.88
|
-5.39 |
-4.52 |
|
PPPKPFRH |
4.26
|
-5.07 |
-4.20 |
|
IMPPPKPF |
4.80
|
-4.48 |
-3.61 |
| P40483 |
DAPASKPS |
6.97
|
-2.46 |
-1.59 |
|
SKPSVPPR |
7.61
|
-2.77 |
-1.90 |
|
PSVPPRNY |
8.74
|
-5.03 |
-4.16 |
| P40563 |
PSERPKRR |
4.05
|
-4.56 |
-3.69 |
|
PPPVPKKP |
6.87
|
-2.71 |
-1.84 |
|
VNPGQLPP |
7.00
|
-4.24 |
-3.37 |
| P00812 |
VDPLYIPA |
8.58
|
-2.63 |
-1.76 |
|
PLYIPATG |
8.79
|
-2.75 |
-1.88 |
|
NKDVPHCP |
9.32
|
-3.12 |
-2.25 |
| Q04195 |
NEPIQFPF |
4.16
|
-5.35 |
-4.48 |
|
GNEPIQFP |
8.00
|
-2.67 |
-1.80 |
|
RAPPPTNP |
8.68
|
-2.80 |
-1.93 |
| Q12446 |
PPPPPRRG |
4.98
|
-4.98 |
-4.11 |
|
PPPPPHRH |
5.18
|
-5.81 |
-4.94 |
|
PPPPPMRT |
5.64
|
-5.85 |
-4.98 |
|
