|
Matrix information:
(Help)
ADAN-name: LSB1_1CKB-11.PDB
Scoring matrix: LSB1_1CKB-11_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 15.06
Foldx random average score for Saccharomyces cerevisiae: 12.477 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3221665
Proteins after random average filtering: 7178
Total fragments: 1242595
Proteins after disorder filtering: 4650
Total fragments: 84133
Proteins after pattern filtering: 2269
Total fragments: 13306
Proteins after MINT filtering: 27
Total fragments: 499
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
15.06
|
-1.60 |
0.00 |
| Best peptides |
YPPKHPF |
0.00
|
-6.95 |
-5.35 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
GPRMPSR |
7.72
|
-8.04 |
-6.44 |
|
PPPLPTR |
8.17
|
-8.88 |
-7.28 |
|
LPTRPNK |
8.21
|
-7.64 |
-6.04 |
| P53120 |
EPECPVA |
10.89
|
-6.25 |
-4.65 |
|
YEPECPV |
11.64
|
-5.86 |
-4.26 |
| Q04322 |
SPPLPPR |
8.09
|
-8.32 |
-6.72 |
|
PPTLPPR |
8.20
|
-9.48 |
-7.88 |
|
PLDRPQL |
9.04
|
-7.13 |
-5.53 |
| P19812 |
PRPRRIP |
7.37
|
-5.34 |
-3.74 |
|
RPRRIPP |
8.38
|
-11.83 |
-10.23 |
|
PRRIPPT |
8.50
|
-7.84 |
-6.24 |
| P53169 |
VPIMPTL |
7.18
|
-6.70 |
-5.10 |
|
MPTLPPR |
7.69
|
-9.48 |
-7.88 |
|
SPAQPSA |
9.81
|
-6.16 |
-4.56 |
| Q12344 |
SPPLPPR |
8.09
|
-8.32 |
-6.72 |
|
SPKLPPR |
8.34
|
-7.88 |
-6.28 |
|
PPLPPRQ |
9.42
|
-7.74 |
-6.14 |
| Q07533 |
IPPVPSR |
7.28
|
-7.17 |
-5.57 |
|
LPPLPPL |
7.48
|
-8.71 |
-7.11 |
|
LPPLPDL |
8.03
|
-8.41 |
-6.81 |
| P53238 |
IPPAPTH |
8.24
|
-6.91 |
-5.31 |
|
RPIPPAP |
8.24
|
-8.35 |
-6.75 |
|
GRPIPPA |
8.71
|
-7.10 |
-5.50 |
| P39521 |
VPDRPPS |
8.50
|
-6.39 |
-4.79 |
|
TPHVPDR |
8.56
|
-6.26 |
-4.66 |
|
PKPKPAQ |
8.94
|
-7.11 |
-5.51 |
| P04050 |
APTSPGF |
6.99
|
-5.84 |
-4.24 |
|
PPVRPSI |
7.59
|
-7.82 |
-6.22 |
|
PPPVRPS |
7.96
|
-7.02 |
-5.42 |
| P40453 |
RPPPPPP |
7.29
|
-9.10 |
-7.50 |
|
PPPLPPK |
7.64
|
-8.79 |
-7.19 |
|
TPEIPPP |
8.24
|
-7.38 |
-5.78 |
| Q12168 |
PPPLPPR |
7.57
|
-8.54 |
-6.94 |
|
DPYFPQF |
7.65
|
-7.74 |
-6.14 |
|
PVPKPNI |
7.69
|
-7.29 |
-5.69 |
| Q03780 |
RPPPPPM |
6.37
|
-9.27 |
-7.67 |
|
APDIPPR |
7.10
|
-7.86 |
-6.26 |
|
RSRPPPP |
8.57
|
-7.16 |
-5.56 |
| P48582 |
APPLPPL |
7.17
|
-8.17 |
-6.57 |
|
APPVPPK |
7.35
|
-8.08 |
-6.48 |
|
TPPQPSL |
7.44
|
-6.09 |
-4.49 |
| P53933 |
RPPPPPI |
6.71
|
-8.83 |
-7.23 |
|
RRPPPPP |
7.38
|
-9.19 |
-7.59 |
|
RRRPPPP |
7.56
|
-9.37 |
-7.77 |
| Q08229 |
NPTIPPR |
7.64
|
-7.92 |
-6.32 |
|
TPVQPGG |
9.67
|
-5.88 |
-4.28 |
|
YNPTIPP |
10.17
|
-7.01 |
-5.41 |
| P33338 |
RTPTPTP |
8.96
|
-7.18 |
-5.58 |
|
RTPARTP |
9.27
|
-7.90 |
-6.30 |
|
PTPTPPV |
9.83
|
-6.45 |
-4.85 |
| P32893 |
TIPNSPL |
10.90
|
-3.25 |
-1.65 |
|
GTIPNSP |
11.84
|
-4.00 |
-2.40 |
| P43582 |
RPKGPPP |
9.34
|
-8.03 |
-6.43 |
|
WPRPKGP |
9.41
|
-5.66 |
-4.06 |
|
PPQVPSG |
9.56
|
-8.00 |
-6.40 |
| P40483 |
KPSVPPR |
7.66
|
-8.78 |
-7.18 |
|
PASKPSV |
9.61
|
-5.90 |
-4.30 |
|
PSVPPRN |
11.20
|
-5.82 |
-4.22 |
| P39940 |
WDDPRLP |
9.96
|
-4.82 |
-3.22 |
|
PRLPSSL |
10.66
|
-4.49 |
-2.89 |
|
DPRLPSS |
10.70
|
-6.15 |
-4.55 |
| P38266 |
MPPPKPF |
5.87
|
-6.43 |
-4.83 |
|
FPPPPLK |
6.67
|
-8.46 |
-6.86 |
|
LPPPKPF |
6.70
|
-7.58 |
-5.98 |
| Q04659 |
PTVPNGL |
10.15
|
-4.90 |
-3.30 |
|
DPTVPNG |
11.05
|
-6.44 |
-4.84 |
| P40563 |
PPPVPKK |
7.71
|
-8.20 |
-6.60 |
|
PSERPKR |
8.70
|
-5.75 |
-4.15 |
|
TPNVPTR |
8.84
|
-6.24 |
-4.64 |
| P00812 |
KDVPHCP |
9.71
|
-5.61 |
-4.01 |
|
PLYIPAT |
10.41
|
-6.68 |
-5.08 |
|
VPHCPES |
11.11
|
-5.75 |
-4.15 |
| Q04195 |
EPIQFPF |
8.48
|
-5.65 |
-4.05 |
|
TPVLPTL |
8.60
|
-5.70 |
-4.10 |
|
PIQFPFP |
9.87
|
-6.62 |
-5.02 |
| Q12446 |
PPPPHRH |
5.78
|
-7.37 |
-5.77 |
|
PPPPPAF |
5.91
|
-7.41 |
-5.81 |
|
APPPPPH |
6.90
|
-8.17 |
-6.57 |
|
